| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF036J24 | Sequence | 505 | 001734 (4) | ref|XP_006363581.1| | 1e-56 | PREDICTED: COBRA-like protein 7-like [Solanum tuberosum] | 684 | 001219 (4) | ref|XP_006363581.1| | 2e-69 | PREDICTED: COBRA-like protein 7-like [Solanum tuberosum] |
| JMFF046F16 | Sequence | 460 | 001734 (4) | ref|XP_006363581.1| | 4e-49 | PREDICTED: COBRA-like protein 7-like [Solanum tuberosum] | 383 | 001219 (4) | emb|CDO98803.1| | 2e-12 | unnamed protein product [Coffea canephora] |
| JMFF047C17 | Sequence | 488 | 001734 (4) | ref|XP_006363581.1| | 1e-53 | PREDICTED: COBRA-like protein 7-like [Solanum tuberosum] | 373 | 001219 (4) | |||
| JMSF043G05 | Sequence | 748 | 001734 (4) | ref|XP_006363581.1| | 1e-117 | PREDICTED: COBRA-like protein 7-like [Solanum tuberosum] | 786 | 001219 (4) | ref|XP_006363581.1| | 4e-89 | PREDICTED: COBRA-like protein 7-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF043G05+ GNTAAGTTGCCA
____________________________________________________________
consensus GNTAAGTTGCCA
. : . : . : . : . : . :
JMSF043G05+ GTTGTCAAGACGCCCGAGCGGGTTATGGTTCGCAATGGTGACCTGCGCCCAGTAATTCGA
____________________________________________________________
consensus GTTGTCAAGACGCCCGAGCGGGTTATGGTTCGCAATGGTGACCTGCGCCCAGTAATTCGA
. : . : . : . : . : . :
JMSF043G05+ ATCATATGATCTCGTGATATCATACATAATTGTTAGATCACCATCTCTACGAGGAAGGAA
____________________________________________________________
consensus ATCATATGATCTCGTGATATCATACATAATTGTTAGATCACCATCTCTACGAGGAAGGAA
. : . : . : . : . : . :
JMSF043G05+ TTCCTCATCTTTGGTCAGATTAGCCTTGAATTTCGGGTCTTTTGTACAGCACACCATCAT
____________________________________________________________
consensus TTCCTCATCTTTGGTCAGATTAGCCTTGAATTTCGGGTCTTTTGTACAGCACACCATCAT
. : . : . : . : . : . :
JMSF043G05+ TGTACTGTTTCCTTGCATTGAGGGTTTAGGACAAATGAAGCCGTCATTGACGAGCGAGAT
____________________________________________________________
consensus TGTACTGTTTCCTTGCATTGAGGGTTTAGGACAAATGAAGCCGTCATTGACGAGCGAGAT
. : . : . : . : . : . :
JMSF043G05+ GTTGGACGGCATGGGAGCGTTTCCTCGGCCGACGCCGAACTGGGTTCCGACCAACTCAAC
JMFF047C17+ GACCAACTCAAC
JMFF036J24+ CGAACTGGGTTCCGACCAACTCAAC
____________________________________________________________
consensus GTTGGACGGCATGGGAGCGTTTCCTCGGCCGACGCCGAACTGGGTTCCGACCAACTCAAC
. : . : . : . : . : . :
JMSF043G05+ CCGAGCACTCGTCTGGGTCGAATCGCCGGCGGTCTCGATCGCAGTCTTCAGATCCGAGTT
JMFF047C17+ CCGAGCACTCGTCTGGGTCGAATCGCCGGCGGTCTCGATCGCAGTCTTCAGATCCGAGTT
JMFF046F16+ GTCGAATCGCCGGCGGTCTCGATCGCAGTCTTCAGATCCGAGTT
JMFF036J24+ CCGAGCACTCGTCTGGGTCGAATCGCCGGCGGTCTCGATCGCAGTCTTCAGATCCGAGTT
____________________________________________________________
consensus CCGAGCACTCGTCTGGGTCGAATCGCCGGCGGTCTCGATCGCAGTCTTCAGATCCGAGTT
. : . : . : . : . : . :
JMSF043G05+ GGGGAACCCGGCAAAAACAGTCCCATTGCCCACCGCCGCCGGGAGCGACGTCCCGTCGTC
JMFF047C17+ GGGGAACCCGGCAAAAACAGTCCCATTGCCCACCGCCGCCGGGAGCGACGTCCCGTCGTC
JMFF046F16+ GGGGAACCCGGCAAAAACAGTCCCATTGCCCACCGCCGCCGGGAGCGACGTCCCGTCGTC
JMFF036J24+ GGGGAACCCGGCAAAAACAGTCCCATTGCCCACCGCCGCCGGGAGCGACGTCCCGTCGTC
____________________________________________________________
consensus GGGGAACCCGGCAAAAACAGTCCCATTGCCCACCGCCGCCGGGAGCGACGTCCCGTCGTC
. : . : . : . : . : . :
JMSF043G05+ GAGCACGGAGTTGGAGGCGGAGACGAGGAACTCATCGTGCTGGAATCCGACGAAGACCCG
JMFF047C17+ GAGCACGGAGTTGGAGGCGGAGACGAGGAACTCATCGTGCTGGAATCCGACGAAGACCCG
JMFF046F16+ GAGCACGGAGTTGGAGGCGGAGACGAGGAACTCATCGTGCTGGAATCCGACGAAGACCCG
JMFF036J24+ GAGCACGGAGTTGGAGGCGGAGACGAGGAACTCATCGTGCTGGAATCCGACGAAGACCCG
____________________________________________________________
consensus GAGCACGGAGTTGGAGGCGGAGACGAGGAACTCATCGTGCTGGAATCCGACGAAGACCCG
. : . : . : . : . : . :
JMSF043G05+ CCACAACTTGAGCTCGTCGACGCCGTTGTTGACGATACTAAGAGCGGACTCAAATCGGTA
JMFF047C17+ CCACAACTTGAGCTCGTCGACGCCGTTGTTGACGATACTAAGAGCGGACTCAAATCGGTA
JMFF046F16+ CCACAACTTGAGCTCGTCGACGCCGTTGTTGACGATACTAAGAGCGGACTCAAATCGGTA
JMFF036J24+ CCACAACTTGAGCTCGTCGACGCCGTTGTTGACGATACTAAGAGCGGACTCAAATCGGTA
____________________________________________________________
consensus CCACAACTTGAGCTCGTCGACGCCGTTGTTGACGATACTAAGAGCGGACTCAAATCGGTA
. : . : . : . : . : . :
JMSF043G05+ GGGCTGGCGGGTCTTCACAGTGGGCTTAAGAATGGACCCGGAACTGTACACGTACTGCAA
JMFF047C17+ GGGCTGGCGGGTCTTCACAGTGGGCTTAAGAATGGACCCGGAACTGTACACGTACTGCAA
JMFF046F16+ GGGCTGGCGGGTCTTCACAGTGGGCTTAAGAATGGACCCGGAACTGTACACGTACTGCAA
JMFF036J24+ GGGCTGGCGGGTCTTCACAGTGGGCTTAAGAATGGACCCGGAACTGTACACGTACTGCAA
____________________________________________________________
consensus GGGCTGGCGGGTCTTCACAGTGGGCTTAAGAATGGACCCGGAACTGTACACGTACTGCAA
. : . : . : . : . : . :
JMSF043G05+ GAAGATGCCGTTACAATCGTCGGCCGGAGATGGAGGCTCCGCCGCCAGCGGCGGAGATTT
JMFF047C17+ GAAGATGCCGTTACAATCGTCGGCCGGAGATGGAGGCTCCGCCGCCAGCGGCGGAGATTT
JMFF046F16+ GAAGATGCCGTTACAATCGTCGGCCGGAGATGGAGGCTCCGCCGCCAGCGGCGGAGATTT
JMFF036J24+ GAAGATGCCGTTACAATCGTCGGCCGGAGATGGAGGCTCCGCCGCCAGCGGCGGAGATTT
____________________________________________________________
consensus GAAGATGCCGTTACAATCGTCGGCCGGAGATGGAGGCTCCGCCGCCAGCGGCGGAGATTT
. : . : . : . : . : . :
JMSF043G05+ CTGGGCCTGCGCAAAATGGATTGGAACGCTTAGAAGAAGAAGAGGGAGGAAGAGGAAGAG
JMFF047C17+ CTGGGCCTGCGCAAAATGGATTGGAACGCTTAGAAGAAGAAGAGGGAGGAAGAGGAAGAG
JMFF046F16+ CTGGGCCTGCGCAAAATGGATTGGAACGCTTAGAAGAAGAAGAGGGAGGAAGAGGAAGAG
JMFF036J24+ CTGGGCCTGCGCAAAATGGATTGGAACGCTTAGAAGAAGAAGAGGGAGGAAGAGGAAGAG
____________________________________________________________
consensus CTGGGCCTGCGCAAAATGGATTGGAACGCTTAGAAGAAGAAGAGGGAGGAAGAGGAAGAG
. : . : . : . : . : . :
JMSF043G05+ GGAGAAAGCAGCCAT
JMFF047C17+ GGAGAAAGCAGCCATGATCTCTTGAATCTACTTTCCTGAAACTGAATTCAAAATCA
JMFF046F16+ GGAGAAAGCAGCCATGATCTCTTGAATCTACTTTCCTGAAACTGAATTCAAAATCA
JMFF036J24+ GGAGAAAGCAGCCATGATCTCTTGAATCTACTTTCCTGAAACTGAATTCAAAATCAAGAG
____________________________________________________________
consensus GGAGAAAGCAGCCATGATCTCTTGAATCTACTTTCCTGAAACTGAATTCAAAATCAAGAG