Contig 001733:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007M03Sequence495001733 (4)ref|XP_009792753.1|2e-37PREDICTED: serine acetyltransferase 2-like [Nicotiana sylvestris]828013625 (2)ref|XP_004232554.1|6e-64PREDICTED: serine acetyltransferase 2-like [Solanum lycopersicum]
JMFF009G15Sequence541001733 (4)ref|XP_009792753.1|7e-61PREDICTED: serine acetyltransferase 2-like [Nicotiana sylvestris]731017994ref|XP_004232554.1|1e-39PREDICTED: serine acetyltransferase 2-like [Solanum lycopersicum]
JMFF036F12Sequence495001733 (4)ref|XP_009792753.1|2e-37PREDICTED: serine acetyltransferase 2-like [Nicotiana sylvestris]727013625 (2)emb|CDP01810.1|3e-42unnamed protein product [Coffea canephora]
JMSF008A21Sequence275001733 (4)732021371ref|XP_004232554.1|2e-74PREDICTED: serine acetyltransferase 2-like [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF009G15+                                                  TATATCCATTCGAATGGAACG
                      ____________________________________________________________
consensus                                                    TATATCCATTCGAATGGAACG
 
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JMFF009G15+           TTGGATCCCTCGATCATGCAACATTACACCACAGAATATGTCCGACAACTGTGTTGCCAA
                      ____________________________________________________________
consensus             TTGGATCCCTCGATCATGCAACATTACACCACAGAATATGTCCGACAACTGTGTTGCCAA
 
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JMFF009G15+           AAGCGTGGGATTTTGCAGCCGGTTCGCAAGAACAAAACCTAACGCCTGCTCCAGGCAATT
JMFF007M03+                                                        CTGCTCCAGGCAATT
JMFF036F12+                                                        CTGCTCCAGGCAATT
                      ____________________________________________________________
consensus             AAGCGTGGGATTTTGCAGCCGGTTCGCAAGAACAAAACCTAACGCCTGCTCCAGGCAATT
 
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JMFF009G15+           GTGCGACAAAATACTCGCATATAGAAAGCTACTCAATATGGGCTCCTTCTCTACCTCTGA
JMFF007M03+           GTGCGACAAAATACTCGCATATAGAAAGCTACTCAATATGGGCTCCTTCTCTACCTCTGA
JMFF036F12+           GTGCGACAAAATACTCGCATATAGAAAGCTACTCAATATGGGCTCCTTCTCTACCTCTGA
                      ____________________________________________________________
consensus             GTGCGACAAAATACTCGCATATAGAAAGCTACTCAATATGGGCTCCTTCTCTACCTCTGA
 
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JMFF009G15+           CTTGGCTTCTTCTCGAACGGCATCCCATATAGGGTCGCCAACTCCCCTACCCGAATTGGC
JMFF007M03+           CTTGGCTTCTTCTCGAACGGCATCCCATATAGGGTCGCCAACTCCCCTACCCGAATTGGC
JMFF036F12+           CTTGGCTTCTTCTCGAACGGCATCCCATATAGGGTCGCCAACTCCCCTACCCGAATTGGC
                      ____________________________________________________________
consensus             CTTGGCTTCTTCTCGAACGGCATCCCATATAGGGTCGCCAACTCCCCTACCCGAATTGGC
 
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JMFF009G15+           GAGCGAGACAACCAGGTTCGGGTCGGGTTCCGAAACTCCGACTGCGTAAACCGGGAAGAC
JMFF007M03+           GAGCGAGACAACCAGGTTCGGGTCGGGTTCCGAAACTCCGACTGCGTAAACCGGGAAGAC
JMFF036F12+           GAGCGAGACAACCAGGTTCGGGTCGGGTTCCGAAACTCCGACTGCGTAAACCGGGAAGAC
                      ____________________________________________________________
consensus             GAGCGAGACAACCAGGTTCGGGTCGGGTTCCGAAACTCCGACTGCGTAAACCGGGAAGAC
 
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JMFF009G15+           CTTCTCCAGCCGGAACTCAGCCATGGCCGGCGGCGGGGGGGTGGGCCCGTAGTTATCGGG
JMFF007M03+           CTTCTCCAGCCGGAACTCAGCCATGGCCGGCGGCGGGGGGGTGGGCCCGTAGTTATCGGG
JMSF008A21+            TTCTCCAGCCGGAACTCAGCCATGGCCGGCGGCGGGGGGGTGGGCCCGTAGTTATCGGG
JMFF036F12+           CTTCTCCAGCCGGAACTCAGCCATGGCCGGCGGCGGGGGGGTGGGCCCGTAGTTATCGGG
                      ____________________________________________________________
consensus             CTTCTCCAGCCGGAACTCAGCCATGGCCGGCGGCGGGGGGGTGGGCCCGTAGTTATCGGG
 
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JMFF009G15+           AGGGGTCTCCTCTTTGTTCCGGGTTGAGAGCATTTGGATGAGAGCAAAGCGAGTGTCGTT
JMFF007M03+           AGGGGTCTCCTCTTTGTTCCGGGTTGAGAGCATTTGGATGAGAGCAAAGCGAGTGTCGTT
JMSF008A21+           AGGGGTCTCCTCTTTGTTCCGGGTTGAGAGCATTTGGATGAGAGCAAAGCGAGTGTCGTT
JMFF036F12+           AGGGGTCTCCTCTTTGTTCCGGGTTGAGAGCATTTGGATGAGAGCAAAGCGAGTGTCGTT
                      ____________________________________________________________
consensus             AGGGGTCTCCTCTTTGTTCCGGGTTGAGAGCATTTGGATGAGAGCAAAGCGAGTGTCGTT
 
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JMFF009G15+           GCTCAAACAAGCCATATATGATATATCCAACCAAAATATTACGCGTGCGTTTACCTTGCT
JMFF007M03+           GCTCAAACAAGCCATATATGATATATCCAACCAAAATATTACGCGTGCGTTTACCTTGCT
JMSF008A21+           GCTCAAACAAGCCATATATGATATATCCAACCAAAATATTACGCGTGCGTTTACCTTGCT
JMFF036F12+           GCTCAAACAAGCCATATATGATATATCCAACCAAAATATTACGCGTGCGTTTACCTTGCT
                      ____________________________________________________________
consensus             GCTCAAACAAGCCATATATGATATATCCAACCAAAATATTACGCGTGCGTTTACCTTGCT
 
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JMFF009G15+           GCTATGACCTAGGGTTTCGCCATAGGATGCATGCAATTAT                    
JMFF007M03+           GCTATGACCTAGGGTTTCGCCATAGGATGCATGCAATTATGAAGTGGGAAGAGAGAGTGG
JMSF008A21+           GCTATGACCTAGGGTTTCGCCATAGGATGCATGCAATTATGAAGTGGGAAGAGAGAGTGG
JMFF036F12+           GCTATGACCTAGGGTTTCGCCATAGGATGCATGCAATTATGAAGTGGGAAGAGAGAGTGG
                      ____________________________________________________________
consensus             GCTATGACCTAGGGTTTCGCCATAGGATGCATGCAATTATGAAGTGGGAAGAGAGAGTGG
 
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JMFF007M03+           ATTGTATTGCAATGGTGTAGAAGATGATGATGATGAAGGATCATGATTCATGTGCAACAT
JMSF008A21+           ATTGTATTGCAATGGTGTAGAAGATGATGATGA                           
JMFF036F12+           ATTGTATTGCAATGGTGTAGAAGATGATGATGATGAAGGATCATGATTCATGTGCAACAT
                      ____________________________________________________________
consensus             ATTGTATTGCAATGGTGTAGAAGATGATGATGATGAAGGATCATGATTCATGTGCAACAT