Contig 001731:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020P14Sequence538001731 (5)gb|KJB63223.1|5e-38hypothetical protein B456_010G0665001, partial [Gossypium raimondii]725001731 (5)ref|XP_002284999.1|6e-46PREDICTED: EG45-like domain containing protein [Vitis vinifera] ref|XP_002284997
JMFF035M01Sequence512001731 (5)gb|KHG13671.1|2e-48EG45-like domain containing protein [Gossypium arboreum]615001731 (5)ref|XP_002284999.1|1e-28PREDICTED: EG45-like domain containing protein [Vitis vinifera] ref|XP_002284997
JMFN039D08Sequence612001731 (5)gb|KHG13671.1|7e-48EG45-like domain containing protein [Gossypium arboreum]

Alignment

This contig is upended


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rJMFF035M01-                       AATAACCAAACAAGTAACACAACTACAAAGTGAATACAAACAAATAT
rJMFF020P14-                         TAACCAAACAAGTAACACAACTACGAAGTGAATACAAACAAATAT
                      ____________________________________________________________
consensus                          AATAACCAAACAAGTAACACAACTACGAAGTGAATACAAACAAATAT
 
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rJMFF035M01-          TAAACGAACACAAACGAGCTTGTTCACGAACATTATTATACGAACACTAAACGAGCTTGT
rJMFF020P14-          TAAACGAACACAAACGAGCTTGTTCACGAACATTATTATACGAACACTAAACGAGCTTGT
                      ____________________________________________________________
consensus             TAAACGAACACAAACGAGCTTGTTCACGAACATTATTATACGAACACTAAACGAGCTTGT
 
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rJMFF035M01-          TCGTGAACATTATTAAACGAACACAAACGAGCTTGTTCACGATCTCTTAGCAAACGAGCT
rJMFF020P14-          TCGTGAACATTATTAAACGAACACAAACGAGCTTGTTCACGATCTCTTAGCAAACGAGCT
JMFN039D08+                                                          TAGCAAACGAGCT
                      ____________________________________________________________
consensus             TCGTGAACATTATTAAACGAACACAAACGAGCTTGTTCACGATCTCTTAGCAAACGAGCT
 
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rJMFF035M01-          TACAACTGTTCAGATTCTGTTCGTTTATAAATCGAGCTCTAAATTTTATTTGTTAATGTT
rJMFF020P14-          TACAACTGTTCAGATTCTGTTCGTTTATAAATCGAGCTCTAAATTTTATTTGTTAATGTT
JMFN039D08+           TACAACTGTTCAGATTCTGTTCGTTTATAAATCGAGCTCTAAATTTTATTTGTTAATGTT
                      ____________________________________________________________
consensus             TACAACTGTTCAGATTCTGTTCGTTTATAAATCGAGCTCTAAATTTTATTTGTTAATGTT
 
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rJMFF035M01-          CGTTTACCTTAATAAACGAACATAAACGAACACTTACCGAAAGCTCTGTTCGCTAACATG
rJMFF020P14-          CGTTTACCTTAATAAACGAACATAAACGAACACTTACCGAAAGCTCTGTTCGCTAACATG
JMFN039D08+           CGTTTACCTTAATAAACGAACATAAACGAACACTTACCGAAAGCTCTGTTCGCTAACATG
                      ____________________________________________________________
consensus             CGTTTACCTTAATAAACGAACATAAACGAACACTTACCGAAAGCTCTGTTCGCTAACATG
 
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rJMFF035M01-          GCGAATCGCCCCCACTAAATGAAATTTCTGACTTCACCCC-TACCAACAAACCAAAATA-
rJMFF020P14-          GCGAATCGCCCCCACTAAATGAAATTTCTGACTTCACCCC-TACCAACAAACCAAAATA-
JMFN039D08+           GCGAATCGCCCCCACTAAATGAAATTTCTGACTTCACCCC-TACCAACAAACCAAAATA-
JMFF020P14+             GAATCGCCCCCACTAAATGAAATTTCTGACTTCACCCCTTACCAACAAACCAAAATAT
JMFF035M01+                                    TTCTGACTTCA-CCCNTACCAACAAACCAAAATA-
                      ____________________________________________________________
consensus             GCGAATCGCCCCCACTAAATGAAATTTCTGACTTCACCCC-TACCAACAAACCAAAATA-
 
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rJMFF035M01-          TTTTTGTTGTTTATACCTGTTGAAACTCAATGTTGATAGAATCAGCGAGAGCATCCGCAA
rJMFF020P14-          TTTTTGTTGTTTATACCTGTTGAAACTCAATGTTGATAGAATCAGCGAGAGCATCCGCAA
JMFN039D08+           TTTTCGTTGTTTATACCTGTTGAAACTCAATGTTGATAGAATCAGCGAGAGCATCCGCAA
JMFF020P14+           TTTTTGTTGTTTATACCTGTTGAAACTCAATGTTGATAGAATCAGCGAGAGCATCCGCAA
JMFF035M01+           TTTTTGTTGTTTATACCTGTTGAAACTCAATGTTGATAGAATCAGCGAGAGCATCCGCAA
                      ____________________________________________________________
consensus             TTTTTGTTGTTTATACCTGTTGAAACTCAATGTTGATAGAATCAGCGAGAGCATCCGCAA
 
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rJMFF035M01-          TAAGTCCGAAGGCCTCATCGGACAAAACAATGGTGGTGCCGGACGAAGACGGCGTGGACA
rJMFF020P14-          TAAGTCCGAAGGCCTCATCGGACAAAACAATGGTGGTGCCGGACGAAGACGGCGTGGACA
JMFN039D08+           TAAGTCCGAAGGCCTCATCGGACAAAACAATGGTGGTGCCGGACGAAGACGGCGTGGACA
JMFF020P14+           TAAGTCCGAAGGCCTCATCGGACAAAACAATGGTGGTGCCGGACGAAGACGGCGTGGACA
JMFF035M01+           TAAGTCCGAAGGCCTCATCGGACAAAACAATGGTGGTGCCGGACGAAGACGGCGTGGACA
                      ____________________________________________________________
consensus             TAAGTCCGAAGGCCTCATCGGACAAAACAATGGTGGTGCCGGACGAAGACGGCGTGGACA
 
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rJMFF035M01-          CCACA-CCCGGCGCGTAGTCAACGATCTTGATCTGTATAGTTTGGTTCTTGACGCAAGCT
rJMFF020P14-          CCACA-CCCGGCGCGTAATCAACGATCTTGATCTGTATAGTTTGGTTCTTGACGCAAGCT
JMFN039D08+           CCACA-CCCGGCGCGTAGTCAACGATCTTGATCTGTATAGTTTGGTTCTTGACGCAAGCT
JMFF020P14+           CCACACCCCGGCGCGTAGTCAACGATCTTGATCTGTATAGTTTGGTTCTTGACGCAAGCT
JMFF035M01+           CCACA-CCCGGCGCGTAGTCAACGATCTTGATCTGTATAGTTTGGTTCTTGACGCAAGCT
                      ____________________________________________________________
consensus             CCACA-CCCGGCGCGTAGTCAACGATCTTGATCTGTATAGTTTGGTTCTTGACGCAAGCT
 
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rJMFF035M01-          CCGGGCGTTATGGAACTTATACACCCCACCAAGTATTGCCTTCCACACGAAGCTCCATTG
rJMFF020P14-          CCGGGCGTTATGGAACTTATACACCCCACCAAGTATTGCCTTCCACACGAAGCTCCATTG
JMFN039D08+           CCGGGCGTTATGGAACTTATACACCCCACCAAGTATTGCCTTCCACACGAAGCTCCATTG
JMFF020P14+           CCGGGCGTTATGGAACTTATACACCCCACCAAGTATTGCCTTCCACACGAAGCTCCATTG
JMFF035M01+           CCGGGCGTTATGGAACTTATACACCCCACCAAGTATTGCCTTCCACACGAAGCTCCATTG
                      ____________________________________________________________
consensus             CCGGGCGTTATGGAACTTATACACCCCACCAAGTATTGCCTTCCACACGAAGCTCCATTG
 
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rJMFF035M01-          TCCCATATCCCATCTCCCGCCGCCGCGAACA                             
rJMFF020P14-          TCCCATATCCCATCTCCCGCCGCCGCGAACAAATTGCTCGACGGAAACTGTGTCGGATCG
JMFN039D08+           TCCCATATCCCATCTCCCGCCGCCGCGAACAAATTGCTCGACGGAAACTGTGTCGGATCG
JMFF020P14+           TCCCATATCCCATCTCCCGCCGCCGCGAACAAATTGCTCGACGGAAACTGTGTCGGATCG
JMFF035M01+           TCCCATATCCCATCTCCCGCCGCCGCGAACAAATTGCTCGACGGAAACTGTGTCGGATCG
                      ____________________________________________________________
consensus             TCCCATATCCCATCTCCCGCCGCCGCGAACAAATTGCTCGACGGAAACTGTGTCGGATCG
 
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rJMFF020P14-          CTCCCGAAACACGTCGNTGGCGAGNANGGAGGGCTATAGTGAGCTGCAGTTCCCNCATCT
JMFN039D08+           CTCCCGAAACACGTCGTTGGCGAGTAGGGAGGGCTATAGTGAGCTGCAGTTCCCACATCT
JMFF020P14+           CTCCCGAAACACGTCGTTGGCGAGTAGGGAGGGCTATAGTGAGCTGCAGTTCCCACATCT
JMFF035M01+           CTCCCGAAACACGTCGTTGGCGAGTAGGGAGGGCTATAGTGAGCTGCAGTTCCCACATCT
                      ____________________________________________________________
consensus             CTCCCGAAACACGTCGTTGGCGAGTAGGGAGGGCTATAGTGAGCTGCAGTTCCCACATCT
 
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rJMFF020P14-          GCCTGACAAGCACGAAAATAAAA                                     
JMFN039D08+           GCCTGACAAGCACGAAAATAAAAAGAGTGGAAGAATAAAATTATAAAGAAACAGAGGGTT
JMFF020P14+           GCCTGACAAGCACGAAAATAAAAAGAGTGGAAGAATAAAATTATAAAGAAACAGAGGGTT
JMFF035M01+           GCCTGACAAGCACGAAAATAAAAAGAGTGGAAGAATAAAATTATAAAGAAACAGAGGGTT
                      ____________________________________________________________
consensus             GCCTGACAAGCACGAAAATAAAAAGAGTGGAAGAATAAAATTATAAAGAAACAGAGGGTT
 
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JMFN039D08+           CT                                                          
JMFF020P14+           CTGCTACCTGTATACATTTTCTTTTCAGTAAGCTAAGGCAGCGAAATTTAATGTTCTGAA
JMFF035M01+           CTGCTACCTGTATACATTTTCTTTTCAGTAAGCTAAGGCAGCGAAATTTAATGTTCTGAA
                      ____________________________________________________________
consensus             CTGCTACCTGTATACATTTTCTTTTCAGTAAGCTAAGGCAGCGAAATTTAATGTTCTGAA