| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003J15 | Sequence | 601 | 001727 (10) | ref|XP_006361420.1| | 4e-94 | PREDICTED: uncharacterized protein R102.4 isoform X1 [Solanum tuberosum] ref|XP | 410 | 011715 (12) | ref|XP_009798339.1| | 1e-19 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri |
| JMFF006A17 | Sequence | 510 | 001727 (10) | ref|XP_009631531.1| | 5e-56 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi | 836 | 011715 (12) | ref|XP_004236787.1| | 3e-81 | PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X2 [Solanum |
| JMFF009H15 | Sequence | 436 | 001727 (10) | ref|XP_009631531.1| | 4e-37 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi | 797 | 011715 (12) | ref|XP_009798339.1| | 5e-98 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri |
| JMFF020D04 | Sequence | 435 | 001727 (10) | ref|XP_009631531.1| | 1e-36 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi | 762 | 011715 (12) | ref|XP_009798339.1| | 1e-96 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri |
| JMFF023B04 | Sequence | 496 | 001727 (10) | ref|XP_009631531.1| | 1e-52 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi | 736 | 011715 (12) | ref|XP_009798339.1| | 3e-92 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri |
| JMFF023J06 | Sequence | 463 | 001727 (10) | ref|XP_009631531.1| | 1e-42 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi | 788 | 011715 (12) | ref|XP_009798339.1| | 1e-106 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri |
| JMFF027L13 | Sequence | 615 | 001727 (10) | ref|XP_009631531.1| | 3e-98 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi | 464 | 011715 (12) | ref|XP_009798339.1| | 2e-30 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri |
| JMFF034N12 | Sequence | 513 | 001727 (10) | ref|XP_009631531.1| | 5e-56 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi | 796 | 011715 (12) | ref|XP_009798339.1| | 2e-107 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri |
| JMFF042J15 | Sequence | 640 | 001727 (10) | ref|XP_006361420.1| | 5e-88 | PREDICTED: uncharacterized protein R102.4 isoform X1 [Solanum tuberosum] ref|XP | 644 | 011715 (12) | ref|XP_009798339.1| | 3e-62 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri |
| JMFF050M22 | Sequence | 586 | 001727 (10) | ref|XP_009631531.1| | 3e-72 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi | 603 | 011715 (12) | ref|XP_009798339.1| | 3e-59 | PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
JMFF027L13+ CTGAGAGGCATCTACCACCAGAG
JMFF003J15+ CCACCAGAG
____________________________________________________________
consensus CTGAGAGGCATCTACCACCAGAG
. : . : . : . : . : . :
JMFF027L13+ TGTGCATTTGAATTTTCCAAGCAGATGAGTCTAGTGGTTGGGAAACATATCTCAAATCTA
JMFF003J15+ TGTGCATTTGAATTTTCCAAGCAGATGAGTCTAGTGGTTGGGAAACATATCTCAAATCTA
JMFF042J15+ CAAGCAGATGAGTCTAGTGGTTGGGAAACATATCTCAAATCTA
____________________________________________________________
consensus TGTGCATTTGAATTTTCCAAGCAGATGAGTCTAGTGGTTGGGAAACATATCTCAAATCTA
. : . : . : . : . : . :
JMFF027L13+ GGATCTCGGATTGCAGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
JMFF003J15+ GGATCTCGGATTGCAGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
JMFF042J15+ GGATCTCGGATTGCAGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
JMFF050M22+ AGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
____________________________________________________________
consensus GGATCTCGGATTGCAGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
. : . : . : . : . : . :
JMFF027L13+ ATTGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTTTCATAAATGTGGATA
JMFF003J15+ ATTGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTTTCATAAATGTGGATA
JMFF042J15+ ATTGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTTTCATAAATGTGGATA
JMFF006A17+ TGGAAATACCTCCGTTTTCATAAATGTGGATA
JMFF023B04+ TTCATAAATGTGGATA
JMFF050M22+ ATNGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTNTCATAAATGTGGATA
JMFF034N12+ GTGGAAATACCTCCGTTTTCATAAATGTGGATA
____________________________________________________________
consensus ATTGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTTTCATAAATGTGGATA
. : . : . : . : . : . :
JMFF027L13+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF003J15+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF042J15+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF006A17+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF023B04+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF023J06+ GATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF020D04+ TGAGTAAGAACGCTA
JMFF009H15+ CAATGAGTAAGAACGCTA
JMFF050M22+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF034N12+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
____________________________________________________________
consensus TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
. : . : . : . : . : . :
JMFF027L13+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF003J15+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF042J15+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF006A17+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF023B04+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF023J06+ ATCAGGTTACCCATCGTGCNTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF020D04+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF009H15+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF050M22+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF034N12+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
____________________________________________________________
consensus ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
. : . : . : . : . : . :
JMFF027L13+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF003J15+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF042J15+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF006A17+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF023B04+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF023J06+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF020D04+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF009H15+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF050M22+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF034N12+ GCGATTTCTGCTTCAAGTCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
____________________________________________________________
consensus GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
. : . : . : . : . : . :
JMFF027L13+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF003J15+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF042J15+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF006A17+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF023B04+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF023J06+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF020D04+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF009H15+ TCAGCACTTGCCATTGCAGCCCGAATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF050M22+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF034N12+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
____________________________________________________________
consensus TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
. : . : . : . : . : . :
JMFF027L13+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF003J15+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF042J15+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF006A17+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF023B04+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF023J06+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF020D04+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF009H15+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF050M22+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF034N12+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
____________________________________________________________
consensus AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
. : . : . : . : . : . :
JMFF027L13+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF003J15+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF042J15+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF006A17+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF023B04+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF023J06+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF020D04+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF009H15+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF050M22+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF034N12+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
____________________________________________________________
consensus TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
. : . : . : . : . : . :
JMFF027L13+ CAATTCACTCAGC
JMFF003J15+ CAATTCACTCAGC
JMFF042J15+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF006A17+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF023B04+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF023J06+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF020D04+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF009H15+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF050M22+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF034N12+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
____________________________________________________________
consensus CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
. : . : . : . : . : . :
JMFF042J15+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTT
JMFF006A17+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTG
JMFF023B04+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT
JMFF023J06+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTT
JMFF020D04+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT
JMFF009H15+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTT
JMFF050M22+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT
JMFF034N12+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT
____________________________________________________________
consensus TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT