Contig 001724:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034D03Sequence481001724 (7)ref|XP_006350855.1|2e-22PREDICTED: uncharacterized protein At3g28850-like [Solanum tuberosum]691001724 (7)emb|CDP09231.1|3e-28unnamed protein product [Coffea canephora]
JMFF048G05Sequence453001724 (7)ref|XP_006350855.1|1e-18PREDICTED: uncharacterized protein At3g28850-like [Solanum tuberosum]452001724 (7)ref|XP_004242507.1|2e-08PREDICTED: uncharacterized protein At5g39865 [Solanum lycopersicum]
JMFS036A02Sequence601001724 (7)ref|XP_006350855.1|2e-71PREDICTED: uncharacterized protein At3g28850-like [Solanum tuberosum]
JMSF008E04Sequence360001724 (7)ref|XP_004242507.1|2e-11PREDICTED: uncharacterized protein At5g39865 [Solanum lycopersicum]751004192 (2)ref|XP_006350855.1|2e-70PREDICTED: uncharacterized protein At3g28850-like [Solanum tuberosum]
JMSF010N17Sequence258001724 (7)695004192 (2)ref|XP_006350855.1|4e-60PREDICTED: uncharacterized protein At3g28850-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF048G05-                          GGCAAACATAGTGGGAATGAATTTATTATGGTTTTTGTTGACAA
rJMFF034D03-                                              ATTTATTATGGTTTTTGTTGACAA
                      ____________________________________________________________
consensus                             GGCAAACATAGTGGGAATGAATTTATTATGGTTTTTGTTGACAA
 
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rJMFF048G05-          ATGCAACATAATCACGTGTCTCGTGTTTTCACTTGATTCATGACCACCCAAATCAAGAAT
rJMFF034D03-          ATGCAACATAATCACGTGTCTCGTGTTTTCACTTGATTCATGACCACCCAAATCAAGAAT
                      ____________________________________________________________
consensus             ATGCAACATAATCACGTGTCTCGTGTTTTCACTTGATTCATGACCACCCAAATCAAGAAT
 
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rJMFF048G05-          ACAGACTGTTATGGTCCTACAATTCTAAAAACTCCATTCACCCATTTACAGAACAAACTA
rJMFF034D03-          ACAGACTGTTATGGTCCTACAATTCTAAAAACTCCATTCACCCATTTACAGAACAAACTA
                      ____________________________________________________________
consensus             ACAGACTGTTATGGTCCTACAATTCTAAAAACTCCATTCACCCATTTACAGAACAAACTA
 
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rJMFF048G05-          AGTTACACTTTCAAATTGAGAAACCCAAAAAAAATAAAAGGACCAGACTACAAAATGACA
rJMFF034D03-          AGTTACACTTTCAAATTGAGAAACCCAAAAAAAATAAAAGGACCAGACTACAAAATGACA
                      ____________________________________________________________
consensus             AGTTACACTTTCAAATTGAGAAACCCAAAAAAAATAAAAGGACCAGACTACAAAATGACA
 
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rJMFF048G05-          TAAAATGAGGGGGCGGGGAGTGCAAATATTTTTTTTGTTTCACCTCCTCATGATTGATGA
rJMFF034D03-          TAAAATGAGGGGGCGGGGAGTGCAAATATTTTTTTTGTTTCACCTCCTCATGATTGATGA
                      ____________________________________________________________
consensus             TAAAATGAGGGGGCGGGGAGTGCAAATATTTTTTTTGTTTCACCTCCTCATGATTGATGA
 
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rJMFF048G05-          CGTCATCCTAGCTAGAGCCAAAATCTAATCGCACGGTTCAAAGGGGCGCACGGGAACAAG
rJMFF034D03-          CGTCATCCTAGCTAGAGCCAAAATCTAATCGCACGGTTCAGAGGGGCGCACGGGAACAAG
                      ____________________________________________________________
consensus             CGTCATCCTAGCTAGAGCCAAAATCTAATCGCACGGTTCAGAGGGGCGCACGGGAACAAG
 
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rJMFF048G05-          AAGGGCAGTTGATGAGACCGCTTTGACTGCACGCCGTACAAGTCCTGAAGCCGCACTTTT
rJMFF034D03-          AAGGGCAGTTGATGAGACCGCTTTGACTGCACGCCGTACAAGTCCTGAAGCCGCACTTTT
                      ____________________________________________________________
consensus             AAGGGCAGTTGATGAGACCGCTTTGACTGCACGCCGTACAAGTCCTGAAGCCGCACTTTT
 
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rJMFF048G05-          CGCCGTCGCTTACGTCACACTCGTCGCAGAGGATATACCGGTGGCCGT            
rJMFF034D03-          CGCCGTCGCTTACGTCACACTCGTCGCAGAGGATATACCGGTGGCCGTCGCAGAGCTCGC
                      ____________________________________________________________
consensus             CGCCGTCGCTTACGTCACACTCGTCGCAGAGGATATACCGGTGGCCGTCGCAGAGCTCGC
 
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rJMFF034D03-          ACGTGTCGGGGTTGGCCGGCGGCAGCCCTTCCACGCACTTCTTCAGCTCGCCGACAAATC
JMFS036A02+                                                            GCCGACAAATC
                      ____________________________________________________________
consensus             ACGTGTCGGGGTTGGCCGGCGGCAGCCCTTCCACGCACTTCTTCAGCTCGCCGACAAATC
 
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rJMFF034D03-          CCGCTCGTCGATCGACACGCGGAAGCTCCGCAGGACCGACAGAACATCCCGGCAATCCTC
JMFS036A02+           CCGCTCGTCGATCGACACGCGGAAGCTCCGCAGGACCGACAGAACATCCCGGCAATCCTC
JMFF034D03+                                                                      C
                      ____________________________________________________________
consensus             CCGCTCGTCGATCGACACGCGGAAGCTCCGCAGGACCGACAGAACATCCCGGCAATCCTC
 
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rJMFF034D03-          GAACGTCCGGCGGACCACGCCGAGGCTCGTGAAGTACACCACTATCCGTTTCTCGGCTCC
JMFS036A02+           GAACGTCCGGCGGACCACGCGGAGGCTCGTGAAGTACACCACTATCCGTTTCTCGGCTCC
JMFF048G05+                                      CGTGAAGTACACCACTATCCGTTTCTCGGCTCC
JMFF034D03+           GAACGTCCGGCGGACCACGCCGAGGCTCGTGAAGTACACCACTATCCGTTTCTCGGCTCC
                      ____________________________________________________________
consensus             GAACGTCCGGCGGACCACGCCGAGGCTCGTGAAGTACACCACTATCCGTTTCTCGGCTCC
 
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rJMFF034D03-          CGGGAGCGAGATCGGCGCGTGCGATTGACACGTCGCATTCGATTTGTTCTCCGGCGGCGG
JMFS036A02+           CGGGAGCGAGATCGGCGCGTGCGATTGACACGTCGCATTCGATTTGTTCTCCGGCGGCGG
JMFF048G05+           CGGGAGCGAGATCGGCGCGTGCGATTGACACGTCGCATTCGATTTGTTCTCCGGCGGCGG
JMSF008E04+                                                            TCCGGCGGCGG
JMFF034D03+           CGGGAGCGAGATCGGCGCGTGCGATTGACACGTCGCATTCGATTTGTTCTCCGGCGGCGG
                      ____________________________________________________________
consensus             CGGGAGCGAGATCGGCGCGTGCGATTGACACGTCGCATTCGATTTGTTCTCCGGCGGCGG
 
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rJMFF034D03-          CGATAGA                                                     
JMFS036A02+           CGATAGAGCGCGTAGAAAGGCGTTGGCGAGGCGGACGCGGTGGAAGATGTAGTGCTTCGC
JMFF048G05+           CGATAGAGCGCGTAGAAAGGCGTTGGCGAGGCGGACGCGGTGGAAGATGTAGTGCTTCGC
JMSF008E04+           CGATAGAGCGCGTAGAAAGGCGTTGGCGAGGCGGACGCGGTGGAAGATGTAGTGCTTCGC
JMFF034D03+           CGATAGAGCGCGTAGAAAGGCGTTGGCGAGGCGGACGCGGTGGAAGATGTAGTGCTTCGC
                      ____________________________________________________________
consensus             CGATAGAGCGCGTAGAAAGGCGTTGGCGAGGCGGACGCGGTGGAAGATGTAGTGCTTCGC
 
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JMFS036A02+           GAATTGGGTCGGGTGCCGGCAGCCGGAGTCGTCGGCGATTAGGGTTTGGATGTCTTTGAA
JMFF048G05+           GAATTGGGTCGGGTGCCGGCAGCCGGAGTCGTCGGCGATTAGGGTTTGGATGTCTTTGAA
JMSF008E04+           GAATTGGGTCGGGTGCCGGCAGCCGGAGTCGTCGGCGATTAGGGTTTGGATGTCTTTGAA
JMSF010N17+                                          TCGGCGATTAGGGTTTGGATGTCTTTGAA
JMFF034D03+           GAATTGGGTCGGGTGCCGGCAGCCGGAGTCGTCGGCGATTAGGGTTTGGATGTCTTTGAA
                      ____________________________________________________________
consensus             GAATTGGGTCGGGTGCCGGCAGCCGGAGTCGTCGGCGATTAGGGTTTGGATGTCTTTGAA
 
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JMFS036A02+           AGAGGAGCAGGAGAAAGTAGTAGTGTTGCTAGGAACCCGAATCTTTGAGTTGGTTCGAGT
JMFF048G05+           AGAGGAGCAGGAGAAAGTAGTAGTGTTGCTAGGAACCCGAATCTTTGAGTTGGTTCGAGT
JMSF008E04+           AGAGGAGCAGGAGAAAGTAGTAGTGTTGCTAGGAACCCGAATCTTTGAGTTGGTTCGAGT
JMSF010N17+           AGAGGAGCAGGAGAAAGTAGTAGTGTTGCTAGGAACCCGAATCTTTGAGTTGGTTCGAGT
JMFF034D03+           AGAGGAGCAGGAGAAAGTAGTAGTGTTGCTAGGAACCCGAATCTTTGAGTTGGTTCGAGT
                      ____________________________________________________________
consensus             AGAGGAGCAGGAGAAAGTAGTAGTGTTGCTAGGAACCCGAATCTTTGAGTTGGTTCGAGT
 
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JMFS036A02+           TAGCCACATGGATTCGAAGAAACAAGGTTCGACTTTTCGAA                   
JMFF048G05+           TAGCCACATGGATTCGAAGAAACAAGGTTCGACTTTTCGAATGAAATTCGAGGGATTTAA
JMSF008E04+           TAGCCACATGGATTCGAAGAAACAAGGTTCGACTTTTCGAATGAAATTCGAGGGATTTAA
JMSF010N17+           TAGCCACATGGATTCGAAGAAACAAGGTTCGACTTTTCGAATGAAATTCGAGGGATTTAA
JMFF034D03+           TAGCCACATGGATTCGAAGAAACAAGGTTCGACTTTTCGAATGAAATTCGAGGGATTTAA
                      ____________________________________________________________
consensus             TAGCCACATGGATTCGAAGAAACAAGGTTCGACTTTTCGAATGAAATTCGAGGGATTTAA
 
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JMFF048G05+           GGTCGGAGAAATCTATATATTGTGTTGGATTTATGCCGGAAATGAAGAAGAAGATGAAGA
JMSF008E04+           GGTCGGAGAAATCTATATATTGTGTTGGATTTATGCCGGAAATGAAGAAGAAGATGAAGA
JMSF010N17+           GGTCGGAGAAATCTATATATTGTGTTGGATTTATGCCGGAAATGAAGAAGAAGATGAAGA
JMFF034D03+           GGTCGGAGAAATCTATATATTGTGTTGGATTTATGCCGGAAATGAAGAAGAAGATGAAGA
                      ____________________________________________________________
consensus             GGTCGGAGAAATCTATATATTGTGTTGGATTTATGCCGGAAATGAAGAAGAAGATGAAGA
 
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JMFF048G05+           ACAGGAGAGGGGAAAATGGTGACAGGCAGGAGTGGGTTGGTAACTGTTAAGTTGGCTTTT
JMSF008E04+           ACAGGAGAGGGGAAAATGGTGACAGGCAGGAGTGGGTTGGTAACTG              
JMSF010N17+           ACAGGAGAGGGGAAAATGGTGACAGGCAGGAGTGGGTTGGTAACTG              
JMFF034D03+           ACAGGAGAGGGGAAAATGGTGACAGGCAGGAGTGGGTTGGTAACTGTTAAGTTGGCTTTT
                      ____________________________________________________________
consensus             ACAGGAGAGGGGAAAATGGTGACAGGCAGGAGTGGGTTGGTAACTGTTAAGTTGGCTTTT