Contig 001718:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS007E08+                                               AGTGCGCCTCCTGGAGGCTAACGT
                      ____________________________________________________________
consensus                                                 AGTGCGCCTCCTGGAGGCTAACGT
 
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JMFS007E08+           ACGCGCTCTTCATCGCCAACACCGCGTCGAACACTTCCCCCATTATCATCTCCATCTCGA
JMFF032P08+                                               CCCCNATTATCATCTCCATCTCGA
                      ____________________________________________________________
consensus             ACGCGCTCTTCATCGCCAACACCGCGTCGAACACTTCCCCCATTATCATCTCCATCTCGA
 
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JMFS007E08+           TCACCCTCTCAGTCCTCGGCTCCCCGCTCTCGCCGTCCCATACGCTCATCAGCTCTTCAT
JMFF032P08+           TCACCCTCTCAGTCCTCGGCTCCCCGCTCTCGCCGTCCCATACGCTCATCAGCTCTTCAT
                      ____________________________________________________________
consensus             TCACCCTCTCAGTCCTCGGCTCCCCGCTCTCGCCGTCCCATACGCTCATCAGCTCTTCAT
 
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JMFS007E08+           CGTGATCTTGCTCGTCTCCCATATCCATCTCCTTCTCCTCCTCCGACTCATCGCCGCCGC
JMFF032P08+           CGTGATCTTGCTCGTCTCCCATATCCATCTCCTTCTCCTCCTCCGACTCATCGCCGCCGC
                      ____________________________________________________________
consensus             CGTGATCTTGCTCGTCTCCCATATCCATCTCCTTCTCCTCCTCCGACTCATCGCCGCCGC
 
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JMFS007E08+           GGCTGACGGAGATGTCGTCGATCTGGAACGGCTGGAGCAAGCAGGATCCCGTGAATCTCT
JMFF032P08+           GGCTGACGGAGATGTCGTCGATCTGGAACGGCTGGAGCAAGCAGGATCCCGTGAATCTCT
                      ____________________________________________________________
consensus             GGCTGACGGAGATGTCGTCGATCTGGAACGGCTGGAGCAAGCAGGATCCCGTGAATCTCT
 
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JMFS007E08+           GTATCAGATGAGAGAAATTCGAGACCTTGTTCGCCATTTTCTTTATGCCTCTGTAGTGAG
JMFF032P08+           GTATCAGATGAGAGAAATTCGAGACCTTGTTCGCCATTTTCTTTATGCCTCTGTAGTGAG
                      ____________________________________________________________
consensus             GTATCAGATGAGAGAAATTCGAGACCTTGTTCGCCATTTTCTTTATGCCTCTGTAGTGAG
 
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JMFS007E08+           GGTTGTGGGATCTCATGGAGATATTATTGGTTTGCTTGTGAAGTGCAGGATGATCTGTAT
JMFF032P08+           GGTTGTGGGATCTCATGGAGATATTATTGGTTTGCTTGTGAAGTGCAGGATGATCTGTAT
                      ____________________________________________________________
consensus             GGTTGTGGGATCTCATGGAGATATTATTGGTTTGCTTGTGAAGTGCAGGATGATCTGTAT
 
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JMFS007E08+           AGCAAGGGATGGAGTATGGCTTCTGCACTTCTATGTCCTCCTGCAGGCTCCTTGGATTAT
JMFF032P08+           AGCAAGGGATGGAGTATGGCTTCTGCACTTCTATGTCCTCCTGCAGGCTCCTTGGATTAT
                      ____________________________________________________________
consensus             AGCAAGGGATGGAGTATGGCTTCTGCACTTCTATGTCCTCCTGCAGGCTCCTTGGATTAT
 
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JMFS007E08+           TTGTTCTCTTCCTCATTTCTTGACCTCTCAGCTGCTCGAAGCAAAATGTTTGGCAATTGG
JMFF032P08+           TTGTTCTCTTCCTCATTTCTTGACCTCTCAGCTGCTCGAAGCAAAATGTTTGGCAATTGG
                      ____________________________________________________________
consensus             TTGTTCTCTTCCTCATTTCTTGACCTCTCAGCTGCTCGAAGCAAAATGTTTGGCAATTGG
 
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JMFS007E08+           TTTTGATCGAAGATGTGATTGCTCTTTACAATGTTTGTACGAGTGTCTGAAGAAAGCTAG
JMFF032P08+           TTTTGATCGAAGATGTGATTGCTCTTTACAATGTTTGTACGAGTGTCTGAAGAAAGCTAG
                      ____________________________________________________________
consensus             TTTTGATCGAAGATGTGATTGCTCTTTACAATGTTTGTACGAGTGTCTGAAGAAAGCTAG
 
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JMFS007E08+           AGAGAGAGAAAGAGAGAGAGAGAGGGATGCAA                            
JMFF032P08+           AGAGAGAGAAAGAGAGAGAGAGAGGGATGCAAATTGGAATTAGGCAAGATATATGCACAT
                      ____________________________________________________________
consensus             AGAGAGAGAAAGAGAGAGAGAGAGGGATGCAAATTGGAATTAGGCAAGATATATGCACAT