Contig 001717:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF009N24+                                                            AAAATTTTTTT
                      ____________________________________________________________
consensus                                                              AAAATTTTTTT
 
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JMFF009N24+           TNAAAAAAAAAAAAACTTATATTGAGAATGCTTTTAGAAAGACAGAATACTGGACTTGAC
                      ____________________________________________________________
consensus             TNAAAAAAAAAAAAACTTATATTGAGAATGCTTTTAGAAAGACAGAATACTGGACTTGAC
 
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JMFF009N24+           ATTTTAACCTCCGCTCAACAGGTGCCGAAATTGACCCTTCAGGCAAACATAGTAGGAATT
                      ____________________________________________________________
consensus             ATTTTAACCTCCGCTCAACAGGTGCCGAAATTGACCCTTCAGGCAAACATAGTAGGAATT
 
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JMFF009N24+           AATTACAGTATAATCTCATGCACCAGTAACTTGCCTGTTGCCTAAGAGGCGATGGAGGCG
JMFF032K01+                                            CCTGTTGCCTAAGAGCTTATGGAGGCG
                      ____________________________________________________________
consensus             AATTACAGTATAATCTCATGCACCAGTAACTTGCCTGTTGCCTAAGAGGTTATGGAGGCG
 
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JMFF009N24+           CATAATGAGATCAACTTCATCCACACTGAAGTCGCCTCGCTTTATATCAGGACGAAGATA
JMFF032K01+           TAGAATGAGATCAGCTTCTTCCAAACTGAAATGGCCTCTCTTTATATCAGGATGGAGATA
                      ____________________________________________________________
consensus             TATAATGAGATCAGCTTCTTCCACACTGAAGTGGCCTCTCTTTATATCAGGATGGAGATA
 
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JMFF009N24+           GTTCAACCATCTCAATCTACAACTTTTTCTGCACCTGTTTAACCCAGCTCTAAGGGGAAC
JMFF032K01+           GTTCAACCATCTCAATCTGCAACTTTTTCTGCACCTATTCAACCCAGCTCTAAAGGGAAC
                      ____________________________________________________________
consensus             GTTCAACCATCTCAATCTGCAACTTTTTCTGCACCTGTTTAACCCAGCTCTAAGGGGAAC
 
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JMFF009N24+           TAGATGCCATTTCCCTTCCCCATACTTCTGAATGCACTTCCTCAAAAGATTATCTTCTTC
JMFF032K01+           TAGGTGCCATTTTCCTTCACCAAATTTCTGAATGCATTTCCTCAAAAGGTCATCTTCTTC
                      ____________________________________________________________
consensus             TAGGTGCCATTTTCCTTCCCCATATTTCTGAATGCATTTCCTCAAAAGGTTATCTTCTTC
 
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JMFF009N24+           TTCGGTCCATGCACCTTTTCTCA                                     
JMFF032K01+           CTCCGACCAAGCACCCTTTCTCACTCGCGGAGACCACCTTGCAGAAGAATTAACCATGGC
                      ____________________________________________________________
consensus             TTCGGTCCATGCACCTTTTCTCACTCGCGGAGACCACCTTGCAGAAGAATTAACCATGGC
 
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JMFF032K01+           AGGCTGACGTAAATTCTTACGTAGTGGGTACTTACGTTGTTTTGCGTGCAGTGGGTAGCT
                      ____________________________________________________________
consensus             AGGCTGACGTAAATTCTTACGTAGTGGGTACTTACGTTGTTTTGCGTGCAGTGGGTAGCT
 
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JMFF032K01+           AGCTAGAGCCAAAATGCAGAAAAAATGAAAACAGAAACTTCGACAAGTGCAATAGAAAAC
                      ____________________________________________________________
consensus             AGCTAGAGCCAAAATGCAGAAAAAATGAAAACAGAAACTTCGACAAGTGCAATAGAAAAC