Contig 001715:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031A05Sequence545001715 (4)ref|XP_009626180.1|2e-08PREDICTED: uncharacterized protein At1g04910-like [Nicotiana tomentosiformis]728014872ref|XP_010327510.1|9e-62PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi
JMFF032B14Sequence519001715 (4)ref|XP_009626180.1|3e-08PREDICTED: uncharacterized protein At1g04910-like [Nicotiana tomentosiformis]691005791 (2)ref|XP_010327510.1|9e-78PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi
JMFF041B24Sequence651001715 (4)ref|XP_009626180.1|1e-25PREDICTED: uncharacterized protein At1g04910-like [Nicotiana tomentosiformis]
JMSF042F17Sequence734001715 (4)ref|XP_009626180.1|9e-51PREDICTED: uncharacterized protein At1g04910-like [Nicotiana tomentosiformis]742005791 (2)ref|XP_010327510.1|1e-71PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersi

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042F17+ GAACAACCAGAGTAGCACCAAGAATCCTTGCAATCACCACAGCATCCACAATCTGATTCC
                      ____________________________________________________________
consensus GAACAACCAGAGTAGCACCAAGAATCCTTGCAATCACCACAGCATCCACAATCTGATTCC
 
. : . : . : . : . : . :
JMSF042F17+ TCTGTTGATTCATTCCACCAGAAACCACCACCATCAGATACTTGCTCCTCTCTTTCACAA
                      ____________________________________________________________
consensus TCTGTTGATTCATTCCACCAGAAACCACCACCATCAGATACTTGCTCCTCTCTTTCACAA
 
. : . : . : . : . : . :
JMSF042F17+ TATTCCCACTATCTTTCCTATACTGCTCACTGAAATCCAAACACGCCCTATACCCCAGCC
JMFF041B24+ TATCTTTCCTATACTGCTCACTGAAATCCAAACACGCCCTATACCCCAGCC
                      ____________________________________________________________
consensus TATTCCCACTATCTTTCCTATACTGCTCACTGAAATCCAAACACGCCCTATACCCCAGCC
 
. : . : . : . : . : . :
JMSF042F17+ CATCTGGCTGCTTCCAAAACTCGCTCTTCTCGTTCACCTCTTCCCCATCCCCACCACTCC
JMFF041B24+ CATCTGGCTGCTTCCAAAACTCGCTCTTCTCGTTCACCTCTTCCCCATCCCCACCACTCC
JMFF031A05+ CACTCC
                      ____________________________________________________________
consensus CATCTGGCTGCTTCCAAAACTCGCTCTTCTCGTTCACCTCTTCCCCATCCCCACCACTCC
 
. : . : . : . : . : . :
JMSF042F17+ CCAGCGCAGAACCCATATACCCATTGGAAAAATCGGCCTTTTCTTGGAGACCCAAACACG
JMFF041B24+ CCAGCGCAGAACCCATATACCCATTGGAAAAATCGGCCTTTTCTTGGAGACCCAAACACG
JMFF031A05+ CCAGCGCAGAACCCATATACCCATTGGAAAAATCGGCCTTTTCTTGGAGACCCAAACACG
JMFF032B14+ CCATTGGAAAAATCGGCCTTTTCTTGGAGACCCAAACACG
                      ____________________________________________________________
consensus CCAGCGCAGAACCCATATACCCATTGGAAAAATCGGCCTTTTCTTGGAGACCCAAACACG
 
. : . : . : . : . : . :
JMSF042F17+ GGTATGGGGAGAAAGGCAACAAGGTGTCGAAATTGAACCACAGCTTTAGAGTTCCAAAGA
JMFF041B24+ GGTATGGGGAGAAAGGCAACAAGGTGTCGAAATTGAACCACAGCTTTAGAGTTCCAAAGA
JMFF031A05+ GGTATGGGGAGAAAGGCAACAAGGTGTCGAAATTGAACCACAGCTTTAGAGTTCCAAAGA
JMFF032B14+ GGTATGGGGAGAAAGGCAACAAGGTGTCGAAATTGAACCACAGCTTTAGAGTTCCAAAGA
                      ____________________________________________________________
consensus GGTATGGGGAGAAAGGCAACAAGGTGTCGAAATTGAACCACAGCTTTAGAGTTCCAAAGA
 
. : . : . : . : . : . :
JMSF042F17+ GACCAAATAGGAGCAGAAACAAAACCCAAAACCTGGGATTTCTCAGCAAAAATCTCAGCT
JMFF041B24+ GACCAAATAGGAGCAGAAACAAAACCCAAAACCTGGGATTTCTCAGCAAAAATCTCAGCT
JMFF031A05+ GACCAAATAGGAGCAGAAACAAAACCCAAAACCTGGGATTTCTCAGCAAAAATCTCAGCT
JMFF032B14+ GACCAAATAGGAGCAGAAACAAAACCCAAAACCTGGGATTTCTCAGCAAAAATCTCAGCT
                      ____________________________________________________________
consensus GACCAAATAGGAGCAGAAACAAAACCCAAAACCTGGGATTTCTCAGCAAAAATCTCAGCT
 
. : . : . : . : . : . :
JMSF042F17+ TTGTAGCAAATGAGGAGGAGGGGCTCTGCCTCTTCTTGGGGGAGAGAAGCACCAGGGCTT
JMFF041B24+ TTGTAGCAAATGAGGAGGAGGGGCTCTGCCTCTTCTTGGGGGAGAGAAGCACCAGGGCTT
JMFF031A05+ TTGTAGCAAATGAGGAGGAGGGGCTCTGCCTCTTCTTGGGGGAGAGAAGCACCAGGGCTT
JMFF032B14+ TTGTAGCAAATGAGGAGGAGGGGCTCTGCCTCTTCTTGGGGGAGAGAAGCACCAGGGCTT
                      ____________________________________________________________
consensus TTGTAGCAAATGAGGAGGAGGGGCTCTGCCTCTTCTTGGGGGAGAGAAGCACCAGGGCTT
 
. : . : . : . : . : . :
JMSF042F17+ GGAGTGGAGCGTTGACCATATCCGACGCCACTGAAATGTAGGATTGTTGCTTCTTCTTTG
JMFF041B24+ GGAGTGGAGCGTTGACCATATCCGACGCCACTGAAATGTAGGATTGTTGCTTCTTCTTTG
JMFF031A05+ GGAGTGGAGCGTTGACCATATCCGACGCCACTGAAATGTAGGATTGTTGCTTCTTCTTTG
JMFF032B14+ GGAGTGGAGCGTTGACCATATCCGACGCCACTGAAATGTAGGATTGTTGCTTCTTCTTTG
                      ____________________________________________________________
consensus GGAGTGGAGCGTTGACCATATCCGACGCCACTGAAATGTAGGATTGTTGCTTCTTCTTTG
 
. : . : . : . : . : . :
JMSF042F17+ ACACGGCCATCTTTATGAAGAAGATGAACAAAACAGGGATTCTTGATTTTAAAGACTGGA
JMFF041B24+ ACACGGCCATCTTTATGAAGAAGATGAACAAAACAGGGATTCTTGATTTTAAAGACTGGA
JMFF031A05+ ACACGGCCATCTTTATGAAGAAGATGAACAAAACAGGGATTCTTGATTTTAAAGACTGGA
JMFF032B14+ ACACGGCCATCTTTATGAAGAAGATGAACAAAACAGGGATTCTTGATTTTAAAGACTGGA
                      ____________________________________________________________
consensus ACACGGCCATCTTTATGAAGAAGATGAACAAAACAGGGATTCTTGATTTTAAAGACTGGA
 
. : . : . : . : . : . :
JMSF042F17+ GCTTTCTGCTGTAAATCGAGATTTTTCTTGCTTTTGAGGCTTGTGGGATTGCTTGAAGTG
JMFF041B24+ GCTTTCTGCTGTAAATCGAGATTTTTCTTGCTTTTGAGGCTTGTGGGATTGCTTGAAGTG
JMFF031A05+ GCTTTCTGCTGTAAATCGAGATTTTTCTTGCTTTTGAGGCTTGTGGGATTGCTTGAAGTG
JMFF032B14+ GCTTTCTGCTGTAAATCGAGATTTTTCTTGCTTTTGAGGCTTGTGGGATTGCTTGAAGTG
                      ____________________________________________________________
consensus GCTTTCTGCTGTAAATCGAGATTTTTCTTGCTTTTGAGGCTTGTGGGATTGCTTGAAGTG
 
. : . : . : . : . : . :
JMSF042F17+ GGAGAAAATGGTGGAGAGATAGAAGGGAGGAGACGCGAAATACGATGATGAATCCGCGTT
JMFF041B24+ GGAGAAAATGGTGGAGAGATAGAAGGGAGGAGACGCGAAATACGATGATGAATCCGCGTT
JMFF031A05+ GGAGAAAATGGTGGAGAGATAGAAGGGAGGAGACGCGAAATACGATGATGAATCCGCGTT
JMFF032B14+ GGAGAAAATGGTGGAGAGATAGAAGGGAGGAGACGCGAAATACGATGATGAATCCGCGTT
                      ____________________________________________________________
consensus GGAGAAAATGGTGGAGAGATAGAAGGGAGGAGACGCGAAATACGATGATGAATCCGCGTT
 
. : . : . : . : . : . :
JMSF042F17+ GGGTGTTGGAGT
JMFF041B24+ GGGTGTTGGAGTCAGAAATTGTGTGTGTGAAGAGGCCAATGAATGTTCTTCTTCTTCTTT
JMFF031A05+ GGGTGTTGGAGTCAGAAATTGTGTGTGTGAAGAGG-CAATGAATGTTCTTCTTCTTCTTT
JMFF032B14+ GGGTGTTGGAGTCAGAAATTGTGTGTGTGAAGAGG-CAATGAATGTTCTTCTTCTTCTTT
                      ____________________________________________________________
consensus GGGTGTTGGAGTCAGAAATTGTGTGTGTGAAGAGG-CAATGAATGTTCTTCTTCTTCTTT