| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031P13 | Sequence | 538 | 001714 (6) | ref|XP_004245662.1| | 8e-93 | PREDICTED: probable rhamnose biosynthetic enzyme 1 [Solanum lycopersicum] | 684 | 001714 (6) | ref|XP_011072055.1| | 1e-106 | PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamn |
| JMFF050F12 | Sequence | 586 | 001714 (6) | ref|XP_004245662.1| | 2e-104 | PREDICTED: probable rhamnose biosynthetic enzyme 1 [Solanum lycopersicum] | 399 | 001714 (6) | ref|XP_004143938.1| | 3e-25 | PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Cucumis sativus] ref|X |
| JMFS150C03 | Sequence | 462 | 001714 (6) | ref|XP_004245662.1| | 2e-71 | PREDICTED: probable rhamnose biosynthetic enzyme 1 [Solanum lycopersicum] | |||||
| JMSF036L06 | Sequence | 631 | 001714 (6) | emb|CDP09826.1| | 9e-122 | unnamed protein product [Coffea canephora] | 595 | 018280 | |||
This contig is upended
. : . : . : . : . : . :
rJMFF050F12- CAAAACATTGGTGAAAAATTCTTTACAGGGCTAATCCCAAATTATTCTTATTGAAA
rJMFF031P13- TTACAGTGCTAATCCCAAATTATTCATATTGAAA
____________________________________________________________
consensus CAAAACATTGGTGAAAAATTCTTTACAGTGCTAATCCCAAATTATTCTTATTGAAA
. : . : . : . : . : . :
rJMFF050F12- TATGAGAGAAGATACAACTTTCAATACCCAACAAGCCTACTTTTGGATAAACAAAACCTG
rJMFF031P13- TATGAGAGAAGATACAACATTCAATACACAACAAGCCTACATTTGGATAAACAGAACCTG
____________________________________________________________
consensus TATGAGAGAAGATACAACTTTCAATACCCAACAAGCCTACTTTTGGATAAACAGAACCTG
. : . : . : . : . : . :
rJMFF050F12- GGAAATGTAAACTTCCCCCCGATCAACATTGTACCAAAATCAAAAAAAAATATAAATTCT
rJMFF031P13- TGAAATGTAGACTTCACACCGATCAACATTGTACCAAAATCANAAAAAAATATAAATTCT
____________________________________________________________
consensus TGAAATGTAGACTTCCCCCCGATCAACATTGTACCAAAATCAAAAAAAAATATAAATTCT
. : . : . : . : . : . :
rJMFF050F12- TGAAAAAAAATTCAAACCACTTATAAGGGTCAAGCAACGGGGGTCTTACAATTTGGCTTG
rJMFF031P13- TGAAATAAAATTCAAACCACTTATAAGGTTCAAGCAACGGGGGTCTTACGATTTGGCTTG
____________________________________________________________
consensus TGAAATAAAATTCAAACCACTTATAAGGTTCAAGCAACGGGGGTCTTACGATTTGGCTTG
. : . : . : . : . : . :
rJMFF050F12- AACACGTATTGTATGAGGGACTCCTTGATCGACATGAGTTCCGGGAATTCCTTCTTTAAC
rJMFF031P13- AACACGTATTGTATGAGGGACTCCTTGATCGACATGAGTTCCGGGAATTCCTTCTTTAGC
____________________________________________________________
consensus AACACGTATTGTATGAGGGACTCCTTGATCGACATGAGTTCCGGGAATTCCTTCTTTAGC
. : . : . : . : . : . :
rJMFF050F12- TTGGTAGCGCCAAGCTCATTGTTGCTTCTTGGAACAACTAAAACCTTTGCCTGCTCCTCG
rJMFF031P13- TTGGTAGCGTCAAGCTCATTGTTGCTTCTTGGAGCAACTATAACCTTTGCCTGCTCCTCN
____________________________________________________________
consensus TTGGTAGCGTCAAGCTCATTGTTGCTTCTTGGAGCAACTATAACCTTTGCCTGCTCCTCG
. : . : . : . : . : . :
rJMFF050F12- AGGGAAAAGTTCTTCCACGTAAAACATGGATCAATGAATTCCC
rJMFF031P13- AGGGTAAAGTTCTTCCACGTAAAACATGGATCAATGTATTCCCTGTACATCTCCAGAATC
____________________________________________________________
consensus AGGGTAAAGTTCTTCCACGTAAAACATGGATCAATGTATTCCCTGTACATCTCCAGAATC
. : . : . : . : . : . :
rJMFF031P13- TCGTTATGGCTGACCACTCCAGGGTTCGTGAAGTTCCATATCCCGGTGAGGTTTCTCTTT
____________________________________________________________
consensus TCGTTATGGCTGACCACTCCAGGGTTCGTGAAGTTCCATATCCCGGTGAGGTTTCTCTTT
. : . : . : . : . : . :
rJMFF031P13- GCCATCTCGATGGATATAGGGAGGAGCTCGTCTAATATTGTCATCGAGTTTGGAATGTTA
____________________________________________________________
consensus GCCATCTCGATGGATATAGGGAGGAGCTCGTCTAATATTGTCATCGAGTTTGGAATGTTA
. : . : . : . : . : . :
rJMFF031P13- ACCACCTTCTCGTAGCGAGCGATCTTGGTGATGAAGTTACGAGGGTTGGATAGATCAGAT
JMSF036L06+ CTCGTAGCGAGCGATCTTGGTGATGAAGTTACGAGGGTTGGATAGATCAGAT
____________________________________________________________
consensus ACCACCTTCTCGTAGCGAGCGATCTTGGTGATGAAGTTACGAGGGTTGGATAGATCAGAT
. : . : . : . : . : . :
rJMFF031P13- GAGATAGGCATCCTCACTCGTAATGTGCAGACATTCTCATAGTTCTTGAGCAAATCCTCC
JMSF036L06+ GAGATAGGCATCCTCACTCGTAATGTGCAGACATTCTCATAGTTCTTGAGCAAATCCTCC
JMFF050F12+ GGCATCCTCACTCGTAATGTGCAGACATTCTCATAGGTCTTGAGCAAATCCTCC
____________________________________________________________
consensus GAGATAGGCATCCTCACTCGTAATGTGCAGACATTCTCATAGTTCTTGAGCAAATCCTCC
. : . : . : . : . : . :
rJMFF031P13- ACCATGGCTTTGGTCTTGGAATAGAA
JMSF036L06+ ACCATGGCTTTGGTCTTGGAATAGAAGGACCCAATGAAATTAGGAGTGTCCTCCTCCTTG
JMFF050F12+ ACCATGGCTTTGGTCTTGGAATAGAAGGACCCAATGAAATTAGGAGTGTCCTCCTCCTAG
JMFF031P13+ CATGGCTTTGGTCTTGGAATAGAAGGACCCAATGAAATTAGGAGTGTCCCCCTCCTTG
____________________________________________________________
consensus ACCATGGCTTTGGTCTTGGAATAGAAGGACCCAATGAAATTAGGAGTGTCCTCCTCCTTG
. : . : . : . : . : . :
JMSF036L06+ AAGCCGACGCCGGATCCGAGAACGTGGCCGGAATCGTACTCGAAAATGCAGCCGGTGGCG
JMFF050F12+ AAGCCGACGCCGGATCCGAGAACGTGGCCGGAATCGTACTCGAAAATGCAGCCGGTGGCG
JMFS150C03+ GGAATCGTACTGAGAAATGCAGCCGGTGGAG
JMFF031P13+ AAGCCGACGCCGGATCCGAGAACGTGGCCGGAATCGTACTCGAAAATGCAGCCGGTGGCG
____________________________________________________________
consensus AAGCCGACGCCGGATCCGAGAACGTGGCCGGAATCGTACTCGAAAATGCAGCCGGTGGCG
. : . : . : . : . : . :
JMSF036L06+ AAGTTAATGAGCACCAGCCCCTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
JMFF050F12+ AAGTTAATGAGCACCAGCCCCTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
JMFS150C03+ GAGTTAATGAGCACCAGCCCTTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
JMFF031P13+ AAGTTAATGAGCACCAGCCCCTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
____________________________________________________________
consensus AAGTTAATGAGCACCAGCCCCTTCTCCCTGCAGACGTCGGCGAGCGTGAGCGTGCCCACA
. : . : . : . : . : . :
JMSF036L06+ ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
JMFF050F12+ ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
JMFS150C03+ ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
JMFF031P13+ ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
____________________________________________________________
consensus ACGTTGGCCCGGATGGTCTCCACCTTGTGGGACTCGCACCAGTCGACGTTCGGGCGGCCG
. : . : . : . : . : . :
JMSF036L06+ GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
JMFF050F12+ GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
JMFS150C03+ GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
JMFF031P13+ GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
____________________________________________________________
consensus GTGACTCCGGCGGCGTTGAATACGTGGGTCGGGTTGACGGATGCGATGTCGGACTCCAAA
. : . : . : . : . : . :
JMSF036L06+ GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
JMFF050F12+ GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
JMFS150C03+ GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
JMFF031P13+ GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
____________________________________________________________
consensus GATACCCGGTTCTCCAACCGCCCAGACCCGTAAGCGTAGTGGATCCCCTGAGCCTCGCAC
. : . : . : . : . : . :
JMSF036L06+ AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGAACTTATACTGC
JMFF050F12+ AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGGACTTATACTGC
JMFS150C03+ AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGAACTTATACTGC
JMFF031P13+ AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGAACTTATACTGC
____________________________________________________________
consensus AGTTTGCCCAGCACACCGCCAATCCACCCGGTGCGGCCATAGATCAAGAACTTATACTGC
. : . : . : . : . : . :
JMSF036L06+ TTGGTTTCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
JMFF050F12+ TTGGTTCCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
JMFS150C03+ TTGGTTTCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
JMFF031P13+ TTGGTTTCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
____________________________________________________________
consensus TTGGTTTCTGAGCCACTAACCGGGAAACCCATTGCGCCAAAAGCTGCTCAAATCAAATGG
. : . : . : . : . : . :
JMSF036L06+ AAAACGTATGTTCAATATAGACTATACTGCATACACCT
JMFF050F12+ AAAACGTATGTTCAATATAGACTATACTGCATACACCTAGCTAGCTCT
JMFS150C03+ AAAACGTATGTTCAA
JMFF031P13+ AAAACGTATGTTCAATATAGACTATACTGCATACACCTAGCTAGCTCTTCGTGCGTATAT
____________________________________________________________
consensus AAAACGTATGTTCAATATAGACTATACTGCATACACCTAGCTAGCTCTTCGTGCGTATAT