Contig 001710:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030P20Sequence422001710 (4)ref|XP_006465041.1|2e-17PREDICTED: putative disease resistance protein RGA3-like isoform X1 [Citrus sin803011737 (3)ref|XP_007011208.1|6e-13NB-ARC domain-containing disease resistance protein, putative [Theobroma cacao]
JMFS015G02Sequence547001710 (4)ref|XP_009614610.1|2e-47PREDICTED: putative disease resistance protein RGA3 [Nicotiana tomentosiformis]
JMFS150E11Sequence625001710 (4)ref|XP_009796828.1|2e-32PREDICTED: putative disease resistance protein RGA3 [Nicotiana sylvestris]
JMFS156A08Sequence641001710 (4)ref|XP_009796828.1|6e-32PREDICTED: putative disease resistance protein RGA3 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS015G02+ TGGCTTTTGCA
                      ____________________________________________________________
consensus TGGCTTTTGCA
 
. : . : . : . : . : . :
JMFS015G02+ ATCTTGATCTGGTCAAAGGGGTCGGAAACACAAATCCACACCCTTTCATCAAAATGAGTC
                      ____________________________________________________________
consensus ATCTTGATCTGGTCAAAGGGGTCGGAAACACAAATCCACACCCTTTCATCAAAATGAGTC
 
. : . : . : . : . : . :
JMFS015G02+ TTGATCTTTTCATCCCCAAAGACTAGTTGAGCAAGGGTAGTTTTCCCTATCCCTCCCGTG
                      ____________________________________________________________
consensus TTGATCTTTTCATCCCCAAAGACTAGTTGAGCAAGGGTAGTTTTCCCTATCCCTCCCGTG
 
. : . : . : . : . : . :
JMFS015G02+ CCCACTATGGAAATCACATGGGGCCCATTTCCATTTCTTGCTTCTTCTTCTCCAGAATTC
                      ____________________________________________________________
consensus CCCACTATGGAAATCACATGGGGCCCATTTCCATTTCTTGCTTCTTCTTCTCCAGAATTC
 
. : . : . : . : . : . :
JMFS015G02+ TTCAGTAACTTGCTTATTAAAGCACTGGCATCGGATTTCCGACCTTGAATCTCTGACACA
                      ____________________________________________________________
consensus TTCAGTAACTTGCTTATTAAAGCACTGGCATCGGATTTCCGACCTTGAATCTCTGACACA
 
. : . : . : . : . : . :
JMFS015G02+ TCCACATCAAACGCAGTGGTGACTCGCATCAATTCTTGATCAGAGTGTGATGCTGCAGAA
                      ____________________________________________________________
consensus TCCACATCAAACGCAGTGGTGACTCGCATCAATTCTTGATCAGAGTGTGATGCTGCAGAA
 
. : . : . : . : . : . :
JMFS015G02+ GTGTGTGTTATAGATGCATAATCAAATTTGAACTGATCTTTCTCTTTTGTAATCCGATCA
JMFS150E11+ CAAATTTGAACTCATCTTTCTCTTTGGTGATCCGATCA
JMFS156A08+ CAAATTTGAACTCATCTTTCTCTTTGGTGATCCGATCA
                      ____________________________________________________________
consensus GTGTGTGTTATAGATGCATAATCAAATTTGAACTCATCTTTCTCTTTGGTGATCCGATCA
 
. : . : . : . : . : . :
JMFS015G02+ AGTGTTGAATCAAGCTCCTTTATTTTCTTGGCGATGTCTCGATGCATAGCAAACCTTTTG
JMFS150E11+ AGTCTGGAATCGAGATCCTTTATTTTGTTGGCGATGTCTCGATGCATAACAATCCTTTTG
JMFS156A08+ AGTCTGGAATCGAGATCCTTTATTTTGTTGGCGATGTCTCGATGCATAACAATCCTTTTG
                      ____________________________________________________________
consensus AGTCTGGAATCGAGATCCTTTATTTTGTTGGCGATGTCTCGATGCATAACAATCCTTTTG
 
. : . : . : . : . : . :
JMFS015G02+ TAATGGAAACGCGAAGGCAGGAAAGA
JMFS150E11+ AAAGGGAAACAACAAGGCAGGAAAGAGCTACAGCTTCCTGCAGTTGGAGCTGCTGCAACC
JMFS156A08+ AAAGGGAAACAACAAGGCAGGAAAGAGCTACAGCTTCCTGCAGTTGGAGCTGCTGCAACC
                      ____________________________________________________________
consensus AAAGGGAAACAACAAGGCAGGAAAGAGCTACAGCTTCCTGCAGTTGGAGCTGCTGCAACC
 
. : . : . : . : . : . :
JMFS150E11+ TGGGACGACCTCTCCATCTGTTGTCTGCGACTTCTGGTGCTCCACTCATCAAGAACATCT
JMFS156A08+ TGGGACGACCTCTCCATCTGTTGTCTGCGACTTCTGGTGCTCCACTCATCAAGAACATCT
JMFF030P20+ GTGCTCCACTCATCAAGAACATCT
                      ____________________________________________________________
consensus TGGGACGACCTCTCCATCTGTTGTCTGCGACTTCTGGTGCTCCACTCATCAAGAACATCT
 
. : . : . : . : . : . :
JMFS150E11+ TCCACATCATAGCAGAAGGCTTTCATCTCTTCCACCCACAGCTTGACGCTCTCTTCCATG
JMFS156A08+ TCCACATCATAGCAGAAGGCTTTCATCTCTTCCACCCACAGCTTGACGCTCTCTTCCATG
JMFF030P20+ TCCACATCATAGCAGAAGGCTTTCATCTCTTCCACCCACAGCTTGACGCTCTCTTCCATG
                      ____________________________________________________________
consensus TCCACATCATAGCAGAAGGCTTTCATCTCTTCCACCCACAGCTTGACGCTCTCTTCCATG
 
. : . : . : . : . : . :
JMFS150E11+ AAGCTTCTCCTCTCTGCATCGACCAACACCGCCCTGATTTTGTTGAGCTTTGATGAGAGG
JMFS156A08+ AAGCTTCTCCTCTCTGCATCGACCAACACCGCCCTGATTTTGTTGAGCTTTGATGAGAGG
JMFF030P20+ AAGCTTCTCCTCTCTGCATCGACCAACACCGCCCTGATTTTGTTGAGCTTTGATGAGAGG
                      ____________________________________________________________
consensus AAGCTTCTCCTCTCTGCATCGACCAACACCGCCCTGATTTTGTTGAGCTTTGATGAGAGG
 
. : . : . : . : . : . :
JMFS150E11+ TTTTTGATCTCCTTCTCCACACCCAACGTTGCTCTTAGCTCCTGGATTTGGTCCTTGACG
JMFS156A08+ TTTTTGATCTCCTTCTCCACACCCAACGTTGCTCTTAGCTCCTGGATTTGGTCCTTGACG
JMFF030P20+ TTTTTGATCTCCTTCTCCACACCCAACGTTGCTCTTAGCTCCTGGATTTGGTCCTTGACG
                      ____________________________________________________________
consensus TTTTTGATCTCCTTCTCCACACCCAACGTTGCTCTTAGCTCCTGGATTTGGTCCTTGACG
 
. : . : . : . : . : . :
JMFS150E11+ ATGATGGACAGCAGATCCACAACACCGGAGATGATAGCGTCGGCCATG
JMFS156A08+ ATGATGGACAGCAGATCCACAACACCGGAGATGATAGCGTCGGCCATG
JMFF030P20+ ATGATGGACAGCAGATCCACAACACCGGAGATGATAGCGTCGGCCATGGTTAGTTCACTC
                      ____________________________________________________________
consensus ATGATGGACAGCAGATCCACAACACCGGAGATGATAGCGTCGGCCATGGTTAGTTCACTC
 
. : . : . : . : . : . :
JMFF030P20+ TGTACTCGATCTGTAGCAGTGGAGACTGAATGACTTTTAGATTGGTTTGGGTTTGGTTGT
                      ____________________________________________________________
consensus TGTACTCGATCTGTAGCAGTGGAGACTGAATGACTTTTAGATTGGTTTGGGTTTGGTTGT