Contig 001704:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004N19Sequence430001704 (6)ref|XP_007224723.1|2e-26hypothetical protein PRUPE_ppa024959mg [Prunus persica] gb|EMJ25922.1| hypotheti636001704 (6)ref|XP_009784786.1|325PREDICTED: uncharacterized protein LOC104233152 [Nicotiana sylvestris]
JMFF029J11Sequence507001704 (6)ref|XP_007224723.1|4e-34hypothetical protein PRUPE_ppa024959mg [Prunus persica] gb|EMJ25922.1| hypotheti713001704 (6)ref|XP_009784786.1|322PREDICTED: uncharacterized protein LOC104233152 [Nicotiana sylvestris]
JMFF042M16Sequence659001704 (6)ref|XP_007224723.1|2e-62hypothetical protein PRUPE_ppa024959mg [Prunus persica] gb|EMJ25922.1| hypotheti590001704 (6)ref|XP_009784786.1|242PREDICTED: uncharacterized protein LOC104233152 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF042M16-                                                                  GGCA
                      ____________________________________________________________
consensus                                                                     GGCA
 
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rJMFF042M16-          AAAAAAATGTGTAGTCATTATTTACAGGTGTACATTAATAGATGTTCACAAGGAGATAAA
rJMFF029J11-                        TCATTATTTACAGGTGTACATTAATAGATGTTCACAAGGAGATAAA
                      ____________________________________________________________
consensus             AAAAAAATGTGTAGTCATTATTTACAGGTGTACATTAATAGATGTTCACAAGGAGATAAA
 
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rJMFF042M16-          TCAGTTTACCTGACAAAAAATTCAAACAGTTGAAATTTGGTTATATTTTTCATACTTGTA
rJMFF029J11-          TCAGTTTACCTGACAAAAAATTCAAACAGTTGAAATTTGGTTATATTTTTCATACTTGTA
rJMFF004N19-                                             TTTGGTTATATTTTTCATACTTGTA
                      ____________________________________________________________
consensus             TCAGTTTACCTGACAAAAAATTCAAACAGTTGAAATTTGGTTATATTTTTCATACTTGTA
 
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rJMFF042M16-          ATGGTGTTTATAGCTTGAAAACTGATTATATGTACACTCAAGCAGGAGTAAGGTGATAAT
rJMFF029J11-          ATGGTGTTTATAGCTTGAAAACTGATTATATGTACACTCAAGCAGGAGTAAGGTGATAAT
rJMFF004N19-          ATGGTGTTTATAGCTTGAAAACTGATTATATGTACACTCAAGCAGGAGTAAGGTGATAAT
                      ____________________________________________________________
consensus             ATGGTGTTTATAGCTTGAAAACTGATTATATGTACACTCAAGCAGGAGTAAGGTGATAAT
 
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rJMFF042M16-          CATCACCCATGTGGTAGAACGCATTCCTGAGCTTATTATACTTTTCTACATCAAAATTAT
rJMFF029J11-          CATCACCCATGTGGTAGAACGCATTCCTGAGCTTATTATACTTTTCCACATCAAAATTAT
rJMFF004N19-          CATCACCCATGTGGTAGAACGCATTCCTGAGCTTATTATACTTTTCTACATCAAAATTAT
                      ____________________________________________________________
consensus             CATCACCCATGTGGTAGAACGCATTCCTGAGCTTATTATACTTTTCTACATCAAAATTAT
 
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rJMFF042M16-          GAATCTTCATTAATTTTTGTTGCTTGGTTTTGAATCGCCTCTGGAAATACCCTTCAAAAC
rJMFF029J11-          GAATCTTCATTAATTTTTGTTGCTTGGTTTTGAATCGCCTCTGGAAATACCCTTCAAAAC
rJMFF004N19-          GAATCTTCATTAATTTTTGTTGCTTGGTTTTGAATCGCCTCTGGAAATACCCTTCAAAAC
                      ____________________________________________________________
consensus             GAATCTTCATTAATTTTTGTTGCTTGGTTTTGAATCGCCTCTGGAAATACCCTTCAAAAC
 
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rJMFF042M16-          TGGGCTCTTTGGATGTCCTTAGGAAGAAGGAATAGGCGAGCCCAAAGTGAAGGGTGGTCA
rJMFF029J11-          TGGGCTCTTTGGATGTCCTTAGGAAGAAGGAATAGGCGAGCCCAAAGTGAAGGGTGGTCA
rJMFF004N19-          TGGGCTCTTTGGATGTCCTTAGGAAGAAGGAATAGGCGAGCCCAAAGTGAAGGGTGGTCA
                      ____________________________________________________________
consensus             TGGGCTCTTTGGATGTCCTTAGGAAGAAGGAATAGGCGAGCCCAAAGTGAAGGGTGGTCA
 
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rJMFF042M16-          CGAAGAAGCAAATGGGCTCCATCACATCCCAACTTAGCTCCCAGAAAGTCAGCCTCATAA
rJMFF029J11-          CGAAGAAGCAAATGGGCTCCATCACATCCCAACTTAGCTCCCAGAAAGTCAGCCTCATAA
rJMFF004N19-          CGAAGAAGCAAATGGGCTCCATCACATCCCAACTTAGCTCCCAGAAAGTCAGCCTCATAA
                      ____________________________________________________________
consensus             CGAAGAAGCAAATGGGCTCCATCACATCCCAACTTAGCTCCCAGAAAGTCAGCCTCATAA
 
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rJMFF042M16-          AGCCCAATGTTTGCAAAGCAAGAAAGCCCAGCCCACAATATAGCTCCCCTCTTACTAATG
rJMFF029J11-          AGCCCAATGTTTGCAAAGCAAGAAAGCCCAGCCCACAATATAGCTCCCCTCTTACTAATG
rJMFF004N19-          AGCCCAATGTTTGCAAAGCAAGAAAGCCCAGCCCACAATATAGCTCCCCTCTTACTAATG
                      ____________________________________________________________
consensus             AGCCCAATGTTTGCAAAGCAAGAAAGCCCAGCCCACAATATAGCTCCCCTCTTACTAATG
 
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rJMFF042M16-          ATTGGGCCTTTTGGTCTATCATGGCCTTTTGCTTCTCCATCACTTCAAGCTCGTTCCTTC
rJMFF029J11-          ATTGGGCCTTTTGGTCTATCATGGCCTTTTGCTTCTCCATCACTTCAAGCTCGTTCCTTC
rJMFF004N19-          ATTGGGCCTTTTGGTCTATCATGGCCTTTTGCTTCTCCATCACTTCAAGCTCGTTCCTTC
                      ____________________________________________________________
consensus             ATTGGGCCTTTTGGTCTATCATGGCCTTTTGCTTCTCCATCACTTCAAGCTCGTTCCTTC
 
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rJMFF042M16-          TCGGGTCGTTTGGCATCGCGATTGATTCAGAAATCATTTTTTCCAT              
rJMFF029J11-          TCGGGTCGTTTGGCATCGCGATTGATTCAGAAATCATTTTTTCCATAGATTTTGCTACCT
rJMFF004N19-          TCGGGTCGTTTGGCATCGCGATTGATTCAGAAATCATTTTTTCCATAGATTTTGCTACCT
                      ____________________________________________________________
consensus             TCGGGTCGTTTGGCATCGCGATTGATTCAGAAATCATTTTTTCCATAGATTTTGCTACCT
 
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rJMFF029J11-          GATCGGGGCGGAGCAAAACGACGTCGCCGAGAACAATAACGCTGCCGGATTGATCCAACG
rJMFF004N19-          GATCGGGGCGGAGCAAAACGACGTCGCCGAGAACAATAACGCTGCCGGATTGATCCAACG
JMFF042M16+           GATCGGGGCGGAGCAAAACGACGTCGCCGAGAACAATAACGCTGCCGGATTGATCCAACG
                      ____________________________________________________________
consensus             GATCGGGGCGGAGCAAAACGACGTCGCCGAGAACAATAACGCTGCCGGATTGATCCAACG
 
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rJMFF029J11-          TCTTTGCGAACTCCAGACCTTGCTCTCTATTGTTACAAACTTCGCCGCAAATCTGAACGA
rJMFF004N19-          TCTTTGCGAACTCCAGACCTTGCTCTCTATTGTTACAAACTTCGCCGCAAATCTGAACGA
JMFF042M16+           TCTTTGCGAACTCCAGACCTTGCTCTCTATTGTTACAAACTTCGCCGCAAATCTGAACGA
                      ____________________________________________________________
consensus             TCTTTGCGAACTCCAGACCTTGCTCTCTATTGTTACAAACTTCGCCGCAAATCTGAACGA
 
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rJMFF029J11-          ACTCCGA                                                     
rJMFF004N19-          ACTCCGA                                                     
JMFF042M16+           ACTCCGAATACGAGACGGAGTTAACCGGAATTTCTCTGATCCTCAATATCAACTTCTGCA
JMFF029J11+                                            CTCTGATCCTCAATATCAACTTCTGCA
                      ____________________________________________________________
consensus             ACTCCGAATACGAGACGGAGTTAACCGGAATTTCTCTGATCCTCAATATCAACTTCTGCA
 
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JMFF004N19+                                                          CCGATCACGTCTT
JMFF042M16+           GTTGATAAGACCTTAGAATCTTCCTCGCATCGTTAACTGAAATTCCTCCGATCACGTCTT
JMFF029J11+           GTTGATAAGACCTTAGAATCTTCCTCGCATCGTTAACTGAAATTCCTCCGATCACGTCTT
                      ____________________________________________________________
consensus             GTTGATAAGACCTTAGAATCTTCCTCGCATCGTTAACTGAAATTCCTCCGATCACGTCTT
 
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JMFF004N19+           CCGGAACCGGCGGAGGGGGAACGAGTCCGTCGAGGCGGAGTCTATCGCCGGAAATGTTAA
JMFF042M16+           CCGGAACCGGCGGAGGGGGAACGAGTCCGTCGAGGCGGAGTCTATCGCCGGAAATGTTAA
JMFF029J11+           CCGGAACCGGCGGAGGGGGAACGAGTCCGTCGAGGCGGAGTCTATCGCCGGAAATGTTAA
                      ____________________________________________________________
consensus             CCGGAACCGGCGGAGGGGGAACGAGTCCGTCGAGGCGGAGTCTATCGCCGGAAATGTTAA
 
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JMFF004N19+           TCAGCCATAACTTTTCTCTCAGCTTATCTCCGACTGGAACCGAGGAAAAATCCGGCGGTT
JMFF042M16+           TCAGCCATAACTTTTCTCTCAGCTTATCTCCGACTGGAACCGAGGAAAAATCCGGCGGTT
JMFF029J11+           TCAGCCATAACTTTTCTCTCAGCTTATCTCCGACTGNAACCGAGGAAAAATCCGGCGGTT
                      ____________________________________________________________
consensus             TCAGCCATAACTTTTCTCTCAGCTTATCTCCGACTGGAACCGAGGAAAAATCCGGCGGTT
 
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JMFF004N19+           TTGAGGCTTGGTTGATCGCTCTCCTGTGGAGGAACCGCCGGGAAAATCCACCGACCGTTC
JMFF042M16+           TTGAGGCTTGGTTGATCGCTCTCCTGTGGAGGAACCGCCGGGAAAATCCACCGACCGTTC
JMFF029J11+           TTGAGGCTTGGTTGATCGCTCTCCTGTGGAGGAACCGCCGGGAAAATCCACCGACCGTTC
                      ____________________________________________________________
consensus             TTGAGGCTTGGTTGATCGCTCTCCTGTGGAGGAACCGCCGGGAAAATCCACCGACCGTTC
 
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JMFF004N19+           CGCCCGGCGACGTGAGAAGCTCTCTGTGGAAGTTCAGTCTGGCAGCACTCTCCGGAGCTA
JMFF042M16+           CGCCCGGCGACGTGAGAAGCTCTCTGTGGAAGTTCAGTCTGGCAGCACTCTCCGGAGCTA
JMFF029J11+           CGCCCGGCGACGTGAGAAGCTCTCTGTGGAAGTTCAGTCTGGCAGCACTCTCCGGAGCTA
                      ____________________________________________________________
consensus             CGCCCGGCGACGTGAGAAGCTCTCTGTGGAAGTTCAGTCTGGCAGCACTCTCCGGAGCTA
 
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JMFF004N19+           GGCGGTTTCCGGCCGCAGCCGGAGAGTGTTGGAGTGATGAGATGACTGCATCAGCGGAGT
JMFF042M16+           GGCGGTTTCCGGCCGCAGCCGGAGAGTGTTGGAGTGATGAGATGACTGCATCAGCGGAGT
JMFF029J11+           GGCGGTTTCCGGCCGCAGCCGGAGAGTGTTGGAGTGATGAGATGACTGCATCAGCGGAGT
                      ____________________________________________________________
consensus             GGCGGTTTCCGGCCGCAGCCGGAGAGTGTTGGAGTGATGAGATGACTGCATCAGCGGAGT
 
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JMFF004N19+           CGGCGTTTTTACAGTTGAATAGGCGCTTCGTTAGGGTTCTACGAAGCGCCATTACCGTGC
JMFF042M16+           CGGCGTTTTTACAGTTGAATAGGCGCTTCGTTAGGGTTCTACGAAGCGCCATTACCGTGC
JMFF029J11+           CGGCGTTTTTACAGTTGAATAGGCGCTTCGTTAGGGTTCTACGAAGCGCCATTACCGTGC
                      ____________________________________________________________
consensus             CGGCGTTTTTACAGTTGAATAGGCGCTTCGTTAGGGTTCTACGAAGCGCCATTACCGTGC
 
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JMFF004N19+           GAAGGAGAGAGAAAGTGAACGTTATAGAGAGAGAAAGCGGTTGTAAGAATTTCCGA    
JMFF042M16+           GAAGGAGAGAGAAAGTGAACGTTATAGAGAGAGAAAGCGGTTGTAAGAATTTCCGA    
JMFF029J11+           GAAGGAGAGAGAAAGTGAACGTTATAGAGAGAGAAAGCGGTTGTAAGAATTTCCGATAGT
                      ____________________________________________________________
consensus             GAAGGAGAGAGAAAGTGAACGTTATAGAGAGAGAAAGCGGTTGTAAGAATTTCCGATAGT