Contig 001701:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF047D07-                                                                    AC
                      ____________________________________________________________
consensus                                                                       AC
 
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rJMFF047D07-          CCTGGAGAGTTTTTTTTTTTTTTTTGACCAAAAAAAGCATATGTTAAGTGACAAAAAATA
rJMFF028E24-                                                               AAAAATA
                      ____________________________________________________________
consensus             CCTGGAGAGTTTTTTTTTTTTTTTTGACCAAAAAAAGCATATGTTAAGTGACAAAAAATA
 
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rJMFF047D07-          CAACTATATATGGATATCTACTAGCTAGGAAAGCATGTCGGAAATCAAACGAATTTGGGA
rJMFF028E24-          CAACTATATATGGATATCTACTAGCTAGGAAAGCATGTCGGAAATCAAACGAATTTGGGA
                      ____________________________________________________________
consensus             CAACTATATATGGATATCTACTAGCTAGGAAAGCATGTCGGAAATCAAACGAATTTGGGA
 
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rJMFF047D07-          TGGTAGTCATGGTACAAAATCCAATTTTCCATAATTCAGCTAGTAAATAGCAATATACGG
rJMFF028E24-          TGGTAGTCATGGTACAAAATCCAATTTTCCATAATTCAGCTAGTAAATAGCAATATACGG
                      ____________________________________________________________
consensus             TGGTAGTCATGGTACAAAATCCAATTTTCCATAATTCAGCTAGTAAATAGCAATATACGG
 
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rJMFF047D07-          AGTAGCATATATAGGAAAATGAAGCGTGGGTGGAACCTAGACTTTGGGGAGTCTGACCTT
rJMFF028E24-          AGTAGCATATATAGGAAAATGAAGCGTGGGTGGAACCTAGACTTTGGGGAGTCTGACCTT
                      ____________________________________________________________
consensus             AGTAGCATATATAGGAAAATGAAGCGTGGGTGGAACCTAGACTTTGGGGAGTCTGACCTT
 
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rJMFF047D07-          ACTCTATCGCATTCTTCACAACAAGGATTACAACCACCTTCATCAGTTTTTAAATTAAAT
rJMFF028E24-          ACTCTATCGCATTCTTCACAACAAGGATTACAACCACCTTCATCAGTTTTTAAATTAAAT
JMFF047D07+                             CAACAAGGATTACAACCACCTTCATCAGTTTTTAAATTAAAT
                      ____________________________________________________________
consensus             ACTCTATCGCATTCTTCACAACAAGGATTACAACCACCTTCATCAGTTTTTAAATTAAAT
 
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rJMFF047D07-          GTCCTATGACCATAATCAAGAAAACATACCTAAACACTGATTACAGTTACGAAGGTTGGA
rJMFF028E24-          GTCCTATGACCATAATCAAGAAAACATACCTAAACACTGATTACAGTTACGAAGGTTGGA
JMFF047D07+           GTCCTATGACCATAATCAAGAAAACATACCTAAACACTGATTACAGTTACGAAGGTTGGA
                      ____________________________________________________________
consensus             GTCCTATGACCATAATCAAGAAAACATACCTAAACACTGATTACAGTTACGAAGGTTGGA
 
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rJMFF047D07-          ACCAGCCATTGGACCAATTTTCAGACAAACCTTCGGCTGAAACCCGAGGTAATCCAAACT
rJMFF028E24-          ACCAGCCATTGGACCAATTTTCAGACAAACCTTCGGCTGAAACCCGAGGTAATCCAAACT
JMFF047D07+           ACCAGCCATTGGACCAATTTTCAGACAAACCTTCGGCTGAAACCCGAGGTAATCCAAACT
JMFF028E24+                                                    ACCCGAGGTAATCCAAACT
                      ____________________________________________________________
consensus             ACCAGCCATTGGACCAATTTTCAGACAAACCTTCGGCTGAAACCCGAGGTAATCCAAACT
 
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rJMFF047D07-          TCAGTACGACAACTTCTAGAATACCATCTTGTCTGAATGTTAGAGAACATAGCCTGGGAT
rJMFF028E24-          TCAGTACGACAACTTCTAGAATACCATCTTGTCTGAATGTTAGAGAACATAGCCTGGGAT
JMFF047D07+           TCAGTACGACAACTTCTAGAATACCATCTTGTCTGAATGTTAGAGAACATAGCCTGGGAT
JMFF028E24+           TCAGTACGACAACTTCTAGAATACCATCTTGTCTGAATGTTAGAGAACATAGCCTGGGAT
                      ____________________________________________________________
consensus             TCAGTACGACAACTTCTAGAATACCATCTTGTCTGAATGTTAGAGAACATAGCCTGGGAT
 
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rJMFF047D07-          CCACTGCTCCTGGCAAACTGAATGATACGGTGAATGGTCCGGGTGGGCAAAGCTCTTGTA
rJMFF028E24-          CCACTGCTCCTGGCAAACTGAATGATACGGTGAATGGTCCGGGTGGGCAAAGCTCTTGTA
JMFF047D07+           CCACTGCTCCTGGCAAACTGAATGATACGGTGAATGGTCCGGGTGGGCAAAGCTCTTGTA
JMFF028E24+           CCACTGCTCCTGGCAAACTGAATGATACGGTGAATGGTCCGGGTGGGCAAAGCTCTTGTA
                      ____________________________________________________________
consensus             CCACTGCTCCTGGCAAACTGAATGATACGGTGAATGGTCCGGGTGGGCAAAGCTCTTGTA
 
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rJMFF047D07-          CATTCACTTGATAAACTTCAGAGGCGTTCTTT-AAAGTTGAGACTCTGAGATCATACCCT
rJMFF028E24-          CATTCACTTGATAAACTTCAGAGGCGTTCTTTAAAAGTTGAGACTCTGAGATCATACCCT
JMFF047D07+           CATTCACTTGATAAACTTCAGAGGCGTTCTTTAAAAGTTGAGACTCTGAGATCATACCCT
JMFF028E24+           CATTCACTTGATAAACTTCAGAGGCGTTCTTTAAAAGTTGAGACTCTGAGATCATACCCT
                      ____________________________________________________________
consensus             CATTCACTTGATAAACTTCAGAGGCGTTCTTTAAAAGTTGAGACTCTGAGATCATACCCT
 
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rJMFF047D07-          CTATCTGGACTTTGCCATCTCTCTGTATGT                              
rJMFF028E24-          CTATCTGGACTTTGCCATCTCTCTGTATGTCGCATTTTAAATTACCTTTATCTCTTACTC
JMFF047D07+           CTATCTGGACTTTGCCATCTCTCTGTATGTCGCATTTTAAATTACCTTTATCTCTTACTC
JMFF028E24+           CTATCTGGACTTTGCCATCTCTCTGTATGTCGCATTTTAAATTACCTTTATCTCTTACTC
                      ____________________________________________________________
consensus             CTATCTGGACTTTGCCATCTCTCTGTATGTCGCATTTTAAATTACCTTTATCTCTTACTC
 
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rJMFF028E24-          CAGGAAGGGACACTTGGAAAAGGTAAGCATACTCGCTCTCACCAATGTCAATCAAACCAA
JMFF047D07+           CAGGAAGGGACACTTGGAAAAGGTAAGCATACTCGCTCTCACCAATGTCAATCAAACCAA
JMFF028E24+           CAGGAAGGGACACTTGGAAAAGGTAAGCATACTCGCTCTCACCAATGTCAATCAAACCAA
                      ____________________________________________________________
consensus             CAGGAAGGGACACTTGGAAAAGGTAAGCATACTCGCTCTCACCAATGTCAATCAAACCAA
 
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rJMFF028E24-          GGGTCGGTCCAATGGCACCTTCTTTTGCAGTACCACTTAATGCTACNAGTGGTTTTACTT
JMFF047D07+           GGGTCGGTCCAATGGCACCTTCTTTTGCAGTACCACTTAATGCTACAAGTGGTTTTACTT
JMFF028E24+           GGGTCGGTCCAATGGCACCTTCTTTTGCAGTACCACTTAATGCTACAAGTGGTTTTACTT
                      ____________________________________________________________
consensus             GGGTCGGTCCAATGGCACCTTCTTTTGCAGTACCACTTAATGCTACAAGTGGTTTTACTT
 
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rJMFF028E24-          GANGGAGCTCTGCATGTTGATGAG                                    
JMFF047D07+           GAGGGAGCTCTGCATGTTGATGAGAACTCATGATCCCAGCCCTGTAAAGACGCTAGTATT
JMFF028E24+           GAGGGAGCTCTGCATGTTGATGAGAACTCATGATCCCAGCCCTGTAAAGACGCTAGTATT
                      ____________________________________________________________
consensus             GAGGGAGCTCTGCATGTTGATGAGAACTCATGATCCCAGCCCTGTAAAGACGCTAGTATT
 
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JMFF047D07+           CCTAGTAAAGGAAACGCGTCGCTAGTCGGAGACGATGAGAGAGCCGGAGTCAAGAAGTCA
JMFF028E24+           CCTAGTAAAGGAAACGCGTCGCTAGTCGGAGACGATGAGAGAGCCGGAGTCAAGAAGTCA
                      ____________________________________________________________
consensus             CCTAGTAAAGGAAACGCGTCGCTAGTCGGAGACGATGAGAGAGCCGGAGTCAAGAAGTCA