Contig 001698:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006M10Sequence568001698 (4)ref|XP_004251591.1|2e-23PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic [Solanum 822002519 (2)gb|ACQ57190.1|2e-62acyl acyl-carrier-protein thioesterase type B [Camellia oleifera]
JMFF027K15Sequence571001698 (4)ref|XP_004251591.1|3e-24PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic [Solanum 717001698 (4)gb|EYU23034.1|1e-111hypothetical protein MIMGU_mgv1a007000mg [Erythranthe guttata] gb|EYU23035.1| hy
JMFF030E23Sequence518001698 (4)ref|XP_006366870.1|5e-28PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Sol701002519 (2)gb|ACQ57190.1|4e-63acyl acyl-carrier-protein thioesterase type B [Camellia oleifera]

Alignment

This contig is upended


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rJMFF027K15-                                                          TTCAGTGCAAGA
                      ____________________________________________________________
consensus                                                             TTCAGTGCAAGA
 
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rJMFF027K15-          GATATGTATGGTTCATTCGGTATTTGGGTATAGGCATAGAACTGCTAATATCTATAAAGG
                      ____________________________________________________________
consensus             GATATGTATGGTTCATTCGGTATTTGGGTATAGGCATAGAACTGCTAATATCTATAAAGG
 
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rJMFF027K15-          ACAAAAAGATCTTCTGGATGCTTATACCTGGAAGCTCTCATTAAAGTGTCCCCAGTATAA
                      ____________________________________________________________
consensus             ACAAAAAGATCTTCTGGATGCTTATACCTGGAAGCTCTCATTAAAGTGTCCCCAGTATAA
 
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rJMFF027K15-          AAATCACGGAGAAGCCAATCACGTCGCATACCATTCTTTCCTGATGCAGCTACCCACGTA
                      ____________________________________________________________
consensus             AAATCACGGAGAAGCCAATCACGTCGCATACCATTCTTTCCTGATGCAGCTACCCACGTA
 
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rJMFF027K15-          TCTACTTCAACAAGATCACCCCAAGCAGGGTAACGATCCACAATAACCTGCATTTTACTG
                      ____________________________________________________________
consensus             TCTACTTCAACAAGATCACCCCAAGCAGGGTAACGATCCACAATAACCTGCATTTTACTG
 
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rJMFF027K15-          ACTACCCAAATCAAATTTTTCTTGCACATTTCCTGAGTTGAGCCAAACCCGTCACCCATG
                      ____________________________________________________________
consensus             ACTACCCAAATCAAATTTTTCTTGCACATTTCCTGAGTTGAGCCAAACCCGTCACCCATG
 
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rJMFF027K15-          ATTCCCACCGTCTTCACATGGTTCAGCGCAGTTTCCTGTAAATGATTCATCATTGTTTCT
                      ____________________________________________________________
consensus             ATTCCCACCGTCTTCACATGGTTCAGCGCAGTTTCCTGTAAATGATTCATCATTGTTTCT
 
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rJMFF027K15-          ATTGATGCAGTTCTATCAGCTCCTATTTCATAAGACCTGATACTAAAATTTTGACGAAAA
                      ____________________________________________________________
consensus             ATTGATGCAGTTCTATCAGCTCCTATTTCATAAGACCTGATACTAAAATTTTGACGAAAA
 
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rJMFF027K15-          ACAAAACTATCTTCAACAATTCTTCCCAAACCAAATGGATCAATGAGCATGTCAGGGCGC
                      ____________________________________________________________
consensus             ACAAAACTATCTTCAACAATTCTTCCCAAACCAAATGGATCAATGAGCATGTCAGGGCGC
 
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rJMFF027K15-          TTCGGCTTCCAATCTAGCATCATCCACTGCTTCTCAGCGGCCAAGAAAATAGTTGTTATG
                      ____________________________________________________________
consensus             TTCGGCTTCCAATCTAGCATCATCCACTGCTTCTCAGCGGCCAAGAAAATAGTTGTTATG
 
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rJMFF027K15-          GCTGCAAGAAGCATGCTCCAATCCGGCAGCTGATTGATAAATGTCTTTGAGGGATGTGAA
JMFF006M10+                                         TGATTGATAAATGTCTTTGAGGGATGTGAA
JMFF027K15+                                         TGATTGATAAATGTCTTTGAGGGATGTGAA
                      ____________________________________________________________
consensus             GCTGCAAGAAGCATGCTCCAATCCGGCAGCTGATTGATAAATGTCTTTGAGGGATGTGAA
 
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rJMFF027K15-          GTGGTCACCTCATCATCAGTCTTGAAGCCATCCATCACAGTTGTCACAGTTCCATTTACC
JMFF006M10+           GTGGTCACCTCATCATCAGTCTTGAAGCCATCCATCACAGTTGTCACAGTTCCATTTACC
JMFF027K15+           GTGGTCACCTCATCATCAGTCTTGAAGCCATCCATCACAGTTGTCACAGTTCCATTTACC
                      ____________________________________________________________
consensus             GTGGTCACCTCATCATCAGTCTTGAAGCCATCCATCACAGTTGTCACAGTTCCATTTACC
 
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rJMFF027K15-          TTTGGAGGCGCTTGTGCACTGGCCTTAACTTGCAAATTTCTAGCA               
JMFF006M10+           TTTGGAGGCGCTTGTGCACTGGCCTTAACTTGCAAATTTCTAGCAGTGGAGGATTTCAAC
JMFF027K15+           TTTGGAGGCGCTTGTGCACTGGCCTTAACTTGCAAATTTCTAGCAGTGGAGGATTTCAAC
                      ____________________________________________________________
consensus             TTTGGAGGCGCTTGTGCACTGGCCTTAACTTGCAAATTTCTAGCAGTGGAGGATTTCAAC
 
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JMFF006M10+           TTAATGCCTTGTGCGTCTATGCTTGCAGGTGCACTTCCTCCAAACTTTGCAGATGTTTTG
JMFF027K15+           TTAATGCCTTGTGCGTCTATGCTTGCAGGTGCACTTCCTCCAAACTTTGCAGATGTTTTG
                      ____________________________________________________________
consensus             TTAATGCCTTGTGCGTCTATGCTTGCAGGTGCACTTCCTCCAAACTTTGCAGATGTTTTG
 
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JMFF006M10+           GCACCAGATTCAGGGGGCACATGATGACCAAGGAAAAAAGCAGCAGTGGCAACCATGATG
JMFF027K15+           GCACCAGATTCAGGGGGCACATGATGACCAAGGAAAAAAGCAGCAGTGGCAACCATGATG
                      ____________________________________________________________
consensus             GCACCAGATTCAGGGGGCACATGATGACCAAGGAAAAAAGCAGCAGTGGCAACCATGATG
 
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JMFF030E23+                                CTTGAAGCATACGTGAGTGGAGTGAGTTAATATTGAGGA
JMFF006M10+           AAGTTATTATACCTCACTAGTCTTGAAGCATACGTGAGTGGAGTGAGTTAATATTGAGGA
JMFF027K15+           AAGTTATTATACCTCACTAGTCTTGAAGCATACGTGAGTGGAGTGAGTTAATATTGAGGA
                      ____________________________________________________________
consensus             AAGTTATTATACCTCACTAGTCTTGAAGCATACGTGAGTGGAGTGAGTTAATATTGAGGA
 
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JMFF030E23+           TGAATGCGTGGAAATGTACGAAAACAGAGAGTTCAATTCCTGATCAGCAACCCATATTTC
JMFF006M10+           TGAATGCGTGGAAATGTACGAAAACAGAGAGTTCAATTCCTGATCAGCAACCCATATTTC
JMFF027K15+           TGAATGAGTGGAAATGTACGAAAACAGAGAGTTCAATTCCTGATCAGCAACCCATATTTC
                      ____________________________________________________________
consensus             TGAATGCGTGGAAATGTACGAAAACAGAGAGTTCAATTCCTGATCAGCAACCCATATTTC
 
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JMFF030E23+           GAGAAGATTTCTTAGGGTTTGCAATCTTTTTTTCTTTTTTCTTCTTTATTATGAAATATG
JMFF006M10+           GAGAAGATTTCTTAGGGTTTGCAATCTTTTTTTCTTTTTTCTTCTTTATTATGAAATATG
JMFF027K15+           GAGAAGATTTCTTAGGGTTTGCAATCTTTTTTTCTTTTTTCTTCTTTATTATGAAATATG
                      ____________________________________________________________
consensus             GAGAAGATTTCTTAGGGTTTGCAATCTTTTTTTCTTTTTTCTTCTTTATTATGAAATATG
 
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JMFF030E23+           ATGATGATATTCTTGTATTCTTCGTTTTCTTAGACTTTTTGAAATAGCTGAGAAAAACTT
JMFF006M10+           ATGATGATATTCTTGTATTCTTCGTTTTCTTAGACTTTTTGAAATAGCTGAGAAAAACTT
JMFF027K15+           ATGATGATATTCTTGTATTCTTCGTTTTCTTAGACTTTTTGAAATAGCTGAGAAAAACTT
                      ____________________________________________________________
consensus             ATGATGATATTCTTGTATTCTTCGTTTTCTTAGACTTTTTGAAATAGCTGAGAAAAACTT
 
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JMFF030E23+           TGGCTCGGACTCTCGGAGAGAGAGAGAGAGAGAGAAGAAACAGCGGCTTTTTGAT     
JMFF006M10+           TGGCTCGGACTCTCGGAGAGAGAGAGAGAGAGAGAAGAAACAGCGGCTTTTTGAT     
JMFF027K15+           TGGCTCGGACTCTCGGAGAGAGAGAGAGAGAGAGAAGAAACAGCGGCTTTTTGATGATAG
                      ____________________________________________________________
consensus             TGGCTCGGACTCTCGGAGAGAGAGAGAGAGAGAGAAGAAACAGCGGCTTTTTGATGATAG