Contig 001697:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008D19Sequence397001697 (5)gb|AFQ23178.1|1e-37HSPRO [Nicotiana attenuata]642010985 (4)ref|XP_009613712.1|2e-80PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMFF021K09Sequence427001697 (5)gb|AFQ23178.1|5e-46HSPRO [Nicotiana attenuata]661010985 (4)ref|XP_009613712.1|1e-100PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMFF024B22Sequence490001697 (5)gb|AFQ23178.1|2e-85HSPRO [Nicotiana attenuata]797010985 (4)ref|XP_009613712.1|1e-89PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMFF027F18Sequence493001697 (5)gb|AFQ23178.1|5e-58HSPRO [Nicotiana attenuata]734010985 (4)ref|XP_009613712.1|7e-117PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tomentosiformis]
JMSF030F17Sequence635001697 (5)gb|AFQ23178.1|3e-82HSPRO [Nicotiana attenuata]671011000 (18)ref|XP_011092558.1|6e-96PREDICTED: 40S ribosomal protein S16-like [Sesamum indicum]

Alignment

This contig is upended


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JMFF024B22+ CAGGGAGTGAAGCTCCGACGGCTT
                      ____________________________________________________________
consensus CAGGGAGTGAAGCTCCGACGGCTT
 
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JMFF024B22+ CACGATCGCGTCGTAGTCGAGGCTCGGTTTTCCGGTGAGGTTCGGTTCGCCTAATCCAAC
                      ____________________________________________________________
consensus CACGATCGCGTCGTAGTCGAGGCTCGGTTTTCCGGTGAGGTTCGGTTCGCCTAATCCAAC
 
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JMFF024B22+ GGTGTACGAACACCGCCGCATCTCGCTTTCGATGGCGTAGAGAATCTTCTGAGCTATGTC
                      ____________________________________________________________
consensus GGTGTACGAACACCGCCGCATCTCGCTTTCGATGGCGTAGAGAATCTTCTGAGCTATGTC
 
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JMFF024B22+ CTCCGATTTGCGCCACGTCATCAGCCGAGGCAGCAAGCTAGCTTCGCTCGTGTGGCTCAC
JMSF030F17+ GGCAGCAAGCTAGCTTCGCTCGTGTGGCTCAC
                      ____________________________________________________________
consensus CTCCGATTTGCGCCACGTCATCAGCCGAGGCAGCAAGCTAGCTTCGCTCGTGTGGCTCAC
 
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JMFF024B22+ AACCGTCGTTTCGCCGGAGAGCTTCCACACCTCAGCCGAGCTGTTCTCACGTGACAACAC
JMSF030F17+ AACCGTCGTTTCGCCGGAGAGCTTCCACACCTCAGCCGAGCTGTTCTCACGTGACAACAC
                      ____________________________________________________________
consensus AACCGTCGTTTCGCCGGAGAGCTTCCACACCTCAGCCGAGCTGTTCTCACGTGACAACAC
 
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JMFF024B22+ CACGTCCGACGACGTCAGATCGACAATCGGAGCCGCGCCACGCGTCTCTCCATCATCCTC
JMSF030F17+ CACGTCCGACGACGTCAGATCGACAATCGGAGCCGCGCCACGCGTCTCTCCATCATCCTC
JMFF027F18+ CTCCATCATCCTC
                      ____________________________________________________________
consensus CACGTCCGACGACGTCAGATCGACAATCGGAGCCGCGCCACGCGTCTCTCCATCATCCTC
 
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JMFF024B22+ ACACAACATAGCAATAATCTCAACCTGACTCCGAGCAAGCGACTCCAACCGCCGCTTCCA
JMSF030F17+ ACACAACATAGCAATAATCTCAACCTGACTCCGAGCAAGCGACTCCAACCGCCGCTTCCA
JMFF021K09+ GCTTCCA
JMFF027F18+ ACACAACATAGCAATAATCTCAACCTGACTCCGAGCAAGCGACTCCAACCGCCGCTTCCA
                      ____________________________________________________________
consensus ACACAACATAGCAATAATCTCAACCTGACTCCGAGCAAGCGACTCCAACCGCCGCTTCCA
 
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JMFF024B22+ CTCCCGCCGGTTCGCGTACGGTCTAGGATCCGACAACACCA---GAACGAACCGGAAAGT
JMSF030F17+ CTCCCGCCGGTTCGCGTACGGTCTAGGATCCGACAACACCACAGAAACGAACCGGAAAGT
JMFF021K09+ CTCCCGCCGGTTCGCGTACGGTCTAGGATCCGACAACACCACAGAAACGAACCGGAAAGT
JMFF008D19+ TAGGATCCGACAACACCACAGAAACGAACCGGAAAGT
JMFF027F18+ CTCCCGCCGGTTCGCGTACGGTCTAGGATCCGACAACACCACAGAAACGAACCGGAAAGT
                      ____________________________________________________________
consensus CTCCCGCCGGTTCGCGTACGGTCTAGGATCCGACAACACCACAGAAACGAACCGGAAAGT
 
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JMFF024B22+ TATCTCCAACCCTTGCAGAGCCGGCGTGAGCAGCGCCTCGTTCTTCCAC
JMSF030F17+ TATCTCCAACCCTTGCAGAGCCGGCGTGAGCAGCGCCTCGTTCTTCCACCCCGGAAACTC
JMFF021K09+ TATCTCCAACCCTTGCAGAGCCGGCGTGAGCAGCGCCTCGTTCTTCCACCCCGGAAACTC
JMFF008D19+ TATCTCCAACCCTTGCAGAGCCGGCGTGAGCAGCGCCTCGTTCTTCCACCCCGGAAACTC
JMFF027F18+ TATCTCCAACCCTTGCAGAGCCGGCGTGAGCAGCGCCTCGTTCTTCCACCCCGGAAACTC
                      ____________________________________________________________
consensus TATCTCCAACCCTTGCAGAGCCGGCGTGAGCAGCGCCTCGTTCTTCCACCCCGGAAACTC
 
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JMSF030F17+ ATCACAACTCCACAGCTTCCTCAGCTCCGGCAGCCTCAAGTAGTACTCATAAGCGGAACA
JMFF021K09+ ATCACAACTCCACAGCTTCCTCAGCTCCGGCAGCCTCAAGTAGTACTCATAAGCGGAACA
JMFF008D19+ ATCACAACTCCACAGCTTCCTCAGCTCCGGCAGCCTCAAGTAGTACTCATAAGCGGAACA
JMFF027F18+ ATCACAACTCCACAGCTTCCTCAGCTCCGGCAGCCTCAAGTAGTACTCATAAGCGGAACA
                      ____________________________________________________________
consensus ATCACAACTCCACAGCTTCCTCAGCTCCGGCAGCCTCAAGTAGTACTCATAAGCGGAACA
 
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JMSF030F17+ AGCCGAGTCACTCGCCGTGGTCAACTCCCACACACGCGCCGGCGGCGCCGGTATAGAAAT
JMFF021K09+ AGCCGAGTCACTCGCCGTGGTCAACTCCCACACACGCGCCGGCGGCGCCGGTATAGAAAT
JMFF008D19+ AGCCGAGTCACTCGCCGTGGTCAACTCCCACACACGCGCCGGCGGCGCCGGTATAGAAAT
JMFF027F18+ AGCCGAGTCACTCGCCGTGGTCAACTCCCACACACGCGCCGGCGGCGCCGGTATAGAAAT
                      ____________________________________________________________
consensus AGCCGAGTCACTCGCCGTGGTCAACTCCCACACACGCGCCGGCGGCGCCGGTATAGAAAT
 
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JMSF030F17+ CTGATGCTGCTTATTCGAAATCCTAGGCGACGACTTACTGGACATATCAGGTGAAACCAT
JMFF021K09+ CTGATGCTGCTTATTCGAAATCCTAGGCGACGACTTACTGGACATATCAGGTGAAACCAT
JMFF008D19+ CTGATGCTGCTTATTCGAAATCCTAGGCGACGACTTACTGGACATATCAGGTGAAACCAT
JMFF027F18+ CTGATGCTGCTTATTCGAAATCCTAGGCGACGACTTACTGGACATATCAGGTGAAACCAT
                      ____________________________________________________________
consensus CTGATGCTGCTTATTCGAAATCCTAGGCGACGACTTACTGGACATATCAGGTGAAACCAT
 
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JMSF030F17+ CTCCGTCTTCCGATCAAAATCCAGCATTTTTCATAAAACCAAAGCAATCAAATCAACAAA
JMFF021K09+ CTCCGTCTTCCGATCAAAATCCAGCATTTTTCATAAAACCAAAGCAATCAAATCAACAAA
JMFF008D19+ CTCCGTCTTCCGATCAAAATCCAGCATTTTTCATAAAACCAAAGCAATCAAATCAACAAA
JMFF027F18+ CTCCGTCTTCCGATCAAAATCCAGCATTTTTCATAAAACCAAAGCAATCAAATCAACAAA
                      ____________________________________________________________
consensus CTCCGTCTTCCGATCAAAATCCAGCATTTTTCATAAAACCAAAGCAATCAAATCAACAAA
 
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JMSF030F17+ GAATGCAAGAACAAATATTCAATATTCAAAAAA
JMFF021K09+ GAATGCAAGAACAAATATTCAATATTCAAAAAATAAATAAATAAAGAAA
JMFF008D19+ GAATGCAAGAACAAATATTCAATATTCAAAAAA
JMFF027F18+ GAATGCAAGAACAAATATTCAATATTCAAAAAATAAATAAATAAAGAAATCCTTTACTTT
                      ____________________________________________________________
consensus GAATGCAAGAACAAATATTCAATATTCAAAAAATAAATAAATAAAGAAATCCTTTACTTT