Contig 001696:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J07Sequence449001696 (2)ref|XP_009601841.1|1e-09PREDICTED: BI1-like protein isoform X2 [Nicotiana tomentosiformis]715002601 (2)ref|XP_009625018.1|1e-81PREDICTED: vacuolar protein-sorting-associated protein 33 homolog [Nicotiana to
JMFF026N06Sequence555001696 (2)ref|XP_009601841.1|4e-15PREDICTED: BI1-like protein isoform X2 [Nicotiana tomentosiformis]797002601 (2)ref|XP_009625018.1|3e-83PREDICTED: vacuolar protein-sorting-associated protein 33 homolog [Nicotiana to

Alignment

This contig is upended


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JMFF026N06+                                                        AGCCAAGCCAGCTCC
                      ____________________________________________________________
consensus                                                          AGCCAAGCCAGCTCC
 
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JMFF026N06+           GGTGGATGCAAAGAAGTGTTTGATAGGGTGAACAGTGACGACGACGGCAGCAACTGCGAC
                      ____________________________________________________________
consensus             GGTGGATGCAAAGAAGTGTTTGATAGGGTGAACAGTGACGACGACGGCAGCAACTGCGAC
 
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JMFF026N06+           GGTGAGGAGGAGTTGGATACTCACAATCGAGTGCACCTTGCGAATGAATGACCACCAGAG
                      ____________________________________________________________
consensus             GGTGAGGAGGAGTTGGATACTCACAATCGAGTGCACCTTGCGAATGAATGACCACCAGAG
 
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JMFF026N06+           TTGCGGATTCTCGAGCATCGTGGGATATAGCTGCCGGCCTCCACGTCAGATTTCCGGTAA
                      ____________________________________________________________
consensus             TTGCGGATTCTCGAGCATCGTGGGATATAGCTGCCGGCCTCCACGTCAGATTTCCGGTAA
 
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JMFF026N06+           GGTTGGTTCCACATCTCGCCTCCGGTAACTGTTGCATTACCACGGTCAGTGACTTGTCAC
                      ____________________________________________________________
consensus             GGTTGGTTCCACATCTCGCCTCCGGTAACTGTTGCATTACCACGGTCAGTGACTTGTCAC
 
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JMFF005J07+                                                                     GT
JMFF026N06+           GGTGTGGTGCACATCGGCAGATCGTCGTCACCGTGGAGGTCGTGAGGCCAACGGCGTGGT
                      ____________________________________________________________
consensus             GGTGTGGTGCACATCGGCAGATCGTCGTCACCGTGGAGGTCGTGAGGCCAACGGCGTGGT
 
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JMFF005J07+           GGCGGTGAGGCGATCGAAGCAGACGGCGGATGAAGATTTTAGATCTGAGATGCGATTTTG
JMFF026N06+           GGCGGTGAGGCGATCGAAGCAGACGGCGGATGAAGATTTTAGATCTGAGATGCGATTTTG
                      ____________________________________________________________
consensus             GGCGGTGAGGCGATCGAAGCAGACGGCGGATGAAGATTTTAGATCTGAGATGCGATTTTG
 
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JMFF005J07+           ATGGCCGTGGCTGTGGCGGTGCGTCGCGGTGAACGAAGCAGACGACGGTAGGTGGCCGGC
JMFF026N06+           ATGGCCGTGGCTGTGGCGGTGCGTCGCGGTGAACGAAGCAGACGACGGTAGGTGGCCGGC
                      ____________________________________________________________
consensus             ATGGCCGTGGCTGTGGCGGTGCGTCGCGGTGAACGAAGCAGACGACGGTAGGTGGCCGGC
 
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JMFF005J07+           GGCGTCAGACTATCGGCAGACGGTGTTGAAGATTGGAGCAGATCGGTAGGTCGGAGCAGA
JMFF026N06+           GGCGTCAGACTATCGGCAGACGGTGTTGAAGATTGGAGCAGATCGGTAGGTCGGAGCAGA
                      ____________________________________________________________
consensus             GGCGTCAGACTATCGGCAGACGGTGTTGAAGATTGGAGCAGATCGGTAGGTCGGAGCAGA
 
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JMFF005J07+           CTGTGTTGGGTATGAGAGGAT                                       
JMFF026N06+           CTGTGTTGGGTATGAGAGGATGAGCAGACGCGGTGTTGGGTATGAGAGGATGAGCATACC
                      ____________________________________________________________
consensus             CTGTGTTGGGTATGAGAGGATGAGCAGACGCGGTGTTGGGTATGAGAGGATGAGCATACC