Contig 001695:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007C11Sequence589001695 (7)ref|XP_011074970.1|3e-90PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]760002521 (7)gb|KDO42760.1|4e-99hypothetical protein CISIN_1g014592mg [Citrus sinensis]
JMFF013M17Sequence586001695 (7)ref|XP_011074970.1|3e-90PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]787002521 (7)gb|KDO42760.1|2e-100hypothetical protein CISIN_1g014592mg [Citrus sinensis]
JMFF018E11Sequence581001695 (7)ref|XP_011074970.1|8e-89PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]796002521 (7)gb|KDO42760.1|5e-99hypothetical protein CISIN_1g014592mg [Citrus sinensis]
JMFF026M01Sequence591001695 (7)ref|XP_011074970.1|5e-90PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]636002521 (7)gb|KDO42760.1|4e-102hypothetical protein CISIN_1g014592mg [Citrus sinensis]
JMFF037H10Sequence644001695 (7)ref|XP_011074970.1|8e-99PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]773002521 (7)gb|KDO42760.1|4e-99hypothetical protein CISIN_1g014592mg [Citrus sinensis]
JMSF026B22Sequence646001695 (7)ref|XP_011074970.1|1e-113PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]744002521 (7)gb|KDO42760.1|1e-98hypothetical protein CISIN_1g014592mg [Citrus sinensis]
JMSF027B22Sequence446001695 (7)ref|XP_011074970.1|4e-68PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]642002521 (7)gb|KDO42760.1|9e-90hypothetical protein CISIN_1g014592mg [Citrus sinensis]

Alignment

This contig is upended


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JMSF026B22+                                      CAATGTCCAGAAATATCTCTCAACATGTGGGAA
                      ____________________________________________________________
consensus                                        CAATGTCCAGAAATATCTCTCAACATGTGGGAA
 
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JMSF026B22+           TTCCTTGGTGAAGCTCTTAGTCATGATCCACTTAAATCCAATGCTCAAGTTGCAGATCAT
                      ____________________________________________________________
consensus             TTCCTTGGTGAAGCTCTTAGTCATGATCCACTTAAATCCAATGCTCAAGTTGCAGATCAT
 
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JMSF026B22+           AACAATGTCGGCTAGTGTGACAGAATGCCCAACCAAGTAAGTGTTAGAGGCAAGATGGGT
JMFF013M17+                     GCTAGTGTGACAGAATGCCCAACCAAGTAAGTGTTAGAGGCAAGATGGGT
JMFF018E11+                            TGACAGAATGCCCAACCAAGTAAGTGTTAGAGGCAAGATGGGT
JMFF007C11+                    GGCTAGTGTGACAGAATGCCCAACCAAGTAAGTGTTAGAGGCAAGATGGGT
JMFF026M01+                    GGCTAGTGTGACAGAATGCCCANCCAAGTAAGTGTTAGAGGCAAGATGGGT
                      ____________________________________________________________
consensus             AACAATGTCGGCTAGTGTGACAGAATGCCCAACCAAGTAAGTGTTAGAGGCAAGATGGGT
 
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JMSF026B22+           GTTCAAAGCAGTAAGCGATCTCTTCAGCGAAGCAATTGCAGCTTCCTCAGCCGGAGGCAA
JMFF013M17+           GTTCAAAGCAGTAAGCGATCTCTTCAGCGAAGCAATTGCAGCTTCCTCAGCCGGAGGCAA
JMFF018E11+           GTTCAAAGCAGTAAGCGATCTCTTCAGCGAAGCAATTGCAGCTTCCTCAGCCGGAGGCAA
JMFF007C11+           GTTCAAAGCAGTAAGCGATCTCTTCAGCGAAGCAATTGCAGCTTCCTCAGCCGGAGGCAA
JMSF027B22+                                                          CAGCCGGAGGCAA
JMFF026M01+           GTTCAAAGCAGTAAGCGATCTCTTCAGCGAAGCAATTGCAGCTTCCTCAGCCGGAGGCAA
                      ____________________________________________________________
consensus             GTTCAAAGCAGTAAGCGATCTCTTCAGCGAAGCAATTGCAGCTTCCTCAGCCGGAGGCAA
 
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JMSF026B22+           ATATATCACAAATCCAAGGCGTGGGTACAACCATTTTGCGGTATTAGCATCAATCTCTGT
JMFF013M17+           ATATATCACAAATCCAAGGCGTGGGTACAACCATTTTGCGGTATTAGCATCAATCTCTGT
JMFF018E11+           ATATATCACAAATCCAAGGCGTGGGTACAACCATTTTGCGGTATTAGCATCAATCTCTGT
JMFF007C11+           ATATATCACAAATCCAAGGCGTGGGTACAACCATTTTGCGGTATTAGCATCAATCTCTGT
JMSF027B22+           ATATATCACAAATCCAAGGCGTGGGTACAACCATTTTGCGGTATTAGCATCAATCTCTGT
JMFF037H10+                                                          CATCAATCTCTGT
JMFF026M01+           ATATATCACAAATCCAAGGCGTGGGTACAACCATTTTGCGGTATTAGCATCAATCTCTGT
                      ____________________________________________________________
consensus             ATATATCACAAATCCAAGGCGTGGGTACAACCATTTTGCGGTATTAGCATCAATCTCTGT
 
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JMSF026B22+           AGCAGCAAAGTCAGTCCATTGTTCAATGTGGCCATATTCAATTAATGAAGAGCCAAAAAG
JMFF013M17+           AGCAGCAAAGTCAGTCCATTGTTCAATGTGGCCATATTCAATTAATGAAGAGCCAAAAAG
JMFF018E11+           AGCAGCAAAGTCAGTCCATTGTTCAATGTGGCCATATTCAATTAATGAAGAGCCAAAAAG
JMFF007C11+           AGCAGCAAAGTCAGTCCATTGTTCAATGTGGCCATATTCAATTAATGAAGAGCCAAAAAG
JMSF027B22+           AGCAGCAAAGTCAGTCCATTGTTCAATGTGGCCATATTCAATTAATGAAGAGCCAAAAAG
JMFF037H10+           AGCAGCAAAGTCAGTCCATTGTTCAATGTGGCCATATTCAATTAATGAAGAGCCAAAAAG
JMFF026M01+           AGCAGCAAAGTCAGTCCATTGTTCAATGTGGCCATATTCAATTAATGAAGAGCCAAAAAG
                      ____________________________________________________________
consensus             AGCAGCAAAGTCAGTCCATTGTTCAATGTGGCCATATTCAATTAATGAAGAGCCAAAAAG
 
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JMSF026B22+           TGGATTGTCAGGCTTCACCTTAGCAACATAGCGTGCAATGGCATTGCTCTCAAATATAGG
JMFF013M17+           TGGATTGTCAGGCTTCACCTTAGCAACATAGCGTGCAATGGCATTGCTCTCAAATATAGG
JMFF018E11+           TGGATTGTCAGGCTTCACCTTAGCAACATAGCGTGCAATGGCATTGCTCTCAAATATAGG
JMFF007C11+           TGGATTGTCAGGCTTCACCTTAGCAACATAGCGTGCAATGGCATTGCTCTCAAATATAGG
JMSF027B22+           TGGATTGTCAGGCTTCACCTTAGCAACATAGCGTGCAATGGCATTGCTCTCAAATATAGG
JMFF037H10+           TGGATTGTCAGGCTTCACCTTAGCAACATAGCGTGCAATGGCATTGCTCTCAAATATAGG
JMFF026M01+           TGGATTGTCAGGCTTCACCTTAGCAACATAGCGTGCAATGGCATTGCTCTCAAATATAGG
                      ____________________________________________________________
consensus             TGGATTGTCAGGCTTCACCTTAGCAACATAGCGTGCAATGGCATTGCTCTCAAATATAGG
 
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JMSF026B22+           ACCATCGGGTGTTTCAAGCACAGGAACCTTTCCAATTGGGTTCATCTTAAGAAACTCGGG
JMFF013M17+           ACCATCGGGTGTTTCAAGCACAGGAACCTTTCCAATTGGGTTCATCTTAAGAAACTCGGG
JMFF018E11+           ACCATCGGGTGTTTCAAGCACAGGAACCTTTCCAATTGGGTTCATCTTAAGAAACTCGGG
JMFF007C11+           ACCATCGGGTGTTTCAAGCACAGGAACCTTACCAATTGGGTTCATCTTAAGAAACTCGGG
JMSF027B22+           ACCATCGGGTGTTTCAAGCACAGGAACCTTTCCAATTGGGTTCATCTTAAGAAACTCGGG
JMFF037H10+           ACCATCGGGTGTTTCAAGCACAGGAACCTTTCCAATTGGGTTCATCTTAAGAAACTCGGG
JMFF026M01+           ACCATCGGGTGTTTCAAGCACAGGAACCTTTCCAATTGGGTTCATCTTAAGAAACTCGGG
                      ____________________________________________________________
consensus             ACCATCGGGTGTTTCAAGCACAGGAACCTTTCCAATTGGGTTCATCTTAAGAAACTCGGG
 
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JMSF026B22+           AGTCTTGTTTGACACACCCATCTGAAAGTTCTTCGTAAGCTCAACTTTCACACCACAGTA
JMFF013M17+           AGTCTTGTTTGACACACCCATCTGAAAGTTCTTCGTAAGCTCAACTTTCACACCACAGTA
JMFF018E11+           AGTCTTGTTTGACACACCCATCTGAAAGTTCTTCGTAAGCTCAACTTTCACACCACAGTA
JMFF007C11+           AGTCTTGTTTGACACACCCATCTGAAAGTTCTTCGTAAGCTCAACTTTCACACCACAGTA
JMSF027B22+           AGTCTTGTTTGACACACCCATCTGAAAGTTNTTCGTAAGCTCAACTTTCACACCACAGTA
JMFF037H10+           AGTCTTGTTTGACACACCCATCTGAAAGTTCTTCGTAAGCTCAACTTTCACACCACAGTA
JMFF026M01+           AGTCTTGTTTGACACACCCATCTGAAAGTTCTTCGTAAGCTCAACTTTCACACCACAGTA
                      ____________________________________________________________
consensus             AGTCTTGTTTGACACACCCATCTGAAAGTTCTTCGTAAGCTCAACTTTCACACCACAGTA
 
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JMSF026B22+           TTCCGCAACAATGAGTGCCTTGAATGCGTTTTTGTTTTCATTGGGAGAATGCAGAACCAG
JMFF013M17+           TTCCGCAACAATGAGTGCCTTGAATGCGTTTTTGTTTTCATTGGGAGAATGCAGAACCAG
JMFF018E11+           TTCCGCAACAATGAGTGCCTTGAATGCGTTTTTGTTTTCATTGGGAGAATGCAGAACCAG
JMFF007C11+           TTCCGCAACAGTGAGTGCCTTGAATGCGTTTTTGTTTTCATTGGGAGAATGCAGAACCAG
JMSF027B22+           TTCCGCAACAATGAGTGCCTNGAATGCGTTTTTGTTTTCATTGGGAGAATGCAGAACCAG
JMFF037H10+           TTCCGCAACAATGAGTGCCTTGAATGCGTTTTTGTTTTCATTGGGAGAATGCAGAACCAG
JMFF026M01+           TTCCGCAACAATGAGTGCCTTGAATGCGTTTTTGTTTTCATTGGGAGAATGCAGAACCAG
                      ____________________________________________________________
consensus             TTCCGCAACAATGAGTGCCTTGAATGCGTTTTTGTTTTCATTGGGAGAATGCAGAACCAG
 
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JMSF026B22+           AGCCATGGCTTCAGATTAGAAACTTCCAACACAATTTTCCCACCACAGCTACTTGTTCTG
JMFF013M17+           AGCCATGGCTTCAGATTAGAAACTTCCAACACAATTTTCCCACCACAGCTACTTGTTCTG
JMFF018E11+           AGCCATGGCTTCAGATTAGAAACTTCCAACACAATTTTCCCACCACAGCTACTTGTTCTG
JMFF007C11+           AGCCATGGCTTCAGATTAGAAACTTCCAACACAATTTTCCCACCACAGCTACTTGTTCTG
JMSF027B22+           AGCCATGGCTTCAGATTAGAAACTTCCAACACAATTTTCCCACCACAGCTACTTGTTNTG
JMFF037H10+           AGCCATGGCTTCAGATTAGAAACTTCCAACACAATTTTCCCACCACAGCTACTTGTTCTG
JMFF026M01+           AGCCATGGCTTCAGATTAGAAACTTCCAACACAATTTTCCCACCACAGCTACTTGTTCTG
                      ____________________________________________________________
consensus             AGCCATGGCTTCAGATTAGAAACTTCCAACACAATTTTCCCACCACAGCTACTTGTTCTG
 
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JMSF026B22+           AGAAACCGCCG                                                 
JMFF013M17+           AGAAACCGCCGTAGGCCACTTCACTTGCAGGAGTGGGGTTTAGGGTTTCGATCGAG    
JMFF018E11+           AGAAACCGCCGTAGGCCACTTCACTTGCAGGAGTGGGGTTTAGGGTTTCGATCGAGAG  
JMFF007C11+           AGAAACCGCCGTAGGCCACTTCACTTGCAGGAGTGGGGTTTAGGGTTTCGATCAAGAG  
JMSF027B22+           AGAAACCGCCG                                                 
JMFF037H10+           AGAAACCGCCGTAGGCCACTTCACTTGCAGGAGTGGGGTTTAGGGTTTCGATCGAGAG  
JMFF026M01+           AGAAACCGCCGTAGGCCACTTCACTTGCAGGAGTGGGGTTTAGGGTTTCGATCGAGAGGT
                      ____________________________________________________________
consensus             AGAAACCGCCGTAGGCCACTTCACTTGCAGGAGTGGGGTTTAGGGTTTCGATCGAGAGGT