Contig 001691:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011G15Sequence529001691 (6)735012252 (6)emb|CDP08361.1|4e-30unnamed protein product [Coffea canephora]
JMFF019P24Sequence539001691 (6)736012252 (6)emb|CDP08361.1|2e-32unnamed protein product [Coffea canephora]
JMFF020J08Sequence520001691 (6)751012252 (6)emb|CDP08361.1|7e-33unnamed protein product [Coffea canephora]
JMFF025A03Sequence544001691 (6)750012252 (6)emb|CDP08361.1|8e-34unnamed protein product [Coffea canephora]
JMFF025K04Sequence549001691 (6)737012252 (6)emb|CDP08361.1|2e-32unnamed protein product [Coffea canephora]
JMFF032A07Sequence501001691 (6)652012252 (6)emb|CDP08361.1|1e-27unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF025K04+                                                             CTTCTGAAGG
                      ____________________________________________________________
consensus                                                               CTTCTGAAGG
 
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JMFF019P24+           TCTATAACCCCCTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF011G15+                      CTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF020J08+                               CGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF032A07+                                   GTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF025A03+           TCTATAACCCCCTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF025K04+           TCTATAACCCCCTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
                      ____________________________________________________________
consensus             TCTATAACCCCCTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
 
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JMFF019P24+           TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF011G15+           TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF020J08+           TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF032A07+           TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF025A03+           TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF025K04+           TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
                      ____________________________________________________________
consensus             TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
 
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JMFF019P24+           TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF011G15+           TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF020J08+           TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF032A07+           TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF025A03+           TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF025K04+           TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
                      ____________________________________________________________
consensus             TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
 
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JMFF019P24+           GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF011G15+           GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF020J08+           GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF032A07+           GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF025A03+           GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF025K04+           GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
                      ____________________________________________________________
consensus             GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
 
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JMFF019P24+           GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF011G15+           GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF020J08+           GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF032A07+           GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF025A03+           GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF025K04+           GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
                      ____________________________________________________________
consensus             GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
 
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JMFF019P24+           ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF011G15+           ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF020J08+           ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF032A07+           ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF025A03+           ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF025K04+           ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
                      ____________________________________________________________
consensus             ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
 
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JMFF019P24+           CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF011G15+           CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF020J08+           CACTTGAGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF032A07+           CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF025A03+           CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF025K04+           CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
                      ____________________________________________________________
consensus             CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
 
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JMFF019P24+           GAGATTATTGAATAGT-AAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF011G15+           GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF020J08+           GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF032A07+           GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF025A03+           GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF025K04+           GAGATTACTGAATAGT-AAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
                      ____________________________________________________________
consensus             GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
 
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JMFF019P24+           TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT
JMFF011G15+           TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT
JMFF020J08+           TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAG 
JMFF032A07+           TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTT               
JMFF025A03+           TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT
JMFF025K04+           TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT
                      ____________________________________________________________
consensus             TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT