Contig 001691:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011G15Sequence529001691 (6)735012252 (6)emb|CDP08361.1|4e-30unnamed protein product [Coffea canephora]
JMFF019P24Sequence539001691 (6)736012252 (6)emb|CDP08361.1|2e-32unnamed protein product [Coffea canephora]
JMFF020J08Sequence520001691 (6)751012252 (6)emb|CDP08361.1|7e-33unnamed protein product [Coffea canephora]
JMFF025A03Sequence544001691 (6)750012252 (6)emb|CDP08361.1|8e-34unnamed protein product [Coffea canephora]
JMFF025K04Sequence549001691 (6)737012252 (6)emb|CDP08361.1|2e-32unnamed protein product [Coffea canephora]
JMFF032A07Sequence501001691 (6)652012252 (6)emb|CDP08361.1|1e-27unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF025K04+ CTTCTGAAGG
                      ____________________________________________________________
consensus CTTCTGAAGG
 
. : . : . : . : . : . :
JMFF019P24+ TCTATAACCCCCTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF011G15+ CTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF020J08+ CGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF032A07+ GTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF025A03+ TCTATAACCCCCTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
JMFF025K04+ TCTATAACCCCCTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
                      ____________________________________________________________
consensus TCTATAACCCCCTGAAAAACCGTTGTTGCTGCCAAAGGCATTCTCAGTGTCTATAGAATC
 
. : . : . : . : . : . :
JMFF019P24+ TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF011G15+ TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF020J08+ TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF032A07+ TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF025A03+ TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
JMFF025K04+ TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
                      ____________________________________________________________
consensus TTGATTGAACCCACGGCCACGACCAACACCACGGCCACGTCCACCACGGGGGCCACCACG
 
. : . : . : . : . : . :
JMFF019P24+ TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF011G15+ TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF020J08+ TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF032A07+ TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF025A03+ TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
JMFF025K04+ TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
                      ____________________________________________________________
consensus TCCTCGCTGAAAGTCAGTTTTGGACTCCCTTACAGCCTCAGCCGGGGGCAAAGGCTTGGA
 
. : . : . : . : . : . :
JMFF019P24+ GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF011G15+ GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF020J08+ GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF032A07+ GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF025A03+ GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
JMFF025K04+ GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
                      ____________________________________________________________
consensus GGGCATCTTGGCGGCGGCGGCGGCGGGCTTCGGCGACTGAGCCTGAACAGGCCCTTTCTT
 
. : . : . : . : . : . :
JMFF019P24+ GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF011G15+ GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF020J08+ GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF032A07+ GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF025A03+ GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
JMFF025K04+ GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
                      ____________________________________________________________
consensus GGCAGCCGGGGCGGAAGGTGGAAGCTTTTGCTGCTGAGCAGCGAGGAGCTGAGATGGGTC
 
. : . : . : . : . : . :
JMFF019P24+ ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF011G15+ ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF020J08+ ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF032A07+ ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF025A03+ ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
JMFF025K04+ ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
                      ____________________________________________________________
consensus ATCGTTGTCATCGTCACCCAGAAGGTCAAACGGGTTCATGGTCGCCATTCCTCGGACTTT
 
. : . : . : . : . : . :
JMFF019P24+ CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF011G15+ CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF020J08+ CACTTGAGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF032A07+ CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF025A03+ CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
JMFF025K04+ CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
                      ____________________________________________________________
consensus CACTTGGGTGTAGAAATAGAGAGATACAGAAAGATGTATCTAATTCCCGAATCTTCAACA
 
. : . : . : . : . : . :
JMFF019P24+ GAGATTATTGAATAGT-AAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF011G15+ GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF020J08+ GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF032A07+ GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF025A03+ GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
JMFF025K04+ GAGATTACTGAATAGT-AAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
                      ____________________________________________________________
consensus GAGATTACTGAATAGTAAAGAAAGTCTACTGATTGGACTCCATGGAAATGGATCAAAAGA
 
. : . : . : . : . : . :
JMFF019P24+ TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT
JMFF011G15+ TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT
JMFF020J08+ TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAG
JMFF032A07+ TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTT
JMFF025A03+ TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT
JMFF025K04+ TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT
                      ____________________________________________________________
consensus TAAACGGAGAGCTGGAGAGACAGAAAACGGGGATTCTGAAACCTTAACAAAGGCGGCAGT