Contig 001687:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017K06Sequence549001687 (13)ref|XP_004232206.1|1e-39PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]750006945 (12)ref|NP_568565.2|3e-20uncharacterized protein [Arabidopsis thaliana] sp|Q9FKA5.1|Y5957_ARATH RecName:
JMFF020H23Sequence546001687 (13)ref|XP_004232206.1|9e-40PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]690006945 (12)ref|XP_002870774.1|3e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF023G16Sequence541001687 (13)ref|XP_004232206.1|9e-38PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]741006945 (12)ref|XP_002870774.1|1e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF025A12Sequence284001687 (13)ref|XP_006338424.1|2e-24PREDICTED: uncharacterized protein At5g39570-like [Solanum tuberosum]656006945 (12)ref|XP_002870774.1|9e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF030E18Sequence549001687 (13)ref|XP_004232206.1|2e-39PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]690006945 (12)ref|XP_002870774.1|3e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF044D01Sequence647001687 (13)ref|XP_004232206.1|8e-43PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]612006945 (12)ref|XP_002870774.1|2e-15predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMFF046J13Sequence547001687 (13)ref|XP_004232206.1|3e-39PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]485006945 (12)
JMFN011B21Sequence617001687 (13)ref|XP_004232206.1|9e-46PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]
JMFN016O07Sequence642001687 (13)ref|XP_004232206.1|9e-44PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]
JMFN035A02Sequence629001687 (13)ref|XP_004232206.1|5e-44PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]
JMFN040M10Sequence649001687 (13)ref|XP_004232206.1|8e-44PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]
JMSF021A24Sequence616001687 (13)ref|XP_004232206.1|9e-45PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]754006945 (12)ref|XP_002870774.1|1e-20predicted protein [Arabidopsis lyrata subsp. lyrata] gb|EFH47033.1| predicted pr
JMSF029B20Sequence529001687 (13)ref|XP_004232206.1|3e-35PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFN035A02+                                                             CGGATTCGGA
JMFN016O07+                                                                      A
JMFN040M10+                                                                      A
                      ____________________________________________________________
consensus                                                               CGGATTCGGA
 
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JMFN035A02+           TTCGTTACGACGCCCATATCCAGATCCGTATTCGGATCCTCCCTCTTCGTATGAAGGTTT
JMFN016O07+           TTCGTTACGACGCCCATATCCAGATCCGTATTCGGATCCTCCCTCTTCGTATGAAGGTTT
JMFN040M10+           TTCGTTACGACGCCCATATCCAGATCCGTATTCGGATCCTCCCTCTTCGTATGAAGGTTT
JMFN011B21+                                     CGTATTCGGATCCTCCCTCTTCGTATGAAGGTTT
JMSF021A24+                                                     CTCTTCGTATGAAGGTTT
JMFF044D01+                        CCATATCCAGATCCGTATTCGGATCCTCCCTCTTCGTATGAAGGTTT
                      ____________________________________________________________
consensus             TTCGTTACGACGCCCATATCCAGATCCGTATTCGGATCCTCCCTCTTCGTATGAAGGTTT
 
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JMFN035A02+           CCGCCTATTGCCAGATCCGTACTCGGAATCGGGCCTTTCGTCTTCGTTCCTGCGTCCATA
JMFN016O07+           CCGCCTATTGCCAGATCCGTACTCGGAATCGGGCCTTTCGTCTTCGTTCCTGCGTCCATA
JMFN040M10+           CCGCCTATTGCCAGATCCGTACTCGGAATCGGGCCTTTCGTCTTCGTTCCTGCGTCCATA
JMFN011B21+           CCGCCTATTGCCAGATCCGTACTCGGAATCGGGCCTTTCGTCTTCGTTCCTGCGTCCATA
JMSF021A24+           CCGCCTATTGCCAGATCCGTACTCGGAATCGGGCCTTTCGTCTTCGTTCCTGCGTCCATA
JMFF046J13+                                                             TGCGTCCATA
JMFF017K06+                                                           CCTGCGTCCATA
JMFF030E18+                                                           CCTGCGTCCATA
JMFF020H23+                                                          TCCTGCGTCCATA
JMFF023G16+                                                                   CATA
JMFF044D01+           CCGCCTATTGCCAGATCCGTACTCGGAATCGGGCCTNTCGTCTTCGTTCCTGCGTCCATA
                      ____________________________________________________________
consensus             CCGCCTATTGCCAGATCCGTACTCGGAATCGGGCCTTTCGTCTTCGTTCCTGCGTCCATA
 
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JMFN035A02+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
JMFN016O07+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
JMFN040M10+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
JMFN011B21+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
JMSF021A24+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
JMFF046J13+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
JMFF017K06+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTTAGAATCGGG
JMFF030E18+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGACCCATATTCAGAATCGGG
JMFF020H23+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
JMFF023G16+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
JMSF029B20+                    ATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
JMFF044D01+           TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
                      ____________________________________________________________
consensus             TCCGGATCCATATTCAGAACTCGGCTTACGGCCATGCCCCGATCCATATTCAGAATCGGG
 
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JMFN035A02+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMFN016O07+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMFN040M10+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMFN011B21+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMSF021A24+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMFF046J13+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMFF017K06+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMFF030E18+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMFF020H23+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMFF023G16+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMSF029B20+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
JMFF044D01+           TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
                      ____________________________________________________________
consensus             TCTCTCATACCCCGATCCATATTCAGAACTGGGCCTCTGTTGCTCTGGTCTACGACCATA
 
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JMFN035A02+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMFN016O07+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMFN040M10+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMFN011B21+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMSF021A24+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMFF046J13+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMFF017K06+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMFF030E18+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMFF020H23+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMFF023G16+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMSF029B20+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
JMFF044D01+           TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
                      ____________________________________________________________
consensus             TCCACCTTCAGATCCGTACTCGGATTCACCACCATAGCCTCCTCCTCCACCGGGGCGACG
 
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JMFN035A02+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMFN016O07+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMFN040M10+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMFN011B21+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMSF021A24+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMFF046J13+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMFF017K06+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMFF030E18+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMFF020H23+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMFF023G16+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMSF029B20+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
JMFF044D01+           ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
                      ____________________________________________________________
consensus             ATTATAACCCGCCTCGGATGAGCCCCCATAGGAAGGGCCGGGTCGAGGCTTGGGTTTGGC
 
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JMFN035A02+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFN016O07+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFN040M10+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFN011B21+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMSF021A24+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFF046J13+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFF017K06+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFF030E18+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFF020H23+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFF023G16+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMSF029B20+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFF044D01+           ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
JMFF025A12+                           TTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
                      ____________________________________________________________
consensus             ATAGCTCTTGTACTCGTTGTCAAGAGCCTCGTCGGCATAGGCAGATGGCTCAGCATGGGA
 
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JMFN035A02+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFN016O07+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFN040M10+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFN011B21+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMSF021A24+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFF046J13+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFF017K06+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFF030E18+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFF020H23+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFF023G16+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMSF029B20+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFF044D01+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
JMFF025A12+           GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
                      ____________________________________________________________
consensus             GGTGTATTGGGGACGATCATAGTCAAAGTCGCCGGAGGCGGAGGAGATGGGATAGCAGGT
 
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JMFN035A02+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFN016O07+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFN040M10+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFN011B21+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMSF021A24+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFF046J13+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFF017K06+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFF030E18+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFF020H23+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFF023G16+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMSF029B20+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFF044D01+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
JMFF025A12+           CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
                      ____________________________________________________________
consensus             CTCCTCCGATGGCGAAATGGGACGGCCGTACGTCACAGTAATGTCGTATCCACCGTCGTA
 
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JMFN035A02+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFN016O07+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFN040M10+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFN011B21+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMSF021A24+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFF046J13+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFF017K06+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFF030E18+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFF020H23+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFF023G16+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMSF029B20+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFF044D01+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
JMFF025A12+           AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
                      ____________________________________________________________
consensus             AGGAGTTGGATCGAACTCATCGAAGTCGTCGACGTCATCGTCGCCGGCGTGGTGGCCTTT
 
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JMFN035A02+           CGGGTAGTAAGACATGGTT                                         
JMFN016O07+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTG                   
JMFN040M10+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTG                   
JMFN011B21+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCT                 
JMSF021A24+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTGGATAAGC   
JMFF046J13+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTGGATAAGC   
JMFF017K06+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTGGATAAGC   
JMFF030E18+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTGGATAA     
JMFF020H23+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTG          
JMFF023G16+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTGGATAAGC   
JMSF029B20+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTGGATAAGC   
JMFF044D01+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTGGATAAGC   
JMFF025A12+           CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTGGATAAGCGAT
                      ____________________________________________________________
consensus             CGGGTAGTAAGACATGGTTGATTTTGGTTCTTCTGGAGCTGCTTGCTTTGGATAAGCGAT