Contig 001686:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS115G05+                                                                  TTTTA
JMSF052C13+                                  CNGGGGGTGCTTCTCTCCAAAAATGCTCAAATTTTTA
                      ____________________________________________________________
consensus                                    CNGGGGGTGCTTCTCTCCAAAAATGCTCAAATTTTTA
 
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JMFS115G05+           AGAAAATCCATAAACATTTTAAATTCCGCTCCTGTCACATCTTGCAGACTCTTTTTTATC
JMSF052C13+           AGAAAATCCATAAACATTTTAAATTCCGCTCCTGTCACATCTTGCAGACTCTTTTTTATC
                      ____________________________________________________________
consensus             AGAAAATCCATAAACATTTTAAATTCCGCTCCTGTCACATCTTGCAGACTCTTTTTTATC
 
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JMFS115G05+           AAATCAGTTATATGTCTTTCCATTTGATCTGGGGGCTTCAAGAGCTCAGTTTTAATAGGA
JMSF052C13+           AAATCAGTTATATGTCTTTCCATTTGATCTGGGGGCTTCAAGAGCTCAGTTTTAATAGGA
                      ____________________________________________________________
consensus             AAATCAGTTATATGTCTTTCCATTTGATCTGGGGGCTTCAAGAGCTCAGTTTTAATAGGA
 
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JMFS115G05+           AAAACCTTGTCTCTAATAAATATCAATGTCCTCTCACGGAGATTTTCATCAGTCATCTGC
JMSF052C13+           AAAACCTTGTCTCTAATAAATATCAATGTCCTCTCACGGAGATTTTCATCAGTCATCTGC
                      ____________________________________________________________
consensus             AAAACCTTGTCTCTAATAAATATCAATGTCCTCTCACGGAGATTTTCATCAGTCATCTGC
 
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JMFS115G05+           TCATCAATACTCTCAATGTGTTTAAAGAGAGCTGTCAATGAAGCTTTCACATCCTGCCTC
JMSF052C13+           TCATCAATACTCTCAATGTGTTTAAAGAGAGCTGTCAATGAAGCTTTCACATCCTGCCTC
JMFF024P24+                            GTGTTTAAAGAGAGCTGTCAATGAAGCTTTCACATCNTGCCTC
                      ____________________________________________________________
consensus             TCATCAATACTCTCAATGTGTTTAAAGAGAGCTGTCAATGAAGCTTTCACATCCTGCCTC
 
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JMFS115G05+           AATAAGGATAAAAGGGCTTTATGTACCGCATCGCGTTCCACATTTTCTTCAGCAGTAAGA
JMSF052C13+           AATAAGGATAAAAGGGCTTTATGTACCGCATCGCGTTCCACATTTTCTTCAGCAGTAAGA
JMFF024P24+           AATAAGGATAAAAGGGCTTTATGTACCGCATCGCGTTCCACATTTTCTTCAGCAGTAAGA
                      ____________________________________________________________
consensus             AATAAGGATAAAAGGGCTTTATGTACCGCATCGCGTTCCACATTTTCTTCAGCAGTAAGA
 
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JMFS115G05+           AGCTGAGCAAGTATGTCAACAATTTTGGAAAGATGCTCCGGTGTATCCTTGCAGAAAAGA
JMSF052C13+           AGCTGAGCAAGTATGTCAACAATTTTGGAAAGATGCTCCGGTGTATCCTTGCAGAAAAGA
JMFF024P24+           AGCTGAGCAAGTATGTCAACAATTTTGGAAAGATGCTCCGGTGTATCCTTGCAGAAAAGA
                      ____________________________________________________________
consensus             AGCTGAGCAAGTATGTCAACAATTTTGGAAAGATGCTCCGGTGTATCCTTGCAGAAAAGA
 
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JMFS115G05+           GGAAGACCACGAATGGCTTGAACTCGGATCCCAAGCTCCTCTGCTTCACACAAATCGAGG
JMSF052C13+           GGAAGACCACGAATGGCTTGAACTCGGATCCCAAGCTCCTCTGCTTCACACAAATCGAGG
JMFF024P24+           GGAAGACCACGAATGGCTTGAACTCGGATCCCAAGCTCCTCTGCTTCACACAAATCGAGG
                      ____________________________________________________________
consensus             GGAAGACCACGAATGGCTTGAACTCGGATCCCAAGCTCCTCTGCTTCACACAAATCGAGG
 
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JMFS115G05+           TGTGCATCTACCGCGCTGACAGACAAGCTAGGGAAGTACTTGAAGAACCTGGGAATGAGC
JMSF052C13+           TGTGCATCTACCGCGCTGACAGACAAGCTAGGGAAGTACTTGAAGAACCTGGGAATGAGC
JMFF024P24+           TGTGCATCTACCGCGCTGACAGACAAGCTAGGGAAGTACTTGAAGAACCTGGGAATGAGC
                      ____________________________________________________________
consensus             TGTGCATCTACCGCGCTGACAGACAAGCTAGGGAAGTACTTGAAGAACCTGGGAATGAGC
 
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JMFS115G05+           TGCGCAGCCAATTGCCTGGCTTTGATGCTGTTGCTTTTAGCTGCCGTGAGTATACTCTCG
JMSF052C13+           TGCGCAGCCAATTGCCTGGCTTTGATGCTGTTGCTTTTAGCTGCCGTGAGTATACTCTCG
JMFF024P24+           TGCGCAGCCAATTGCCTGGCTTTGATGCTGTTGCTTTTAGCTGCCGTGAGTATACTCTCG
                      ____________________________________________________________
consensus             TGCGCAGCCAATTGCCTGGCTTTGATGCTGTTGCTTTTAGCTGCCGTGAGTATACTCTCG
 
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JMFS115G05+           TAGTCCTCCACTTGCTGGGACTTGTCTTTGGCCTCGTTGAGGCGCTCGCCATA       
JMSF052C13+           TAGTCCTCCACTTGCTGGGACTTGTCTTTGGCCTCGTTGAGGCGCTCGCCATACTCGTAG
JMFF024P24+           TAGTCCTCCACTTGCTGGGACTTGTCTTTGGCCTCGTTGAGGCGCTCGCCATACTCGTAG
                      ____________________________________________________________
consensus             TAGTCCTCCACTTGCTGGGACTTGTCTTTGGCCTCGTTGAGGCGCTCGCCATACTCGTAG
 
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JMSF052C13+           AGCTTCTCGATGTCATTGGCCTCGTCCGATGCGTCTGCCATTTTTGCTCGCTCAAGCAGA
JMFF024P24+           AGCTTCTCGATGTCATTGGCCTCGTCCGATGCGTCTGCCATTTTTGCTCGCTCAAGCAGA
                      ____________________________________________________________
consensus             AGCTTCTCGATGTCATTGGCCTCGTCCGATGCGTCTGCCATTTTTGCTCGCTCAAGCAGA
 
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JMSF052C13+           CTACTC                                                      
JMFF024P24+           CTACTCACTGCTGCTTCTTCTGTAGTGGGAGATTGGTAATTTACGCAATCAATTCAAGTC
                      ____________________________________________________________
consensus             CTACTCACTGCTGCTTCTTCTGTAGTGGGAGATTGGTAATTTACGCAATCAATTCAAGTC