Contig 001683:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024E17Sequence543001683 (3)771004024 (2)ref|XP_004486986.1|6e-58PREDICTED: pumilio homolog 3-like [Cicer arietinum]
JMFF040L03Sequence531001683 (3)ref|XP_011089489.1|7e-59PREDICTED: pumilio homolog 2-like [Sesamum indicum]768004024 (2)gb|KDO72812.1|1e-96hypothetical protein CISIN_1g041401mg [Citrus sinensis]
JMFS157A02Sequence464001683 (3)

Alignment

This contig is upended


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JMFF040L03+                       GGCACCATCATTCTTGTTTACTTTCCTCCTATCCCCTATTGCAGAGTT
                      ____________________________________________________________
consensus                         GGCACCATCATTCTTGTTTACTTTCCTCCTATCCCCTATTGCAGAGTT
 
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JMFF040L03+           CCCTCCTTGTAAGCGCTGTGCAAACCTCCAATCCTCTTTGGACATCAGAGGAGGAGGCAA
                      ____________________________________________________________
consensus             CCCTCCTTGTAAGCGCTGTGCAAACCTCCAATCCTCTTTGGACATCAGAGGAGGAGGCAA
 
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JMFF040L03+           CCTAGGGTTCAGATTCACATTAGCATAATAGTAAGACAAGTAAGCAGGGTCTGACCTAAG
                      ____________________________________________________________
consensus             CCTAGGGTTCAGATTCACATTAGCATAATAGTAAGACAAGTAAGCAGGGTCTGACCTAAG
 
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JMFF040L03+           CTCCTCTTCTGATATGAAACCATTCCCATTTTTGTTCCGCGCAAATTCCTGAATGGTGGA
                      ____________________________________________________________
consensus             CTCCTCTTCTGATATGAAACCATTCCCATTTTTGTTCCGCGCAAATTCCTGAATGGTGGA
 
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JMFF040L03+           GCTCCCTCCAACGCCACTGCTACCACCTCCAGCACCATGTTTAAACAAACCACCAACTGC
                      ____________________________________________________________
consensus             GCTCCCTCCAACGCCACTGCTACCACCTCCAGCACCATGTTTAAACAAACCACCAACTGC
 
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JMFF040L03+           AGTAAAAGAACCCTCCACAGTAGGAGGAGCTGAGCCACTTCTATATAAATTAAGTTCCTT
                      ____________________________________________________________
consensus             AGTAAAAGAACCCTCCACAGTAGGAGGAGCTGAGCCACTTCTATATAAATTAAGTTCCTT
 
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JMFF040L03+           TTCAAGATCATCAGCCTCTTGACGACGATGTTCAGAAAGTAAAAGCCCTATCTCCTTCTC
JMFF024E17+                                                                    CTC
                      ____________________________________________________________
consensus             TTCAAGATCATCAGCCTCTTGACGACGATGTTCAGAAAGTAAAAGCCCTATCTCCTTCTC
 
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JMFF040L03+           AAAATCATCTCCAAACGAGTTTTCATTGTTTCCCATCATTGGCCTCCTACTGAATTCAGA
JMFS157A02+                                                             TGAATTCAGA
JMFF024E17+           AAAATCATCTCCAAACGAGTTTTCATTGTTTCCCATCATTGGCCTCCTACTGAATTCAGA
                      ____________________________________________________________
consensus             AAAATCATCTCCAAACGAGTTTTCATTGTTTCCCATCATTGGCCTCCTACTGAATTCAGA
 
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JMFF040L03+           TAACATATTCACAAGCTCAGCAAATTCACCAATTACTCAAAATCCCACAGCCAACACCAC
JMFS157A02+           TAACATATTCACAAGCTCAGCAAATTCACCAATTACTCAAAATCCCACAGCCAACACCAC
JMFF024E17+           TAACATATTCACAAGCTCAGCAAATTCACCAATTACTCAAAATCCCACAGCCAACACCAC
                      ____________________________________________________________
consensus             TAACATATTCACAAGCTCAGCAAATTCACCAATTACTCAAAATCCCACAGCCAACACCAC
 
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JMFF040L03+           TAA                                                         
JMFS157A02+           TAACCCTAAAAACGACAGAAAAGGGGCTATGAAACCAACAACTCTGTAATCTGAACCCTA
JMFF024E17+           TAACCCTAAAAACGACAGAAAAGGGGCTATGAAACCAACAACTCTGTAATCTGAACCCTA
                      ____________________________________________________________
consensus             TAACCCTAAAAACGACAGAAAAGGGGCTATGAAACCAACAACTCTGTAATCTGAACCCTA
 
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JMFS157A02+           AAATAATCAAGACTCACATGTAAAAACCTAAAAATCAGGACTTTCAGCTCATAAAATCCA
JMFF024E17+           AAATAATCAAGACTCACATGTAAAAACCTAAAAATCAGGACTTTCAGCTCATAAAATCCA
                      ____________________________________________________________
consensus             AAATAATCAAGACTCACATGTAAAAACCTAAAAATCAGGACTTTCAGCTCATAAAATCCA
 
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JMFS157A02+           ATCTTCGATTATACAAACTTTAATATATGTTGGTTTTCTAAGTAAAAACTATGAACCCTC
JMFF024E17+           ATCTTCGATTATACAAACTTTAATATATGTTGGTTTTCTAAGTAAAAATTATGAACCCTC
                      ____________________________________________________________
consensus             ATCTTCGATTATACAAACTTTAATATATGTTGGTTTTCTAAGTAAAAATTATGAACCCTC
 
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JMFS157A02+           TGTGATCAAACATCTAAGAAGCATAAAAATCACTTATTTTGCTTAAATGGCTGCAAATGG
JMFF024E17+           TGTGATCAAACATCTAAGAAGCATAAAAATCACTTATTTTGCTTAAATTACTGCAAATGG
                      ____________________________________________________________
consensus             TGTGATCAAACATCTAAGAAGCATAAAAATCACTTATTTTGCTTAAATTGCTGCAAATGG
 
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JMFS157A02+           TTGAACAATGCAAAAACAATGGAATTTCAAAAAAGAGGCTTGATAAACCAGAGAGCGCAG
JMFF024E17+           TTGAACAATGCAAAAACAATGGAATTTCAAAAAAGAGGCTTGATAAACCAGAGAGCGCAG
                      ____________________________________________________________
consensus             TTGAACAATGCAAAAACAATGGAATTTCAAAAAAGAGGCTTGATAAACCAGAGAGCGCAG
 
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JMFS157A02+           AACTGATACAGAGTGGGACCCGCTATGAAGGGTGTAGTAGGGTTAAGTTGAGAGAAAGAT
JMFF024E17+           AACTGATACAGAGTGGGAACCGCTCTGAAGGGTGTAGTAGGGTTAAGTTGAGAGAAAGAT
                      ____________________________________________________________
consensus             AACTGATACAGAGTGGGACCCGCTCTGAAGGGTGTAGTAGGGTTAAGTTGAGAGAAAGAT
 
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JMFS157A02+           CAAGCCGGCGGCGATTGT                                          
JMFF024E17+           CAAGCCGGCGGCGATTGTTCTTGCGGAGAACCCCCTAGGGTTTTGTTTTTCAACTACTTT
                      ____________________________________________________________
consensus             CAAGCCGGCGGCGATTGTTCTTGCGGAGAACCCCCTAGGGTTTTGTTTTTCAACTACTTT