Contig 001682:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013J14Sequence574001682 (2)ref|XP_009593142.1|3e-28PREDICTED: putative transferase CAF17 homolog, mitochondrial [Nicotiana tomento738013660 (2)emb|CBI22149.3|4e-80unnamed protein product [Vitis vinifera]
JMFF024C14Sequence433001682 (2)ref|XP_009593142.1|2e-06PREDICTED: putative transferase CAF17 homolog, mitochondrial [Nicotiana tomento596013660 (2)emb|CBI22149.3|5e-53unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFF013J14+                                     AGTCAAGAGCGCAGCGTAGACAGGAAACGGCGTC
                      ____________________________________________________________
consensus                                       AGTCAAGAGCGCAGCGTAGACAGGAAACGGCGTC
 
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JMFF013J14+           GTAAAGGGCACGTTTGAAGTGGCCAAGCTGGTCTTGTCCTTATCCTGCTCCGGAGGCTCC
                      ____________________________________________________________
consensus             GTAAAGGGCACGTTTGAAGTGGCCAAGCTGGTCTTGTCCTTATCCTGCTCCGGAGGCTCC
 
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JMFF013J14+           GCAAGGCTGCGCATATCGTTGGTGAGCAGGCCCTGAAGGAACTTCACGGTGTCGGCTCCT
JMFF024C14+                                                          GGTGTCGGCTCCT
                      ____________________________________________________________
consensus             GCAAGGCTGCGCATATCGTTGGTGAGCAGGCCCTGAAGGAACTTCACGGTGTCGGCTCCT
 
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JMFF013J14+           CTGAACCGGATCACGGACCGGGTCTTTAGGAGCGAGGCCATGGTGGCCGCATTCGCCAGC
JMFF024C14+           CTGAACCGGATCACGGACCGGGTCTTTAGGAGCGAGGCCATGGTGGCCGCATTCGCCAGC
                      ____________________________________________________________
consensus             CTGAACCGGATCACGGACCGGGTCTTTAGGAGCGAGGCCATGGTGGCCGCATTCGCCAGC
 
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JMFF013J14+           TGGGACGCCTCAGACTCAGAGGAGAAGTATCTGAAGTGGCCGGGTTTTAGGAAATGGAGT
JMFF024C14+           TGGGACGCCTCAGACTCAGAGGAGAAGTATCTGAAGTGGCCGGGTTTTAGGAAATGGAGT
                      ____________________________________________________________
consensus             TGGGACGCCTCAGACTCAGAGGAGAAGTATCTGAAGTGGCCGGGTTTTAGGAAATGGAGT
 
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JMFF013J14+           GACGCTCGGCGGAAACGCTGCATTGCCGGAAAAAATGTTTTAGATAGCGACGGTCGAAGT
JMFF024C14+           GACGCTCGGCGGAAACGCTGCATTGCCGGAAAAAATGTTTTAGATAGCGACGGTCGAAGT
                      ____________________________________________________________
consensus             GACGCTCGGCGGAAACGCTGCATTGCCGGAAAAAATGTTTTAGATAGCGACGGTCGAAGT
 
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JMFF013J14+           TGGCGGCGTGCAGCGGCGATTACTAAGCTCTGGAAATGGCGATCATGACAGATGGAGGGG
JMFF024C14+           TGGCGGCGTGCAGCGGCGATTACTAAGCTCTGGAAATGGCGATCATGACAGATGGAGGGG
                      ____________________________________________________________
consensus             TGGCGGCGTGCAGCGGCGATTACTAAGCTCTGGAAATGGCGATCATGACAGATGGAGGGG
 
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JMFF013J14+           ATAAGTATACGGACACGTGGGATTCGGAGGTTGTAATGGCGCGACACGTAGTGCTTGGTG
JMFF024C14+           ATAAGTATACGGACACGTGGGATTCGGAGGTTGTAATGGCGCGACACGTAGTGCTTGGTG
                      ____________________________________________________________
consensus             ATAAGTATACGGACACGTGGGATTCGGAGGTTGTAATGGCGCGACACGTAGTGCTTGGTG
 
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JMFF013J14+           GGAGATGGTAGTGTGGTGCTGTTGATCGATAGATGTTTGATGAAATTTCTGAAAGAAACT
JMFF024C14+           GGAGATGGTAGTGTGGTGCTGTTGATCGATAGATGTTTGATGAAATTTCTGAAAGAAACT
                      ____________________________________________________________
consensus             GGAGATGGTAGTGTGGTGCTGTTGATCGATAGATGTTTGATGAAATTTCTGAAAGAAACT
 
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JMFF013J14+           TCGAATAGCGCAGTTGATTTGCTTGCAGCAAACCGATGGACCAAACTCTGCCCCGGTTCT
JMFF024C14+           TCGAATAGCGCAGTTGATTTGCTTGCAGCAAACCGATGGACCAAACTCTGCCCCGGTTCT
                      ____________________________________________________________
consensus             TCGAATAGCGCAGTTGATTTGCTTGCAGCAAACCGATGGACCAAACTCTGCCCCGGTTCT