Contig 001681:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023O14Sequence352001681 (3)ref|XP_011027212.1|9e-36PREDICTED: AP3-complex subunit beta-A isoform X1 [Populus euphratica]731006955 (15)sp|Q07796.2|SODC_IPOBA1e-94RecName: Full=Superoxide dismutase [Ipomoea batatas] emb|CAA51654.1| superoxide
JMFF023P14Sequence532001681 (3)gb|KJB80529.1|2e-73hypothetical protein B456_013G102200 [Gossypium raimondii]617016970ref|XP_009624439.1|5e-57PREDICTED: AP3-complex subunit beta-A [Nicotiana tomentosiformis]
JMFS093G07Sequence617001681 (3)ref|XP_008343581.1|2e-111PREDICTED: AP3-complex subunit beta-A-like [Malus domestica]

Alignment

This contig is upended


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JMFS093G07+               TGCAGGAGAACTATCATTCAGCAGTATACCCACAATCTCTTCAATTGCATTTACAT
                      ____________________________________________________________
consensus                 TGCAGGAGAACTATCATTCAGCAGTATACCCACAATCTCTTCAATTGCATTTACAT
 
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JMFS093G07+           TTTCTTCTAACCGCAAATCATGCAACTTTGGGAGTGCATTTGCAGCACATTTTCTAACAT
                      ____________________________________________________________
consensus             TTTCTTCTAACCGCAAATCATGCAACTTTGGGAGTGCATTTGCAGCACATTTTCTAACAT
 
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JMFS093G07+           ATACTGATGGATCTCTAGCACACTTCCCTATTGCCACCAAAACAAGTGGTGCAATCACAT
                      ____________________________________________________________
consensus             ATACTGATGGATCTCTAGCACACTTCCCTATTGCCACCAAAACAAGTGGTGCAATCACAT
 
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JMFS093G07+           GTAAACGGATTCCTGCCATTGTACGGAGTGCCCATGCCCTTACCAATGGGTTTTGATCCC
JMFF023P14+                   ATTCCTGCCATTGTACGGAGTGCCCATGCCCTTACCAATGGGTTTTGATCCC
                      ____________________________________________________________
consensus             GTAAACGGATTCCTGCCATTGTACGGAGTGCCCATGCCCTTACCAATGGGTTTTGATCCC
 
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JMFS093G07+           CCAAATCCTTCTGGAAACAGTTTATTGAGAGCAATGCCTCATTTGGCCGCTTCTCAGCAT
JMFF023P14+           CCAAATCCTTCTGGAAACAGTTTATTGAGAGCAATGCCTCATTTGGCCGCTTCTCAGCAT
                      ____________________________________________________________
consensus             CCAAATCCTTCTGGAAACAGTTTATTGAGAGCAATGCCTCATTTGGCCGCTTCTCAGCAT
 
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JMFS093G07+           AATGCAGTAGATACAAGTAAACCAGCTTCTTGACTTCCAATGATTGTGAAGCCACATTTT
JMFF023P14+           AATGCAGTAGATACAAGTAAACCAGCTTCTTGACTTCCAATGATTGTGAAGCCACATTTT
                      ____________________________________________________________
consensus             AATGCAGTAGATACAAGTAAACCAGCTTCTTGACTTCCAATGATTGTGAAGCCACATTTT
 
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JMFS093G07+           TCACCACCTGGGGGAAGAAATTTGAGACATCAAAACCTTGAGCAATGAGAGCAAGCAATC
JMFF023P14+           TCACCACCTGGGGGAAGAAATTTGAGACATCAAAACCTTGAGCAATGAGAGCAAGCAATC
JMFF023O14+                   TGGGGGAAGAAATTTGAGACATCAAAACCTTGAGCAATGAGAGCAAGCAATC
                      ____________________________________________________________
consensus             TCACCACCTGGGGGAAGAAATTTGAGACATCAAAACCTTGAGCAATGAGAGCAAGCAATC
 
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JMFS093G07+           TCTTGAGAGCTTCGCACTTCTCGGAGTCGAACTTGCTGTCGAGGAGCGGGGCAATGTTGA
JMFF023P14+           TCTTGAGAGCTTCGCACTTCTCGGAGTCGAACTTGCTGTCGAGGAGCGGGGCAATGTTGA
JMFF023O14+           TCTTGAGAGCTTCGCACTTCTCGGAGTCGAACTTGCTGTCGAGGAGCGGGGCAATGTTGA
                      ____________________________________________________________
consensus             TCTTGAGAGCTTCGCACTTCTCGGAGTCGAACTTGCTGTCGAGGAGCGGGGCAATGTTGA
 
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JMFS093G07+           CGTCTTCAGGATCGTCGTAGAGGTGAGCATCCGTGCCGATCCGGAACGCCAACGTTGAGG
JMFF023P14+           CGTCTTCAGGATCGTCGTAGAGGTGAGCATCCGTGCCGATCCGGAACGCCAACGTTGAGG
JMFF023O14+           CGTCTTCAGGATCGTCGTAGAGGTGAGCATCCGTGCCGATCCGGAACGCCAACGTTGAGG
                      ____________________________________________________________
consensus             CGTCTTCAGGATCGTCGTAGAGGTGAGCATCCGTGCCGATCCGGAACGCCAACGTTGAGG
 
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JMFS093G07+           CTTTGCTCAGTGAGTCCGCCGTCGCTCCGAACTGTGAGAACATGTTCGATGCTTTCAAAT
JMFF023P14+           CTTTGCTCAGTGAGTCCGCCGTCGCTCCGAACTGTGAGAACATGTTCGATGCTTTCAAAT
JMFF023O14+           CTTTGCTCAGTGAGTCCGCCGTCGCTCCGAACTGTGAGAACATGTTCGATGCTTTCAAAT
                      ____________________________________________________________
consensus             CTTTGCTCAGTGAGTCCGCCGTCGCTCCGAACTGTGAGAACATGTTCGATGCTTTCAAAT
 
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JMFS093G07+           TCCCGGCAATTGCAGTTCAGA                                       
JMFF023P14+           TCCCGGCAATTGCAGTTCAGACGTCGGGGATCCACTTCTCTGAAGATGAATAGATGCCGA
JMFF023O14+           TCCCGGCAATTGCAGTTCAGACGTCGGGGATCCACTTCTCTGAAGATGAATAGATGCCGA
                      ____________________________________________________________
consensus             TCCCGGCAATTGCAGTTCAGACGTCGGGGATCCACTTCTCTGAAGATGAATAGATGCCGA
 
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JMFF023P14+           CCCACCGGAAACCGGACTCAGCAGGCGTTAGCTGCCCGAAGGTGTTACCTTTTTTTCTTT
JMFF023O14+           CCCACCGGAAACCGGACTCAGCAGGCGTTAGCTGCCCGAAGGTGTTACCTTTTTTTCTTT
                      ____________________________________________________________
consensus             CCCACCGGAAACCGGACTCAGCAGGCGTTAGCTGCCCGAAGGTGTTACCTTTTTTTCTTT