| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010M11 | Sequence | 584 | 001679 (7) | ref|XP_007146473.1| | 3e-60 | hypothetical protein PHAVU_006G043400g [Phaseolus vulgaris] gb|ESW18467.1| hypot | |||||
| JMFF014P08 | Sequence | 586 | 001679 (7) | ref|XP_007146473.1| | 3e-61 | hypothetical protein PHAVU_006G043400g [Phaseolus vulgaris] gb|ESW18467.1| hypot | |||||
| JMFF015G14 | Sequence | 189 | 001679 (7) | ||||||||
| JMFF023K08 | Sequence | 345 | 001679 (7) | ref|XP_009762490.1| | 2e-16 | PREDICTED: ribonuclease UK114 [Nicotiana sylvestris] gb|AIE54286.1| constitutive | |||||
| JMFF030O02 | Sequence | 385 | 001679 (7) | emb|CDP05756.1| | 2e-21 | unnamed protein product [Coffea canephora] | 318 | 001679 (7) | ref|XP_007146473.1| | 1e-24 | hypothetical protein PHAVU_006G043400g [Phaseolus vulgaris] gb|ESW18467.1| hypot |
| JMFN001H01 | Sequence | 463 | 001679 (7) | ref|XP_009762490.1| | 2e-54 | PREDICTED: ribonuclease UK114 [Nicotiana sylvestris] gb|AIE54286.1| constitutive | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF030O02- CNAATGCTTCAAAANTACTACATTCTTAAGCAGCCACCAGTCTTCAACAAGAA
____________________________________________________________
consensus CNAATGCTTCAAAANTACTACATTCTTAAGCAGCCACCAGTCTTCAACAAGAA
. : . : . : . : . : . :
rJMFF030O02- GGTCTAGACATGTAAGCTTGGCATTATTAAATATAACAGCCCATTCCCNACAAGCTGGAT
____________________________________________________________
consensus GGTCTAGACATGTAAGCTTGGCATTATTAAATATAACAGCCCATTCCCNACAAGCTGGAT
. : . : . : . : . : . :
rJMFF015G14- GACTTTACAATGCTGCTATGCNTTCN
rJMFF030O02- TATAGCCAAGACTTGGCATACCTGTGGGCATTGGGACTTTACAATGCTGCTATGCATTCA
____________________________________________________________
consensus TATAGCCAAGACTTGGCATACCTGTGGGCATTGGGACTTTACAATGCTGCTATGCATTCA
. : . : . : . : . : . :
rJMFF015G14- NCTTCTATCTTTGCATCCTTGGGTAATGCTGCCACCTGATAAGT
rJMFF030O02- ACTTCTATCTTTGCATCCATGGGTAATGCTGCCACCTGATAAGTTGCACGGGCTGGTGCT
JMFF014P08+ CATCCATGGGTAATGCTGCCACCTGATAAGTTGCACGGGCTGGTGCT
JMFF010M11+ TGGGTAATGCTGCCACCTGATAAGTTGCACGGGCTGGTGCT
____________________________________________________________
consensus ACTTCTATCTTTGCATCCATGGGTAATGCTGCCACCTGATAAGTTGCACGGGCTGGTGCT
. : . : . : . : . : . :
rJMFF030O02- GGTGATGANAAATATTTANCATATATCTCATTCACTTTCTTGAAGTCCTTCAAATCAGCT
JMFF014P08+ GGTGATGAGAAATATTTAGCATATATCTCATTCACTTTCTTGAAGTCCTTCAAATCAGCT
JMFF010M11+ GGTGATGAGAAATATTTAGCATATATCTCATTCACTTTCTTGAAGTCCTTCAAATCAGCT
____________________________________________________________
consensus GGTGATGAGAAATATTTAGCATATATCTCATTCACTTTCTTGAAGTCCTTCAAATCAGCT
. : . : . : . : . : . :
rJMFF030O02- AACAAGATTGTAGTCTTAACAACAC
JMFF014P08+ AACAAGATTGTAGTCTTAACAACACTGCTGTAGTTAGCACCACCTGCTTTGAGTATCTCC
JMFN001H01+ GTAGTCTTAACAACACTGCTGTAGTTAGCACCACCTGCTTTGAGTATCTCC
JMFF010M11+ AACAAGATTGTAGTCTTAACAACACTGCTGTAGTTAGCACCACCTGCTTTGAGTATCTCC
____________________________________________________________
consensus AACAAGATTGTAGTCTTAACAACACTGCTGTAGTTAGCACCACCTGCTTTGAGTATCTCC
. : . : . : . : . : . :
JMFF014P08+ CCCATGTTCTTTAGAACCTGCTCTGTTTGGTCCTCCACATTATCCGACAAAAACTTCCCA
JMFN001H01+ CCCATGTTCTTTAGAACCTGCTCTGTTTGGTCCTCCACATTATCCGACAAAAACTTCCCA
JMFF030O02+ CCACATTATCCGACAAAAACTTCCCA
JMFF010M11+ CCCATGTTCTTTAGAACCTGCTCTGTTTGGTCCTCCACATTATCCGACAAAAACTTCCCA
____________________________________________________________
consensus CCCATGTTCTTTAGAACCTGCTCTGTTTGGTCCTCCACATTATCCGACAAAAACTTCCCA
. : . : . : . : . : . :
JMFF014P08+ GTCTCTGGAACAAGACCAAGAACTCCAGATACAAAAAGAAGATTATTTGCTTTGATGGCT
JMFN001H01+ GTCTCTGGAACAAGACCAAGAACTCCAGATACAAAAAGAAGATTATTTGCTTTGATGGCT
JMFF030O02+ GTCTCTGGAACAAGACCAAGAACTCCAGATACAAAAAGAAGATTATTTGCTTTGATGGCT
JMFF010M11+ GTCTCTGGAACAAGACCAAGAACTCCAGATACAAAAAGAAGATTATTTGCTTTGATGGCT
JMFF023K08+ ACCAAGAACTCCAGATACAAAAAGAAGATTATTTGCTTTGATGGCT
____________________________________________________________
consensus GTCTCTGGAACAAGACCAAGAACTCCAGATACAAAAAGAAGATTATTTGCTTTGATGGCT
. : . : . : . : . : . :
JMFF014P08+ TGAGAGTAAGGCCCCAGTG-AGCTGGAGCCTTTTCAGTATGAACAGCCTCCTTTCCACTT
JMFN001H01+ TGAGAGTAAGGCCCCAGTGCAGCTGGAGCCTTTTCAGTATGAACAGCCTCCTTTCCACTT
JMFF030O02+ TGAGAGTAAGGCCCCAGTG-AGCTGGAGCCTTTTCAGTATGAACAGCCTCCTTTCCACTT
JMFF010M11+ TGAGAGTAAGGCCCCAGTG-AGCTGGAGCCTTTTCAGTATGAACAGCCTCCTTTCCACTT
JMFF023K08+ TGAGAGTAAGGCCCCAGTG-AGCTGGAGCCTTTTCAGTATGAACAGCCTCCTTTCCACTT
____________________________________________________________
consensus TGAGAGTAAGGCCCCAGTG-AGCTGGAGCCTTTTCAGTATGAACAGCCTCCTTTCCACTT
. : . : . : . : . : . :
JMFF014P08+ GTATCAGTAGAAGCGCTTAAAGAAGCGAAAGGCTTTGACGAGCGGCGAGAGGTCGCAGGC
JMFN001H01+ GTATCAGTAGAAGCGCTTAAAGAAGCGAAAGGCTTTGACGAGCGGCGAGAGGTCGCAGGC
JMFF030O02+ GTATCAGTAGAAGCGCTTAAAGAAGCGAAAGGCTTTGACGAGCGGCGAGAGGTCGCAGGC
JMFF010M11+ GTATCAGTAGAAGCGCTTAAAGAAGCGAAAGGCTTTGACGAGCGGCGAGAGGTCGCAGGC
JMFF023K08+ GTATCAGTAGAAGCGCTTAAAGAAGCGAAAGGCTTTGACGAGCGGCGAGAGGTCGCAGGC
____________________________________________________________
consensus GTATCAGTAGAAGCGCTTAAAGAAGCGAAAGGCTTTGACGAGCGGCGAGAGGTCGCAGGC
. : . : . : . : . : . :
JMFF014P08+ AGCAGTGATACACGGCCTGCGCGGGCAAAGGCTGAGGGAGCAGGGTTGCGAAATGCGCAG
JMFN001H01+ AGCAGTGATACACGGCCTGCGCGGGCAAAGGCTGAGGGAGCAGGGTTGCGAAATGCGCAG
JMFF030O02+ AGCAGTGATACACGGCCTGCGCGGGCAAAGGCTGAGGGAGCAGGGTTGCGAAATGCGCAG
JMFF010M11+ AGCAGTGATACACGGCCTGCGCGGGCAAAGGCTGAGGGAGCAGGGTTGCGAAATGCGCAG
JMFF023K08+ AGCAGTGATACACGGCCTGCGCGGGCAAAGGCTGAGGGAGCAGGGTTGCGAAATGCGCAG
____________________________________________________________
consensus AGCAGTGATACACGGCCTGCGCGGGCAAAGGCTGAGGGAGCAGGGTTGCGAAATGCGCAG
. : . : . : . : . : . :
JMFF014P08+ ACGTCGGAGGGGCGCAAATGGAGAGTCTTTGCTGCGGCGGACCAGGAGGCCATTGATTTC
JMFN001H01+ ACGTCGGAGGGGCGCAAATGGAGAGTCTTTGCTGCGGCGGACCAGGAGGCCATTGATTTC
JMFF030O02+ ACGTCGGAGGGGCGCAAATGGAGAGTCTTTGCTGCGGCGGACCAGGAGGCCATTGATTTC
JMFF010M11+ ACGTCGGAGGGGCGCAAATGGAGAGTCTTTGCTGCGGCGGACCAGGAGGCCATTGATTTC
JMFF023K08+ ACGTCGGAGGGGCGCAAATGGAGAGTCTTTGCTGCGGCGGACCAGGAGGCCATTGATTTC
____________________________________________________________
consensus ACGTCGGAGGGGCGCAAATGGAGAGTCTTTGCTGCGGCGGACCAGGAGGCCATTGATTTC
. : . : . : . : . : . :
JMFF014P08+ TCCGCTTCACTCACCAAATCCCTCAACTACTGTGACGCTCAACTTCGACTGCGCTTTGCT
JMFN001H01+ TCCGCTTCACTCACCAAATCCCTCAACTACTGT
JMFF030O02+ TCCGCTTCACTCACCAAATCCCTCAACTACTGTGACGCTCAACTTCGACTGCGCTTTGCT
JMFF010M11+ TCCGCTTCACTCACCAAATCCCTCAACTACTGTGACGCTCAACTTCGACTGCGCTTTGCT
JMFF023K08+ TCCGCTTCACTCACCAAATCCCTCAACTACTGTGACGCTCAACTTCGACTGCGCTTTGCT
____________________________________________________________
consensus TCCGCTTCACTCACCAAATCCCTCAACTACTGTGACGCTCAACTTCGACTGCGCTTTGCT