Contig 001675:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023E05Sequence504001675 (13)ref|XP_010110991.1|2e-8140S ribosomal protein S14-3 [Morus notabilis] gb|EXC29377.1| 40S ribosomal prote680001675 (13)ref|XP_006430156.1|2e-80hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P
JMFF023E08Sequence516001675 (13)ref|XP_006430156.1|2e-75hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P697001675 (13)ref|XP_006430156.1|3e-80hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P
JMFF025P10Sequence504001675 (13)ref|XP_010110991.1|2e-8240S ribosomal protein S14-3 [Morus notabilis] gb|EXC29377.1| 40S ribosomal prote682001675 (13)ref|XP_006430156.1|2e-80hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P
JMFN005B01Sequence620001675 (13)ref|XP_006430156.1|8e-81hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P
JMFN012J15Sequence627001675 (13)ref|XP_006430156.1|1e-80hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P
JMFN030L13Sequence640001675 (13)ref|XP_006430156.1|1e-80hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P
JMFN044F23Sequence531001675 (13)ref|XP_006430156.1|1e-81hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P
JMFN044K16Sequence636001675 (13)ref|XP_006430156.1|3e-81hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P
JMSF015G15Sequence500001675 (13)ref|XP_010110991.1|2e-8240S ribosomal protein S14-3 [Morus notabilis] gb|EXC29377.1| 40S ribosomal prote669001675 (13)ref|XP_006430156.1|1e-80hypothetical protein CICLE_v10013022mg [Citrus clementina] ref|XP_006481743.1| P

Alignment

This contig is upended


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rJMSF015G15-                                                                 TCTTA
rJMFF023E05-                                                          GAGGTATTCTTA
                      ____________________________________________________________
consensus                                                             GAGGTATTCTTA
 
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rJMSF015G15-          ATTTAGCAAAATCAAACAGTTCCACCATTCCACAAGCTACAGTATCTGAAAAATATAAAA
JMFN030L13+                      TCAAACAGTTCCACCATTCCACAAGCTACAGTATCTGAAAAATATAAAA
JMFN044K16+                 CAAAATCAAACAGTTCCACCATTCCACAAGCTACAGTATCTGAAAAATATAAAA
JMFN012J15+                                CCACCATTCCACAAGCTACAGTATCTGAAAAATATAAAA
JMFN005B01+                                           CAAGCTACAGTATCTGAAAAATATAAAA
rJMFF023E05-          ATTTAGCAAAATCAAACAGTTCCACCATTCCACAAGCTACAGTATCTGAAAAATATAAAA
                      ____________________________________________________________
consensus             ATTTAGCAAAATCAAACAGTTCCACCATTCCACAAGCTACAGTATCTGAAAAATATAAAA
 
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rJMSF015G15-          ATTCGCAATCAAATCTCAACTGTTGTCTAGATATTCAAAGCATCCTTGATTGTAGATTCC
JMFN030L13+           ATTCGCAATCAAATCTCAACTGTTGTCTAGATATTCAAAGCATCCTTGATTGTAGATTCC
JMFN044K16+           ATTCGCAATCAAATCTCAACTGTTGTCTAGATATTCAAAGCATCCTTGATTGTAGATTCC
JMFN012J15+           ATTCGCAATCAAATCTCAACTGTTGTCTAGATATTCAAAGCATCCTTGATTGTAGATTCC
JMFN005B01+           ATTCGCAATCAAATCTCAACTGTTGTCTAGATATTCAAAGCATCCTTGATTGTAGATTCC
JMFN044F23+                                                              GTAGATTCC
rJMFF023E05-          ATTCGCAATCAAATCTCAACTGTTGTCTAGATATTCAAAGCATCCTTGATTGTAGATTCC
                      ____________________________________________________________
consensus             ATTCGCAATCAAATCTCAACTGTTGTCTAGATATTCAAAGCATCCTTGATTGTAGATTCC
 
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rJMSF015G15-          ATCCACATGAATGAGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTCTACCACCCTTTC
JMFN030L13+           ATCCACATGAATGAGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTCTACCACCCTTTC
rJMFF023E08-                       AGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTCTACCACCCTTTC
JMFN044K16+           ATCCACATGAATGAGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTCTACCACCCTTTC
JMFN012J15+           ATCCACATGAATGAGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTCTACCACCCTTTC
JMFN005B01+           ATCCACATGAATGAGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTCTACCACCCTTTC
rJMFF025P10-                       AGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTCTACCACCCTTTC
JMFN044F23+           ATCCACATGAATGAGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTATACCACCCTTTC
rJMFF023E05-          ATCCACATGAATGAGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTCTACCACCCTTTC
JMFF023E05+                                                       CTTCTACCACCCTTTN
JMSF015G15+                                                       CTTCTACCACCCTTTC
JMFF025P10+                                                       CTTCTACCACCCTTTC
                      ____________________________________________________________
consensus             ATCCACATGAATGAGTATAAAGAAGGAATCACAGCCTCCTTCCCCTTCTACCACCCTTTC
 
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rJMSF015G15-          TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
JMFN030L13+           TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
rJMFF023E08-          TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
JMFN044K16+           TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
JMFN012J15+           TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
JMFN005B01+           TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
rJMFF025P10-          TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
JMFN044F23+           TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
rJMFF023E05-          TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
JMFF023E05+           TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
JMSF015G15+           TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
JMFF025P10+           TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
JMFF023E08+                                   GTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
                      ____________________________________________________________
consensus             TACGAGTACTGTCGGTGGGAATTGGTGTGACATCCTCTATGCGGCCAATTTTCATGCCTG
 
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rJMSF015G15-          AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
JMFN030L13+           AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
rJMFF023E08-          AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
JMFN044K16+           AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
JMFN012J15+           AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
JMFN005B01+           AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
rJMFF025P10-          AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
JMFN044F23+           AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
rJMFF023E05-          AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
JMFF023E05+           AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
JMSF015G15+           AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
JMFF025P10+           AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
JMFF023E08+           AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
                      ____________________________________________________________
consensus             AACGAGCAAGGGCTCTCAGAGCAGACTGGGCACCGGGGCCAGGAGTCTTTGTTTTGTTCC
 
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rJMSF015G15-          CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
JMFN030L13+           CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
rJMFF023E08-          CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
JMFN044K16+           CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
JMFN012J15+           CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
JMFN005B01+           CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
rJMFF025P10-          CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
JMFN044F23+           CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
rJMFF023E05-          CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
JMFF023E05+           CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
JMSF015G15+           CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
JMFF025P10+           CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
JMFF023E08+           CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
                      ____________________________________________________________
consensus             CTCCTGTAGCACGAAGTTTGATGTGCAGTGCAGTAATTCCAAGCTCCTTGCATCGCTGAG
 
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rJMSF015G15-          ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
JMFN030L13+           ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
rJMFF023E08-          ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
JMFN044K16+           ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
JMFN012J15+           ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
JMFN005B01+           ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
rJMFF025P10-          ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
JMFN044F23+           ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
rJMFF023E05-          ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
JMFF023E05+           ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
JMSF015G15+           ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
JMFF025P10+           ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
JMFF023E08+           ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
                      ____________________________________________________________
consensus             ACACATCTTGTGCCGCAAGCATAGCAGCATAAGGAGAAGATTCATCTCTGTCAGCCTTGA
 
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rJMSF015G15-          CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
JMFN030L13+           CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
rJMFF023E08-          CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
JMFN044K16+           CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
JMFN012J15+           CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
JMFN005B01+           CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
rJMFF025P10-          CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
JMFN044F23+           CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
rJMFF023E05-          CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
JMFF023E05+           CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
JMSF015G15+           CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
JMFF025P10+           CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
JMFF023E08+           CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
                      ____________________________________________________________
consensus             CCTTCATGCCACCAGTAATACGGACCAGTGTTTCTCTTCCAGACAAATCCGTAACATGAA
 
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rJMSF015G15-          TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
JMFN030L13+           TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
rJMFF023E08-          TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
JMFN044K16+           TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
JMFN012J15+           TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
JMFN005B01+           TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
rJMFF025P10-          TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
JMFN044F23+           TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
rJMFF023E05-          TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
JMFF023E05+           TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
JMSF015G15+           TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
JMFF025P10+           TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
JMFF023E08+           TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
                      ____________________________________________________________
consensus             TGAACGTATCATTGAATGAGGCAAAAATGTGAGCAACACCAAACACCAACTCCCCTTCTC
 
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rJMSF015G15-          TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
JMFN030L13+           TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
rJMFF023E08-          TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
JMFN044K16+           TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
JMFN012J15+           TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
JMFN005B01+           TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
rJMFF025P10-          TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
JMFN044F23+           TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
rJMFF023E05-          TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
JMFF023E05+           TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
JMSF015G15+           TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
JMFF025P10+           TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
JMFF023E08+           TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
                      ____________________________________________________________
consensus             TTATGGCTGGTCCGAGAGTGACATTCTCCTCCTTGGGCTCCCTGGTCTTTCTCCTCGACA
 
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rJMSF015G15-          TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTTGGAAAAACC
JMFN030L13+           TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTT         
rJMFF023E08-          TGGCT                                                       
JMFN044K16+           TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGAC                  
JMFN012J15+           TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAG            
JMFN005B01+           TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTTG        
rJMFF025P10-          TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTTGGAAAAACC
JMFN044F23+           TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGAC                  
rJMFF023E05-          TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTTGGAAAAACC
JMFF023E05+           TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTTGGAAAAACC
JMSF015G15+           TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTTGGAAAAACC
JMFF025P10+           TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTTGGAAAAACC
JMFF023E08+           TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTTGGAAAAACC
                      ____________________________________________________________
consensus             TGGCTATGGCTTTGGGTGATGAAGAAAGAGCTGAGCTGCGACTTAAAGCTTGGAAAAACC
 
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rJMSF015G15-          CT                                                          
rJMFF025P10-          C                                                           
rJMFF023E05-          CTAGAGCT                                                    
JMFF023E05+           CTAGAGCT                                                    
JMSF015G15+           CT                                                          
JMFF025P10+           CTAGAGCT                                                    
JMFF023E08+           CTAGAGCTGATTCCAAGTGACAAGGCTCGGCGTTTATATATCTAGGGTTGTAGAAGATAT
                      ____________________________________________________________
consensus             CTAGAGCTGATTCCAAGTGACAAGGCTCGGCGTTTATATATCTAGGGTTGTAGAAGATAT