Contig 001673:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018L21Sequence559001673 (3)ref|XP_009619672.1|7e-106PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1 [Nicotiana tomen814002572 (3)ref|XP_009774328.1|5e-103PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Nicotiana sylve
JMFF022L17Sequence554001673 (3)ref|XP_009619672.1|1e-104PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1 [Nicotiana tomen789002572 (3)ref|XP_009774328.1|1e-101PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Nicotiana sylve
JMFF034D15Sequence465001673 (3)ref|XP_009619672.1|5e-85PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1 [Nicotiana tomen671002572 (3)ref|XP_009774328.1|1e-83PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Nicotiana sylve

Alignment

This contig is upended


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JMFF018L21+                                                    TGAGCCGCCACTTTCACTA
JMFF022L17+                                                         CGCCACTTTCACTA
                      ____________________________________________________________
consensus                                                      TGAGCCGCCACTTTCACTA
 
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JMFF018L21+           GTATGTCTTCAATATACTTGTACGCTTCGAAAGAACCGCCAGGCATTAGCGAAGGTCCTC
JMFF022L17+           GTATGTCTTCAATATACTTGTACGCTTCGAAAGAACCGCCAGGCATTAGCGAAGGTCCTC
                      ____________________________________________________________
consensus             GTATGTCTTCAATATACTTGTACGCTTCGAAAGAACCGCCAGGCATTAGCGAAGGTCCTC
 
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JMFF018L21+           TCCTAGCACCTTCTTCACCGCCCGAGACTCCCATTCCGAGATAAAGCAAGCCCTTCTCCG
JMFF034D15+                               CCCGAGACTCCCATTCCGAGATAAAGCAAGCCCTTCTCCG
JMFF022L17+           TCCTAGCACCTTCTTCACCGCCCGAGACTCCCATTCCGAGATAAAGCAAGCCCTTCTCCG
                      ____________________________________________________________
consensus             TCCTAGCACCTTCTTCACCGCCCGAGACTCCCATTCCGAGATAAAGCAAGCCCTTCTCCG
 
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JMFF018L21+           CCGCTTCTTTCGCCCTCCTCTCGGTGTTCTCGTACCACTCATTCCCACCGTCGATAATAC
JMFF034D15+           CCGCTTCTTTCGCCCTCCTCTCGGTGTTCTCGTACCACTCATTCCCACCGTCGATAATAC
JMFF022L17+           CCGCTTCTTTCGCCCTCCTCTCGGTGTTCTCGTACCACTCATTCCCACCGTCGATAATAC
                      ____________________________________________________________
consensus             CCGCTTCTTTCGCCCTCCTCTCGGTGTTCTCGTACCACTCATTCCCACCGTCGATAATAC
 
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JMFF018L21+           AATCTCCTTTCTCCATATAAGCGGAAAGGGTCTTGATGGTTTGATCCACCGGTGCACCGG
JMFF034D15+           AATCTCCTTTCTCCATATAAGCGGAAAGGGTCTTGATGGTTTGATCCACCGGTGCACCGG
JMFF022L17+           AATCTCCTTTCTCCATATAAGCGGAAAGGGTCTTGATGGTTTGATCCACCGGTGCACCGG
                      ____________________________________________________________
consensus             AATCTCCTTTCTCCATATAAGCGGAAAGGGTCTTGATGGTTTGATCCACCGGTGCACCGG
 
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JMFF018L21+           CCTTAACAAGAATGATAATGACACGGGGCTTTTGGATGGAGAGAACAAAGGACTCGGGAT
JMFF034D15+           CCTTAACAAGAATGATAATGACACGGGGCTTTTGGATGGAGAGAACAAAGGACTCGGGAT
JMFF022L17+           CCTTAACAAGAGTGATAATGACACGGGGCTTTTGGATGGAGAGAACAAAGGACTCGGGAT
                      ____________________________________________________________
consensus             CCTTAACAAGAATGATAATGACACGGGGCTTTTGGATGGAGAGAACAAAGGACTCGGGAT
 
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JMFF018L21+           CATGAAAACCATACAGAGGGAGCCCTCCTTCCGCTTTAGCCCGTTCAACGGTCTCATCGA
JMFF034D15+           CATGAAAACCATACAGAGGGAGCCCTCCTTCCGCTTTAGCCCGTTCAACGGTCTCATCGA
JMFF022L17+           CATGAAAACCATACAGAGGGAGCCCTCCTTCCGCTTTAGCCCGTTCAACGGTCTCATCGA
                      ____________________________________________________________
consensus             CATGAAAACCATACAGAGGGAGCCCTCCTTCCGCTTTAGCCCGTTCAACGGTCTCATCGA
 
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JMFF018L21+           CTTTCGAAGTGGATCTGTTGTAGACCGATATAGGGAATCCTTTCTCGGCTATGTTAAGAG
JMFF034D15+           CTTTCGAAGTGGATCTGTTGTAGACCGATATAGGGAATCCTTTCTCGGCTATGTTAAGAG
JMFF022L17+           CTTTCGAAGTGGATCTGTTGTAGACCGATATAGGGAATCCTTTCTCGGCTATGTTAAGAG
                      ____________________________________________________________
consensus             CTTTCGAAGTGGATCTGTTGTAGACCGATATAGGGAATCCTTTCTCGGCTATGTTAAGAG
 
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JMFF018L21+           CGAGATTTTGCCCCATTACAGCAAGCCCAGCAAGACCAATTCGTGTTGGGGTCGCCATAC
JMFF034D15+           CGAGATTTTGCCCCATTACAGCAAGCCCAGCAAGACCAATTCGTGTTGGGGTCGCCATAC
JMFF022L17+           CGAGATTTTGCCCCATTACAGCAAGCCCAGCAAGACCAATTCGTGTTGGGGTCGCCATAC
                      ____________________________________________________________
consensus             CGAGATTTTGCCCCATTACAGCAAGCCCAGCAAGACCAATTCGTGTTGGGGTCGCCATAC
 
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JMFF018L21+           TGTT                                                        
JMFF034D15+           TGTT                                                        
JMFF022L17+           TGTTCTTCCTAATAGTTGAAAATGTTTGGAGTTGAAAAGGTGGAGAGCGTTGAGAGAAAT
                      ____________________________________________________________
consensus             TGTTCTTCCTAATAGTTGAAAATGTTTGGAGTTGAAAAGGTGGAGAGCGTTGAGAGAAAT