Contig 001672:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022D15Sequence522001672 (4)733006855 (3)gb|KDP38593.1|4e-102hypothetical protein JCGZ_04518 [Jatropha curcas]
JMFF026D22Sequence588001672 (4)ref|XP_006352062.1|2e-13PREDICTED: abhydrolase domain-containing protein 4-like [Solanum tuberosum]725006855 (3)gb|KDP38593.1|2e-103hypothetical protein JCGZ_04518 [Jatropha curcas]
JMSF007L20Sequence288001672 (4)780006855 (3)gb|KDP38593.1|2e-117hypothetical protein JCGZ_04518 [Jatropha curcas]
JMSF019L09Sequence573001672 (4)gb|KJB58136.1|2e-34hypothetical protein B456_009G196500 [Gossypium raimondii]

Alignment

This contig is upended


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JMSF019L09+                                              TTGCTGTCAAAGCTAACTGTATTTA
                      ____________________________________________________________
consensus                                                TTGCTGTCAAAGCTAACTGTATTTA
 
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JMSF019L09+           TGAACCTCGGTTCGTTGCTTGCGGATCTAAACCACCTAATTTTGGACCCCGGCGGACCGG
                      ____________________________________________________________
consensus             TGAACCTCGGTTCGTTGCTTGCGGATCTAAACCACCTAATTTTGGACCCCGGCGGACCGG
 
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JMSF019L09+           AACCAATATTAACTCTCTCTTGAGTATAGGGAGTCTTGACAAGAGAAAGCAGGCGCTTCT
JMFF026D22+                            TCTTGAGTATAGGGAGTCTTGACAAGAGAAAGCAGGCGCTTCT
                      ____________________________________________________________
consensus             AACCAATATTAACTCTCTCTTGAGTATAGGGAGTCTTGACAAGAGAAAGCAGGCGCTTCT
 
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JMSF019L09+           CGGATTCGATGATGTGGTCCGTGGAAGTAGGGATCCACCGCAAAACAGACGGCCATAGCG
JMFF026D22+           CGGATTCGATGATGCGGTCGGTGGAAGTAGGGATCCACCGCAGAACAGACGGCCATAGCG
                      ____________________________________________________________
consensus             CGGATTCGATGATGTGGTCGGTGGAAGTAGGGATCCACCGCAGAACAGACGGCCATAGCG
 
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JMSF019L09+           ATCTCTTCTTTTCTTCCGAAGCAGCCGCGGTGGCGGCC---GCAGCCGCAGCAGAAGATG
JMFF026D22+           ATCTCTTCTTTTTTTCCGAAGCAGCCACGGTGGCGGCCGCAGCAGCAGCAGCAGAAGGTG
JMFF022D15+                                                    GCAGCAGCAGCAGAAGGTG
                      ____________________________________________________________
consensus             ATCTCTTCTTTTTTTCCGAAGCAGCCGCGGTGGCGGCCGCAGCAGCAGCAGCAGAAGGTG
 
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JMSF019L09+           AATTAATCTCTTCCGCCATCTTCACCGCCGGTTTCCGACACCTCCTCAGCACTATGCTCA
JMFF026D22+           AATTAATCTCTTCCGCCATCTTCACCGCCGGTTTCCAACACCTCTTCAGCACTATGCTCA
JMFF022D15+           AATTAATCTCTTCCGCCATCTTCACCGCCGGTTTCCAACACCTCTTCAGCACTATGCTCA
                      ____________________________________________________________
consensus             AATTAATCTCTTCCGCCATCTTCACCGCCGGTTTCCAACACCTCTTCAGCACTATGCTCA
 
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JMSF019L09+           TA-----------CAATTTCAAGAGAAGCGGCGGATTGTCGCAAGTTAGAATAATAGTCA
JMFF026D22+           TACAATTTACCCTCAATTTCAAGAGAGGCGGCGGATTGTTGCAAGTTAGAATAATAGTCA
JMSF007L20+                        CAATTTCAAGAGAGGCGGCGGATTGTTGCAAGTTAGAATAATAGTCA
JMFF022D15+           TACAATTTACCCTCAATTTCAAGAGAGGCGGCGGATTGTTGCAAGTTAGAATAATAGTCA
                      ____________________________________________________________
consensus             TACAATTTACCCTCAATTTCAAGAGAGGCGGCGGATTGTTGCAAGTTAGAATAATAGTCA
 
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JMSF019L09+           AAGCAATTGCTCTTCTTTTCAATTCAACAAATGAATGAATAGCCGCAGAGTTCTCCCTCT
JMFF026D22+           AAGCAATTGCTCTTCTTTTCAATTCAACAAATGAATGAATAGCCGCAGAGTTCTCCCTCT
JMSF007L20+           AAGCAATTGCTCTTCTTTTCAATTCAACAAATGAATGAATAGCCGCAGAGTTCTCCCTCT
JMFF022D15+           AAGCAATTGCTCTTCTTTTCAATTCAACAAATGAATGAATAGCCGCAGAGTTCTCCCTCT
                      ____________________________________________________________
consensus             AAGCAATTGCTCTTCTTTTCAATTCAACAAATGAATGAATAGCCGCAGAGTTCTCCCTCT
 
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JMSF019L09+           CCGGCAACCTATATACGCGGGTGCG-----TGGTAATTGAATGTTCCTCGAGTCCCGCGA
JMFF026D22+           CCGGCCACCTATATACGCGGGTGCGAGCGTAGGTAATAGAATGTTCCTCGAGTCCCGTGA
JMSF007L20+           CCGGCCACCTATATACGCGGGTGCGAGCGTAGGTAATAGAATGTTCCTCGAGTCCCGTGA
JMFF022D15+           CCGGCCACCTATATACGCGGGTGCGAGCGTAGGTAATAGAATGTTCCTCGAGTCCCGTGA
                      ____________________________________________________________
consensus             CCGGCCACCTATATACGCGGGTGCGAGCGTAGGTAATAGAATGTTCCTCGAGTCCCGTGA
 
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JMSF019L09+           CGATCCTACCGCCTTCGCGGAATCGCAGCCTGCTTATTCGTCTCTCCTTTATGAATCTTA
JMFF026D22+           CGATCCTACCGCCTTCGCGGAATAGCAGCCTGCTTATTCGTCTCTCCTTTTTGAATATT-
JMSF007L20+           CGATCCTACCGCCTTCGCGGAATAGCAGCCTGCTTATTCGTCTCTCCTTTTTGAATATT-
JMFF022D15+           CGATCCTACCGCCTTCGCGGAATAGCAGCCTGCTTATTCGTCTCTCCTTTTTGAATATT-
                      ____________________________________________________________
consensus             CGATCCTACCGCCTTCGCGGAATAGCAGCCTGCTTATTCGTCTCTCCTTTTTGAATATT-
 
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JMSF019L09+           CTTTTTCTGATGGCGAAAAGGATGAC                                  
JMFF026D22+           TTTTTTCTGATGGCGAAAAGGATGACGTCGCTCGCGTAAACCGTCAACGATGATTTTACA
JMSF007L20+           TTTTTTCTGATGGCGAAAAGGATGAC                                  
JMFF022D15+           TTTTTTCTGATGGCGAAAAGGATGACGTCGCTCGCGTAAACCGTCAACGATGATTTTACA
                      ____________________________________________________________
consensus             TTTTTTCTGATGGCGAAAAGGATGACGTCGCTCGCGTAAACCGTCAACGATGATTTTACA
 
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JMFF026D22+           GCGCCGACGCGCGGACGTGGAGAAATTATGCGGTCGACGATTCTCTGGAGACGTAGATTG
JMFF022D15+           GCGCCGACGCGCGGACGTGGAGAAATTATGCGGTCGACGATTCTCTGGAGACGTAGATTG
                      ____________________________________________________________
consensus             GCGCCGACGCGCGGACGTGGAGAAATTATGCGGTCGACGATTCTCTGGAGACGTAGATTG
 
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JMFF026D22+           GTCTAC                                                      
JMFF022D15+           GTCTACACGGAAATCAATATTGAATGGGATATTTGGATCGCAAGTAACGTCTGCAATGAC
                      ____________________________________________________________
consensus             GTCTACACGGAAATCAATATTGAATGGGATATTTGGATCGCAAGTAACGTCTGCAATGAC