Contig 001670:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017A18Sequence585001670 (10)ref|XP_006358424.1|3e-101PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Solanum tuberosum]709001670 (10)ref|XP_004247494.1|2e-106PREDICTED: endo-1,3;1,4-beta-D-glucanase-like isoform X2 [Solanum lycopersicum]
JMFF019K02Sequence527001670 (10)ref|XP_006358424.1|5e-88PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Solanum tuberosum]679001670 (10)ref|XP_004247494.1|2e-99PREDICTED: endo-1,3;1,4-beta-D-glucanase-like isoform X2 [Solanum lycopersicum]
JMFF021A21Sequence560014185ref|XP_010026993.1|7e-23PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Eucalyptus grandis]399001670 (10)ref|XP_009599216.1|2e-31PREDICTED: endo-1,3;1,4-beta-D-glucanase-like, partial [Nicotiana tomentosiform
JMFF022C11Sequence540001670 (10)ref|XP_006358424.1|3e-77PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Solanum tuberosum]713001670 (10)ref|XP_004247494.1|6e-107PREDICTED: endo-1,3;1,4-beta-D-glucanase-like isoform X2 [Solanum lycopersicum]
JMFF023K14Sequence518001670 (10)ref|XP_006358424.1|4e-81PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Solanum tuberosum]717001670 (10)ref|XP_004247494.1|2e-106PREDICTED: endo-1,3;1,4-beta-D-glucanase-like isoform X2 [Solanum lycopersicum]
JMFN029I22Sequence282001670 (10)ref|XP_010024438.1|5e-40PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Eucalyptus grandis]

Alignment

This contig is upended


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rJMFF021A21-                                  TGTTTTTTCCTTCAAAAGAGAGTATTGCAAACTTTA
                      ____________________________________________________________
consensus                                     TGTTTTTTCCTTCAAAAGAGAGTATTGCAAACTTTA
 
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rJMFF021A21-          AGTTCCTAACTTTCAACTTTCAATTATCTTTCACTCCAATCAAATCAAGTGTACTACTTA
rJMFF017A18-                                           CTCCAATCAAATCAAGTGTACTACTTA
rJMFF019K02-                                           CTCCAATCAAATCAAGTGTACTACTTA
rJMFF023K14-                                           CTCCAATCAAATCAAGTGTACTACTTA
rJMFF022C11-                                           CTCCAATCAAATCAAGTGTACTACTTA
                      ____________________________________________________________
consensus             AGTTCCTAACTTTCAACTTTCAATTATCTTTCACTCCAATCAAATCAAGTGTACTACTTA
 
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rJMFF021A21-          GTTCTTACATAAAAACACAGTTCACATAAAAACCAACATAACATGAGTTTTATTCAAATA
rJMFF017A18-          GTTCTTACATAAAAACACAGTTCACATAAAAACCAACATAACATGAGTTTTATTCAAATA
rJMFF019K02-          GTTCTTACATAAAAACACAGTTCACATAAAAACCAACATAACATGAGTTTTATTCAAATA
rJMFF023K14-          GTTCTTACATAAAAACACAGTTCACATAAAAACCAACATAACATGAGTTTTATTCAAATA
rJMFF022C11-          GTTCTTACATAAAAACACAGTTCACATAAAAACCAACATAACATGAGTTTTATTCAAATA
                      ____________________________________________________________
consensus             GTTCTTACATAAAAACACAGTTCACATAAAAACCAACATAACATGAGTTTTATTCAAATA
 
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rJMFF021A21-          CTCAATTGTAGTCTGCATTTCCTAGTGTGGATTTATTCATTTCACAAACTTGGTAAACCA
rJMFF017A18-          CTCAATTGTAGTCTGCATTTCCTAGTGTGGATTTATTCATTTCACAAACTTGGTAAACCA
rJMFF019K02-          CTCAATTGTAGTCTGCATTTCCTAGTGTGGATTTATTCATTTCACAAACTTGGTAAACCA
rJMFF023K14-          CTCAATTGTAGTCTGCATTTCCTAGTGTGGATTTATTCATTTCACAAACTTGGTAAACCA
rJMFF022C11-          CTCAATTGTAGTCTGCATTTCCTAGTGTGGATTTATTCATTTCACAAACTTGGTAAACCA
                      ____________________________________________________________
consensus             CTCAATTGTAGTCTGCATTTCCTAGTGTGGATTTATTCATTTCACAAACTTGGTAAACCA
 
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rJMFF021A21-          GTTCAACATGTCTTGATAGGCTTCTTCAGCACTCTGCACAGCCTTCCCATCTTCAACACT
rJMFF017A18-          GTTCAACATGTCTTGATAGGCTTCTTCAGCACTCTGCACAGCCTTCCCATCTTCAACACT
rJMFF019K02-          GTTCAACATGTCTTGATAGGCTTCTTCAGCACTCTGCACAGCCTTCCCATCTTCAACACT
rJMFF023K14-          GTTCAACATGTCTTGATAGGCTTCTTCAGCACTCTGCACAGCCTTCCCATCTTCAACACT
rJMFF022C11-          GTTCAACATGTCTTGATAGGCTTCTTCAGCACTCTGCACAGCCTTCCCATCTTCAACACT
                      ____________________________________________________________
consensus             GTTCAACATGTCTTGATAGGCTTCTTCAGCACTCTGCACAGCCTTCCCATCTTCAACACT
 
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rJMFF021A21-          GTACCTCACACTCCACCCGTGTGCCACTCCCGGAAAGATTTTCACAAAGGATTCCACCTC
rJMFF017A18-          GTACCTCACACTCCACCCGTGTGCCACTCCCGGAAAGATTTTCACAAAGGATTCCACCTC
rJMFF019K02-          GTACCTCACACTCCACCCGTGTGCCACTCCCGGAAAGATTTTCACAAAGGATTCCACCTC
rJMFF023K14-          GTACCTCACACTCCACCCGTGTGCCACTCCCGGAAAGATTTTCACAAAGGATTCCACCTC
rJMFF022C11-          GTACCTCACACTCCACCCGTGTGCCACTCCCGGAAAGACTTTCACAAAGGATTCCACCTC
                      ____________________________________________________________
consensus             GTACCTCACACTCCACCCGTGTGCCACTCCCGGAAAGATTTTCACAAAGGATTCCACCTC
 
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rJMFF021A21-          GGGTTTTGATGAAAGGATCTCTTCAAATTGTTTAACGAGCTCTGGTGGAGACATTTTGTC
rJMFF017A18-          GGGTTTTGATGAAAGGATCTCTTCAAATTGTTTAACGAGCTCTGGTGGAGACATTTTGTC
rJMFF019K02-          GGGTTTTGATGAAAGGATCTCTTCAAATTGTTTAACGAGCTCTGGTGGAGACATTTTGTC
rJMFF023K14-          GGGTTTTGATGAAAGGATCTCTTCAAATTGTTTAACGAGCTCTGGTGGAGACATTTTGTC
rJMFF022C11-          GGGTTTTGATGAAAGGATCTCTTCAAATTGTTTAACGAGCTCTGGTGGAGACATTTTGTC
JMFF017A18+                  GATGAAAGGATCTCTTCAAATTGTTTAACGAGCTCTGGTGGAGACATTTTGTC
                      ____________________________________________________________
consensus             GGGTTTTGATGAAAGGATCTCTTCAAATTGTTTAACGAGCTCTGGTGGAGACATTTTGTC
 
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rJMFF021A21-          AAT                                                         
rJMFF017A18-          AATTTCAGCCCCGAGGATAGCAGTGGGAGCCTTTACCT-CCTTAATATCGTCCACATTTA
rJMFF019K02-          AATTTCAGCCCCGAGGATAGCAGTGGGAGCCTTTACCT-CCTTAATATCGTCCACATTTA
rJMFF023K14-          AATTTCAGCCCCGAGGATAGCAGTGGGAGCCTTTACCT-CCTTAATATCGTCCACATTTA
rJMFF022C11-          AATTTCAGCCCCGAGGATAGCAGTGGGAGCCTTTACCT-CCTTAATATCGTCCACATTTA
JMFF019K02+                CAGCCCCGAGGATAGCAGTGGGAGCCTTTACCT-CCTTAATATCGTCCACATTTA
JMFF023K14+                          GATAGCAGTGGGAGCCTTTACCTCCCTTAATATCGTCCACATTTA
JMFF017A18+           AATTTCAGCCCCGAGGATAGCAGTGGGAGCCTTTACCT-CCTTAATATCGTCCACATTTA
                      ____________________________________________________________
consensus             AATTTCAGCCCCGAGGATAGCAGTGGGAGCCTTTACCT-CCTTAATATCGTCCACATTTA
 
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rJMFF017A18-          CGAATGATGGGTGCAATAGGACTGCAGCTTGAATATAACCAGACTGTGCCAGTTGCACAA
rJMFF019K02-          CGAATGATGGGTGCAATAGGACTGCAGCTTGAATATAACCAGACTGTGCCAGTTGCACAA
rJMFF023K14-          CGAATGATGGGTGCAATAGGACTGCAGCTTGAATATAACCAGACTGTGCCAGTTGCACAA
rJMFF022C11-          CGAATGATGGGTGCAATAGGACTGCAGCTTGAATATAACCAGACTGTGCCAGTTGCACAA
JMFF019K02+           CGAATGATGGGTGCAATAGGACTGCAGCTTGAATATAACCAGACTGTGCCAGTTGCACAA
JMFF023K14+           CGAATGATGGGTGCAATAGGACTGCAGCTTGAATATAACCAGACTGTGCCAGTTGCACAA
JMFF017A18+           CGAATGATGGGTGCAATAGGACTGCAGCTTGAATATAACCAGACTGTGCCAGTTGCACAA
JMFF022C11+           CGAATGATGGGTGCAATAGGACTGCAGCTTGAATATAACCAGACTGTGCCAGTTGCACAA
                      ____________________________________________________________
consensus             CGAATGATGGGTGCAATAGGACTGCAGCTTGAATATAACCAGACTGTGCCAGTTGCACAA
 
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rJMFF017A18-          CCACCTTAGCACCCCAACAGTACCCTGCAGCGCCTATCGAAGAGATCCCTTTACTCTTTA
rJMFF019K02-          CCACCTTAGCACCCCAACAGTACCCTGCAGCGCCTATCGAAGAGATCCCTTTACTCTTTA
rJMFF023K14-          CCACCTTAGCACCCCAACAGTACCCTGCAGCGCCTATCGAAGAGATCCCTTTACTCTTTA
rJMFF022C11-          CCACCTTAGCACCCCAACAGTACCCTGCAGCGCCTATCGAAGAGATCCCTTTACTCTTTA
JMFF019K02+           CCACCTTAGCACCCCAACAGTACCCTGCAGCGCCTATCGAAGAGATCCCTTTACTCTTTA
JMFF023K14+           CCACCTTAGCACCCCAACAGTACCCTGCAGCGCCTATCGAAGAGATCCCTTTACTCTTTA
JMFF017A18+           CCACCTTAGCACCCCAACAGTACCCTGCAGCGCCTATCGAAGAGATCCCTTTACTCTTTA
JMFF022C11+           CCACCTTAGCACCCCAACAGTACCCTGCAGCGCCTATCGAAGAGATCCCTTTACTCTTTA
                      ____________________________________________________________
consensus             CCACCTTAGCACCCCAACAGTACCCTGCAGCGCCTATCGAAGAGATCCCTTTACTCTTTA
 
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rJMFF017A18-          GAGCCGCAATTACAGATTTCGCATCTTCAAATCCCTTGTCTGTTCCATGCCCTTGAATCC
rJMFF019K02-          GAGCCGCAATTACAGATTTCGCATCTTCAAATCCCTTGTCTGTTCCATGCCCTTGAATCC
rJMFF023K14-          GAGCCGCAATTACAGATTTCGCATCTTCAAATCCCTTGTCTGTTCCATGCCCTTGAATCC
rJMFF022C11-          GAGCCGCAATTACAGATTTCGCATCTTCAAATCCCTTGTCTGTTCCATGCCCTTGAATCC
JMFF019K02+           GAGCCGCAATTACAGATTTCGCATCTTCAAATCCCTTGTCTGTTCCATGCCCTTGAATCC
JMFF023K14+           GAGCCGCAATTACAGATTTCGCATCTTCAAATCCCTTGTCTGTTCCATGCCCTTGAATCC
JMFF017A18+           GAGCCGCAATTACAGATTTCGCATCTTCAAATCCCTTGTCTGTTCCATGCCCTTGAATCC
JMFF022C11+           GAGCCGCAATTACAGATTTCGCATCTTCAAATCCCTTGTCTGTTCCATGCCCTTGAATCC
                      ____________________________________________________________
consensus             GAGCCGCAATTACAGATTTCGCATCTTCAAATCCCTTGTCTGTTCCATGCCCTTGAATCC
 
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rJMFF017A18-          AGTCTCCAAGAGGCTTGCTGTCAGGAACATAGGGATCTCCATATAAGAAATCAGGAACCA
rJMFF019K02-          AGTCTCCAAGAGGCTTGCTGTCAGGAACATAGGGATCTCCATATAAGAAATCAGGAACCA
rJMFF023K14-          AGTCTCCAAGAGGCTTGCTGTCAGGAACATAGGGATCTCCATATAAGAAATCAGGAACCA
rJMFF022C11-          AGTCTCCAAGAGGCTTGCTGTCAGGAACATAGGGATCTCCATATAAGAAATCAGGAACCA
JMFF019K02+           AGTCTCCAAGAGGCTTGCTGTCAGGAACATAGGGATCTCCATATAAGAAATCAGGAACCA
JMFF023K14+           AGTCTCCAAGAGGCTTGCTGTCAGGAACATAGGGATCTCCATATAAGAAATCAGGAACCA
JMFN029I22+                                      CATAGGGATCTCCATAGAAGAAATCAGGAACCA
JMFF017A18+           AGTCTCCAAGAGGCTTGCTGTCAGGAACATAGGGATCTCCATATAAGAAATCAGGAACCA
JMFF022C11+           AGTCTCCAAGAGGCTTGCTGTCAGGAACATAGGGATCTCCATATAAGAAATCAGGAACCA
                      ____________________________________________________________
consensus             AGTCTCCAAGAGGCTTGCTGTCAGGAACATAGGGATCTCCATATAAGAAATCAGGAACCA
 
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rJMFF017A18-          CAACATAGTATCCACTAGCTGCAACTTTGTCAGCTATCTTCCTGAGATTTGGAGATTCAT
rJMFF019K02-          CAACATAGTATCCACTAGCTGCAACTTTGTCAGCTATCTTCCTGA               
rJMFF023K14-          CAACATAGTATCCACTAGCTGCAACTTTGTCAGCTATCTTCCTGAGATTTGGAGATTCAT
rJMFF022C11-          CAACATAGTATCCACTAGCTGCAACTTTGTCAGCTATCTTCCTGAGATTTGGAGATTCAT
JMFF019K02+           CAACATAGTATCCACTAGCTGCAACTTTGTCAGCTATCTTCCTGAGATTTGGAGATTCAT
JMFF023K14+           CAACATAGTATCCACTAGCTGCAACTTTGTCAGCTATCTTCCTGAGATTTGGAGATTCAT
JMFN029I22+           CAACATAATATCCATTAGCTGCAACTTTGTCAGCTATCTTCCTGAGATTGGGAGCTTCAA
JMFF017A18+           CAACATAGTATCCACTAGCTGCAACTTTGTCAGCTATCTTCCTGAGATTTGGAGATTCAT
JMFF022C11+           CAACATAGTATCCACTAGCTGCAACTTTGTCAGCTATCTTCCTGAGATTTGGAGATTCAT
                      ____________________________________________________________
consensus             CAACATAGTATCCACTAGCTGCAACTTTGTCAGCTATCTTCCTGAGATTTGGAGATTCAT
 
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rJMFF017A18-          AACCAAAAATGTCG                                              
rJMFF023K14-          AACCAAAAATGTCGG                                             
rJMFF022C11-          AACCAAAAATGTCGGA                                            
JMFF019K02+           AACCAAAAATGTCGGAGACGAGAAGGATAGCGTGGTTGGAATTGGCAGCGCCGGTGACAT
JMFF023K14+           AACCAAAAATGTCGGAGACGAGAAGGATAGCGTGGTTGGAATTGGCAGCGCCGGTGACAT
JMFN029I22+           AACCAAAAACGTCGGAGGCGAGGAGGATAGCGAGGTTGGAATCGGAAGAACCGGTAACAT
JMFF017A18+           AACCAAAAATGTCGGAGACGAGAAGGATAGCGTGGTTGGAATTGGCAGCGCCGGTGACAT
JMFF022C11+           AACCAAAAATGTCGGAGACGAGAAGGATAGCGTGGTTGGAATTGGCAGCGCCGGTGACAT
                      ____________________________________________________________
consensus             AACCAAAAATGTCGGAGACGAGAAGGATAGCGTGGTTGGAATTGGCAGCGCCGGTGACAT
 
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JMFF019K02+           ATGACTTGAGGCCGCCCAGCTCCACAACCGACCCAACTCCGGCGCTCGGATTCAAAGTGG
JMFF023K14+           ATGACTTGAGGCCGCCCAGCTCCACAACCGACCCAACTCCGGCGCTCGGATTCAAAGTGG
JMFN029I22+           ATGAGTTGAGGCCGCCCAGCTCCACCACCGACCCAACTCCGGCGCTTGGATCCAAAGTGG
JMFF017A18+           ATGACTTGAGGCCGCCCAGCTCCACAACCGACCCAACTCCGGCGCTCGGATTCAAAGTGG
JMFF022C11+           ATGACTTGAGGCCGCCCAGCTCCACAACCGACCCAACTCCGGCGCTCGGATTCAAAGTGG
                      ____________________________________________________________
consensus             ATGACTTGAGGCCGCCCAGCTCCACAACCGACCCAACTCCGGCGCTCGGATTCAAAGTGG
 
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JMFF019K02+           GTGGATTCTCACAGCACTGCGGCCCAGACATGTTGTTGATGAATGATGAATTC       
JMFF023K14+           GTGGATTCTCACAGCACTGCGGCCCAGACATGTTGTTGATGAATGATGAATTC       
JMFN029I22+           GTGGATTCTCACAGCATTGAGGCCCAGACAT                             
JMFF017A18+           GTGGATTCTCACAGCACTGCGGCCCAGACATGTTGTTGATGAATGATGAATTC       
JMFF022C11+           GTGGATTCTCACAGCACTGCGGCCCAGACATGTTGTTGATGAATGATGAATTCGATCTTC
                      ____________________________________________________________
consensus             GTGGATTCTCACAGCACTGCGGCCCAGACATGTTGTTGATGAATGATGAATTCGATCTTC
 
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JMFF022C11+           TTCCCAGATAGTAGCTGCGAGTTTCAAATGCGTTGTAGGAGCGACGACTAGGTAGTAGCT
                      ____________________________________________________________
consensus             TTCCCAGATAGTAGCTGCGAGTTTCAAATGCGTTGTAGGAGCGACGACTAGGTAGTAGCT