| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF021J19 | Sequence | 467 | 001668 (7) | emb|CDP16644.1| | 3e-17 | unnamed protein product [Coffea canephora] | 636 | 001668 (7) | ref|XP_010111649.1| | 2e-09 | hypothetical protein L484_017676 [Morus notabilis] gb|EXC31394.1| hypothetical p |
| JMFF043D03 | Sequence | 634 | 001668 (7) | ref|XP_009605471.1| | 89.4 | PREDICTED: uncharacterized protein LOC104100021 [Nicotiana tomentosiformis] | 585 | 001668 (7) | |||
| JMFN012I20 | Sequence | 625 | 001668 (7) | ref|XP_010248805.1| | 108 | PREDICTED: uncharacterized protein LOC104591601 [Nelumbo nucifera] | |||||
| JMFN031M05 | Sequence | 504 | 001668 (7) | emb|CDP16644.1| | 3e-17 | unnamed protein product [Coffea canephora] | |||||
| JMFN033L08 | Sequence | 579 | 001668 (7) | ref|XP_009804900.1| | 76.6 | PREDICTED: uncharacterized protein LOC104250061 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF043D03- TTTTTTTTTTTTTTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX
____________________________________________________________
consensus TTTTTTTTTTTTTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
. : . : . : . : . : . :
rJMFF043D03- XXXXXXXXXXXXXXXXACAAAAAACTGGGGGCCCCCCCCTACCCGTAACACTTACATTAC
rJMFF021J19- CCTACACGTAACACTTACATTAC
____________________________________________________________
consensus NNNNNNNNNNNNNNNNACAAAAAACTGGGGGCCCCCCCCTACCCGTAACACTTACATTAC
. : . : . : . : . : . :
rJMFF043D03- ATTTTTTTTTCCAATACCCCTACTTTACATTTTTTAACATAAAACTTTAAATATATTTTT
rJMFF021J19- ATTTTTTTTTCGAATACACCTACATTACATTTATTAACATAAAACTTTAAATATATATAT
____________________________________________________________
consensus ATTTTTTTTTCGAATACCCCTACTTTACATTTTTTAACATAAAACTTTAAATATATTTTT
. : . : . : . : . : . :
rJMFF043D03- TTAAGAGTAATACATACAATTATTATATGACTAAAAGATACGGATTAAATTTAATTCTGG
rJMFF021J19- ATAAGAGTAATACATACAATTATTATATGACTAAAAGATACGGATTAAATTTAATTCTGT
____________________________________________________________
consensus TTAAGAGTAATACATACAATTATTATATGACTAAAAGATACGGATTAAATTTAATTCTGT
. : . : . : . : . : . :
rJMFF043D03- GATTAATCCTATCTTAATTAATTAATTAATTACATTTCTTCAACTAAACACCAACCTTCA
rJMFF021J19- GATTAATCATATCTTAATTAATTAATTAATTACATTTCTTCAACTAGACACCAACCTTCA
JMFN012I20+ TAATTAATTAATTAATTACATTTCTTCAACTAGACACCAACCTTCA
JMFF043D03+ TAATTAATTAATTAATTACATTTCTTCAACTAGACACCAACC-TCA
____________________________________________________________
consensus GATTAATCCTATCTTAATTAATTAATTAATTACATTTCTTCAACTAGACACCAACCTTCA
. : . : . : . : . : . :
rJMFF043D03- TCTCCCTCTACTTGTTCCAACAGGAATCCCCCCTCACAAAAGCTTATCGCATCGTCATCG
rJMFF021J19- TCTCCCTCTACTTGTTCCAACAGGAATCCCACCTCACAGAAGCTTATCGCATCGTCATCG
JMFN012I20+ TCTCCCTCTACTTGTTCCAACAGGAATCCCACCTCACAGAAGCTTATCGCATCGTCATCG
JMFN033L08+ TGTTCCAACAGGAATCCCACCTCACAGAAGCTTATCGCATCGTCATCG
JMFF043D03+ TCTCCCTCTAC-TGTTCCAACAGGAATCCCACCTCACAGAAGCTTATCGCATCGTCATCG
____________________________________________________________
consensus TCTCCCTCTACTTGTTCCAACAGGAATCCCACCTCACAGAAGCTTATCGCATCGTCATCG
. : . : . : . : . : . :
rJMFF043D03- ACGTCGACGTCAACGTCATCCCCGCCGTCGAGGGCACCGTAATCGCCCGCCTCAATTTGG
rJMFF021J19- ACGTCGACGTCGACGTCATCGCCGCCGTCGAGGTCACCGTAATCGTCCGCCTCAATTTGG
JMFN031M05+ CGACGTCGACGTCATCGCCGCCGTCGAGGTCACCGTAATCGTCCGCCTCAATTTGG
JMFN012I20+ ACGTCGACGTCGACGTCATCGCCGCCGTCGAGGTCACCGTAATCGTCCGCCTCAATTTGG
JMFN033L08+ ACGTCGACGTCGACGTCATCGCCGCCGTCGAGGTCACCGTAATCGTCCGCCTCAATTTGG
JMFF043D03+ ACGTCGACGTCGACGTCATCGCCGCCGTCGAGGTCACCGTAATCGTCCGCCTCAATTTGG
____________________________________________________________
consensus ACGTCGACGTCGACGTCATCGCCGCCGTCGAGGTCACCGTAATCGTCCGCCTCAATTTGG
. : . : . : . : . : . :
rJMFF043D03- ACGGACAACGGCGACGGGACGAAATCCAAATCGACAAATAAACCGGGGGGGAAATAATCC
rJMFF021J19- ACGGACAACGGCGACGGGACGAAATCCAAATCGACAAATAAACCGGGTGGGAGATAATCC
JMFN031M05+ ACGGACAACGGCGACGGGACGAAATCCAAATCGACAAATAAACCGGGTGGGAGATAATCC
JMFN012I20+ ACGGACAACGGCGACGGGACGAAATCCAAATCGACAAATAAACCGGGTGGGAGATAATCC
JMFN033L08+ ACGGACAACGGCGACGGGACGAAATCCAAATCGACAAATAAACCGGGTGGGAGATAATCC
JMFF043D03+ ACGGACAACGGCGACGGGACGAAATCCAAATCGACAAATAAACCGGGTGGGAGATAATCC
JMFF021J19+ ACGGGACGAAATCCAAATCGACAAATAAACCGGGTGGGAGATAATCC
____________________________________________________________
consensus ACGGACAACGGCGACGGGACGAAATCCAAATCGACAAATAAACCGGGTGGGAGATAATCC
. : . : . : . : . : . :
rJMFF043D03- AAACCGCCGGATTCTTCGGGCACGTCATCGAAATCGGAATCATAATCATAATCCATGTAA
rJMFF021J19- AAACCGCCGGATTCTTCGTGCACGTCATCGTAATCGTAATCATAATCATAATCCATGTAA
JMFN031M05+ AAACCGCCGGATTCTTCGTGCACGTCATCGTAATCGTAATCATAATCATAATCCATGTAA
JMFN012I20+ AAACCGCCGGATTCTTCGTGCACGTCATCGTAATCGTAATCATAATCATAATCCATGTAA
JMFN033L08+ AAACCGCCGGATTCTTCGTGCACGTCATCGTAATCGTAATCATAATCATAATCCATGTAA
JMFF043D03+ AAACCGCCGGATTCTTCGTGCACGTCATCGTAATCGTAATCATAATCATAATCCATGTAA
JMFF021J19+ AAACCGCCGGATTCTTCGTGCACGTCATCGTAATCGTAATCATAATCATAATCCATGTAA
____________________________________________________________
consensus AAACCGCCGGATTCTTCGTGCACGTCATCGTAATCGTAATCATAATCATAATCCATGTAA
. : . : . : . : . : . :
rJMFF043D03- TCGGGGGCGGCGAAACGATCCAAAATCCCGGGGGCCGATAAGCCGGAAAATTTAAAGCCG
rJMFF021J19- TCGGCGGCGGCGAAACGATCCAAAATCCCGGTGGCCGATAAGCCGGAAAATTTAAAGCCG
JMFN031M05+ TCGGCGGCGGCGAAACGATCCAAAATCCCGGTGGCCGATAAGCCGGAAAATTTAAAGCCG
JMFN012I20+ TCGGCGGCGGCGAAACGATCCAAAATCCCGGTGGCCGATAAGCCGGAAAATTTAAAGCCG
JMFN033L08+ TCGGCGGCGGCGAAACGATCCAAAATCCCGGTGGCCGATAAGCCGGAAAATTTAAAGCCG
JMFF043D03+ TCGGCGGCGGCGAAACGATCCAAAATCCCGGTGGCCGATAAGCCGGAAAATTTAAAGCCG
JMFF021J19+ TCGGCGGCGGCGAAACGATCCAAAATCCCGGTGGCCGATAAGCCGGAAAATTTAAAGCCG
____________________________________________________________
consensus TCGGCGGCGGCGAAACGATCCAAAATCCCGGTGGCCGATAAGCCGGAAAATTTAAAGCCG
. : . : . : . : . : . :
rJMFF043D03- G
rJMFF021J19- GGTCCGCCATCGGCGACCCGAGNGGTCAATCTATAGCTAGAAACGACGACGTCGCGGG
JMFN031M05+ GGTCCGCCATCGGCGACCCGAGTGGTCAATCTATAGCTAGAAACGACGACGTCGCGGGAT
JMFN012I20+ GGTCCGCCATCGGCGACCCGAGTGGTCAATCTATAGCTAGAAACGACGACGTCGCGGGAT
JMFN033L08+ GGTCCGCCATCGGCGACCCGAGTGGTCAATCTATAGCTAGAAACGACGACGTCGCGGGAT
JMFF043D03+ GGTCCGCCATCGGCGACCCGAGTGGTCAATCTATAGCTAGAAACGACGACGTCGCGGGAT
JMFF021J19+ GGTCCGCCATCGGCGACCCGAGTGGTCAATCTATAGCTAGAAACGACGACGTCGCGGGAT
____________________________________________________________
consensus GGTCCGCCATCGGCGACCCGAGTGGTCAATCTATAGCTAGAAACGACGACGTCGCGGGAT
. : . : . : . : . : . :
JMFN031M05+ CTGAGCTTGTGCGTCCCCTTGGCCTTGTCCTTGGCTTTACCGACGTGATGGGCGCACTTG
JMFN012I20+ CTGAGCTTGTGCGTCCCCTTGGCCTTGTCCTTGGCTTTACCGACGTGATGGGCGCACTTG
JMFN033L08+ CTGAGCTTGTGCGTCCCCTTGGCCTTGTCCTTGGCTTTACCGACGTGATGGGCGCACTTG
JMFF043D03+ CTGAGCTTGTGCGTCCCCTTGGCCTTGTCCTTGGCTTTACCGACGTGATGGGCGCACTTG
JMFF021J19+ CTGAGCTTGTGCGTCCCCTTGGCCTTGTCCTTGGCTTTACCGACGTGATGGGCGCACTTG
____________________________________________________________
consensus CTGAGCTTGTGCGTCCCCTTGGCCTTGTCCTTGGCTTTACCGACGTGATGGGCGCACTTG
. : . : . : . : . : . :
JMFN031M05+ GAGCGGATGCGAGTCGGGGAGACTCTGAGCAAGAGCCCCGCCGCCGTTGGGGGCGAGTCG
JMFN012I20+ GAGCGGATGCGAGTCGGGGAGACTCTGAGCAAGAGCCCCGCCGCCGTTGGGGGCGAGTCG
JMFN033L08+ GAGCGGATGCGAGTCGGGGAGACTCTGAGCAAGAGCCCCGCCGCCGTTGGGGGCGAGTCG
JMFF043D03+ GAGCGGATGCGAGTCGGGGAGACTCTGAGCAAGAGCCCCGCCGCCGTTGGGGGCGAGTCG
JMFF021J19+ GAGCGGATGCGAGTCGGGGAGACTCTGAGCAAGAGCCCCGCCGCCGTTGGGGGCGAGTCG
____________________________________________________________
consensus GAGCGGATGCGAGTCGGGGAGACTCTGAGCAAGAGCCCCGCCGCCGTTGGGGGCGAGTCG
. : . : . : . : . : . :
JMFN031M05+ GATAGCTTGTTGGCGGAGGTGGAGGGGCCGAATTTGGGGCTCCATGGGACCATTCCATTT
JMFN012I20+ GATAGCTTGTTGGCGGAGGTGGAGGGGCCGAATTTGGGGCTCCATGGGACCATTCCATTT
JMFN033L08+ GATAGCTTGTTGGCGGAGGTGGAGGGGCCGAA-TTGGGGCTCCATGGGACCATTCCATTT
JMFF043D03+ GATAGCTTGTTGGCGGAGGTGGAGGGGCCGAATTTGGGGCTCCATGGGACCATTCCATTT
JMFF021J19+ GATAGCTTGTTGGCGGAGGTGGAGGGGCCGAATTTGGGGCTCCATGGGACCATTCCATTT
____________________________________________________________
consensus GATAGCTTGTTGGCGGAGGTGGAGGGGCCGAATTTGGGGCTCCATGGGACCATTCCATTT
. : . : . : . : . : . :
JMFN031M05+ TGGCGACCTTCTTTCTTCATTATCGATT
JMFN012I20+ TGGCGACCTTCTTTCTTCATTATCGATTGGAAG
JMFN033L08+ TGGCGACCTTCTTTCTTCATTATCGATTGGAAGTGAATTGAGCTAAGAGA
JMFF043D03+ TGGCGACCTTCTTTCTTCATTATCGATTGGAAGCGAATTGAGCTAAGAGA
JMFF021J19+ TGGCGACCTTCTTTCTTCATTATCGATTGGAAGTGAATTGAGCTAAGAGAGAGATATATT
____________________________________________________________
consensus TGGCGACCTTCTTTCTTCATTATCGATTGGAAGTGAATTGAGCTAAGAGAGAGATATATT