Contig 001654:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018M09Sequence589001654 (7)ref|XP_009601832.1|137PREDICTED: uncharacterized protein LOC104097031 [Nicotiana tomentosiformis]776019100ref|XP_006345449.1|221PREDICTED: uncharacterized protein LOC102591103 [Solanum tuberosum]
JMFF046B03Sequence570001654 (7)ref|XP_009601832.1|137PREDICTED: uncharacterized protein LOC104097031 [Nicotiana tomentosiformis]375001654 (7)ref|XP_006345449.1|94.0PREDICTED: uncharacterized protein LOC102591103 [Solanum tuberosum]
JMSF029D09Sequence618001654 (7)ref|XP_009601832.1|260PREDICTED: uncharacterized protein LOC104097031 [Nicotiana tomentosiformis]742001654 (7)ref|XP_009601832.1|249PREDICTED: uncharacterized protein LOC104097031 [Nicotiana tomentosiformis]
JMSF032B15Sequence735001654 (7)ref|XP_009601832.1|263PREDICTED: uncharacterized protein LOC104097031 [Nicotiana tomentosiformis]754001654 (7)ref|XP_009601832.1|249PREDICTED: uncharacterized protein LOC104097031 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF032B15-                                                            ACATCACACT
                      ____________________________________________________________
consensus                                                               ACATCACACT
 
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rJMSF032B15-          AGTAACATACTCCTTATTAAATACCACCATAAGAACTCTAAATTAACCTCTAAGGTCCCA
rJMFF046B03-                                                                GTCCCA
rJMSF029D09-              ACATACTCCTTATTAAATACCACCATAAGAACTCTAAATTAACCTCTAA-GTCCCA
                      ____________________________________________________________
consensus             AGTAACATACTCCTTATTAAATACCACCATAAGAACTCTAAATTAACCTCTAAGGTCCCA
 
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rJMSF032B15-          TATACTTCTTTGGGAGAAGAAAACATTGTTAAATTCTACCAGCAATACAAATGAGATAGC
rJMFF046B03-          TATACTTCTTTGGGAGAAGAAAACATTGTTAAATTCTACCAGCAATACAAATGAGATAGC
rJMSF029D09-          TATACTTCTTTGGGAGAAGAAAACATTGTTAAATTCTACCAGCAATACAAATGAGATAGC
JMSF032B15+                                                       ATACAAATGAGATAGC
                      ____________________________________________________________
consensus             TATACTTCTTTGGGAGAAGAAAACATTGTTAAATTCTACCAGCAATACAAATGAGATAGC
 
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rJMSF032B15-          AGCATTCAGAACAGTCTATGGTAGACAGAAGACAATTTTGTTTATCAAGATGAGAAAATG
rJMFF046B03-          AGCATTCAGAACAGTCTATGGTAGACAGAAGACAATTTTGTTTATCAAGATGAGAAAATG
rJMSF029D09-          AGCATTCAGAACAGTCTATGGTAGACAGAAGACAATTTTGTTTATCAAGATGAGAAAATG
JMSF032B15+           AGCATTCAGAACAGTCTATGGTAGACAGAAGACAATTTTGTTTATCAAGATGAGAAAATG
                      ____________________________________________________________
consensus             AGCATTCAGAACAGTCTATGGTAGACAGAAGACAATTTTGTTTATCAAGATGAGAAAATG
 
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rJMSF032B15-          AACCAATGAAGCGGAAAATCTTGGAAGGAAAGCATATATATATATATATGTCCTATGAAT
rJMFF046B03-          AACCAATGAAGCGGAAAATCTTGGAAGGAAAGCATATATATATATATATGTCCTATGAAT
rJMSF029D09-          AACCAATGAAGCGGAAAATCTTGGAAGGAAAGCATATATATATATATATGTCCTATGAAT
JMSF032B15+           AACCAATGAAGCGGAAAATCTNGGAAGGAAAGCATATATATATATATATGTCCTATGAAT
                      ____________________________________________________________
consensus             AACCAATGAAGCGGAAAATCTTGGAAGGAAAGCATATATATATATATATGTCCTATGAAT
 
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rJMSF032B15-          CCATATTTTCTGCATTTTCATCATCTTCAGATGGCCATATAACAGTTTGAAAGAGGCGCT
rJMFF046B03-          CCATATTTTCTGCATTTTCATCATCTTCAGATGGCCATATAACAGTTTGAAAGAGGCGCT
rJMSF029D09-          CCATATTTTCTGCATTTTCATCATCTTCAGATGGCCATATAACAGTTTGAAAGAGGCGCT
JMSF032B15+           CCATATTTTCTGCATTTTCATCATCTTCAGATGGCCATATAACAGTTTGAAAGAGGCGCT
JMSF029D09+                                 ATCTTCAGATGGCCATATAACAGTTTGAAAGAGGCGCT
                      ____________________________________________________________
consensus             CCATATTTTCTGCATTTTCATCATCTTCAGATGGCCATATAACAGTTTGAAAGAGGCGCT
 
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rJMSF032B15-          CCCGCATCATCTCAACGTTCTCTTTGGAGATTCTTTTGTACATTTCTGCGTGATCACATC
rJMFF046B03-          CCCGCATCATCTCAACGTTCTCTTTGGAGATTCTTTTGTACATTTCTGCGTGATCACATC
rJMSF029D09-          CCCGCATCATCTCAACGTTCTCTTTGGAGATTCTTTTGTACATTTCTGCGTGATCACATC
JMSF032B15+           CCCGCATCATCTCAACGTTCTCTTTGGAGATTCTTTTGTACATTTCTGCGTGATCACATC
JMSF029D09+           CCCGCATCATCTCAACGTTCTCTTTGGAGATTCTTTTGTACATTTCTGCGTGATCACATC
                      ____________________________________________________________
consensus             CCCGCATCATCTCAACGTTCTCTTTGGAGATTCTTTTGTACATTTCTGCGTGATCACATC
 
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rJMSF032B15-          TCTTCATCCATATGCTATACAAGTGGAGACGCGTTATCATCACTCTTTCTGCAAGCTCCC
rJMFF046B03-          TCTTCATCCATATGCTATACAAGTGGAGACGCGTTATCATCACTC               
rJMSF029D09-          TCTTCATCCATATGCTATACAAGTGGAGACGCGTTATCATCACTCTTTCTGCAAGCTCCC
JMSF032B15+           TCTTCATCCATATGCTATACAAGTGGAGACGCGTTATCATCACTCTTTCTGCAAGCTCCC
JMSF029D09+           TCTTCATCCATATGCTATACAAGTGGAGACGCGTTATCATCACTCTTTCTGCAAGCTCCC
                      ____________________________________________________________
consensus             TCTTCATCCATATGCTATACAAGTGGAGACGCGTTATCATCACTCTTTCTGCAAGCTCCC
 
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rJMSF032B15-          GTCTTTCCTTGAAAAGTTCCATGAGAAACCCCTTCCCGGTGTTGGGCCCTTGCGTTGCAA
rJMSF029D09-          GTCTTTCCTTGAAAAGTTCCATGAGAAACCCCTTCCCGGTGTTGGGCCCTTGCGTTGCAA
JMSF032B15+           GTCTTTCCTTGAAAAGTTCCATGAGAAACCCCTTCCCGGTGTTGGGCCCTTGCGTTGCAA
JMSF029D09+           GTCTTTCCTTGAAAAGTTCCATGAGAAACCCCTTCCCGGTGTTGGGCCCTTGCGTTGCAA
                      ____________________________________________________________
consensus             GTCTTTCCTTGAAAAGTTCCATGAGAAACCCCTTCCCGGTGTTGGGCCCTTGCGTTGCAA
 
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rJMSF032B15-          TAAAGTTGTAGAACCACGTGTACTGCGGGGGATTCAGCTCATACAATTGGTGAAGAACGG
rJMSF029D09-          TAAAGTTGTAGAACCACGTGTACTGCGGGGGATTCAGCTCATACAATTGGTGAAGAACGG
JMSF032B15+           TAAAGTTGTAGAACCACGTGTACTGCGGGGGATTCAGCTCATACAATTGGTGAAGAACGG
JMSF029D09+           TAAAGTTGTAGAACCACGTGTACTGCGGGGGATTCAGCTCATACAATTGGTGAAGAACGG
JMFF046B03+                TTGTAGAACCACGTGTACTGCGGGGGATTCAGCTCATACAATTGGTGAAGAACGG
JMFF018M09+                TTGTAGAACCACGTGTACTGCGGGGGATTCAGCTCATACAATTGGTGAAGAACGG
                      ____________________________________________________________
consensus             TAAAGTTGTAGAACCACGTGTACTGCGGGGGATTCAGCTCATACAATTGGTGAAGAACGG
 
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rJMSF032B15-          TTCTTACAGCTTTATATGTCATCACATTCACTATCTCCTCTTTGACATCATTAAAGGAGT
rJMSF029D09-          TTCTTACAGCTTTATATGTCATCACATTCACTATCTCCTCTTTGACATCATTAAAGGAGT
JMSF032B15+           TTCTTACAGCTTTATATGTCATCACATTCACTATCTCCTCTTTGACATCATTAAAGGAGT
JMSF029D09+           TTCTTACAGCTTTATATGTCATCACATTCACTATCTCCTCTTTGACATCATTAAAGGAGT
JMFF046B03+           TTCTTACAGCTTTATATGTCATCACATTCACTATCTCCTCTTTGACATCATTAAAGGAGT
JMFF018M09+           TTCTTACAGCTTTATATGTCATCACATTCACTATCTCCTCTTTGACATCATTAAAGGAGT
                      ____________________________________________________________
consensus             TTCTTACAGCTTTATATGTCATCACATTCACTATCTCCTCTTTGACATCATTAAAGGAGT
 
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rJMSF032B15-          CGTCCGTCTGTCCTTTGAGCTCACCAAAAACAACAAATTTCCTGACTTTCTGCCTCTTTC
rJMSF029D09-          CGTCCGTCTGTCCTTTGAGCTCACCAAAAACAACAAATTTCCTGACTTTCTGCCTCTTTC
JMSF032B15+           CGTCCGTCTGTCCTTTGAGCTCACCAAAAACAACAAATTTCCTGACTTTCTGCCTCTTTC
JMSF029D09+           CGTCCGTCTGTCCTTTGAGCTCACCAAAAACAACAAATTTCCTGACTTTCTGCCTCTTTC
JMFF046B03+           CGTCCGTCTGTCCTTTGAGCTCACCAAAAACAACAAATTTCCTGACTTTCTGCCTCTTTC
JMFF018M09+           CGTCCGTCTGTCCTTTGAGCTCACCAAAAACAACAAATTTCCTGACTTTCTGCCTCTTTC
                      ____________________________________________________________
consensus             CGTCCGTCTGTCCTTTGAGCTCACCAAAAACAACAAATTTCCTGACTTTCTGCCTCTTTC
 
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rJMSF032B15-          TGGAAACCCCATTTGCAGCCCTACTGCCCAGCTTCAACTGCCGCCTTCCCTGCAAGCTTC
rJMSF029D09-          TGGAAACCCCATTTGCAGCCCTACTGCCCAGCTTCAACTGCCGCCTTCCCTGCAAGCTTC
JMSF032B15+           TGGAAACCCCATTTGCAGCCCTACTGCCCAGCTTCAACTGCCGCCTTCCCTGCAAGCTTC
JMSF029D09+           TGGAAACCCCATTTGCAGCCCTACTGCCCAGCTTCAACTGCCGCCTTCCCTGCAAGCTTC
JMFF046B03+           TGGAAACCCCATTTGCAGCCCTACTGCCCAGCTTCAACTGCCGCCTTCCCTGCAAGCTTC
JMFF018M09+           TGGAAACCCCATTTGCAGCCCTACTGCCCAGCTTCAACTGCCGCCTTCCCTGCAAGCTTC
                      ____________________________________________________________
consensus             TGGAAACCCCATTTGCAGCCCTACTGCCCAGCTTCAACTGCCGCCTTCCCTGCAAGCTTC
 
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rJMSF032B15-          TCCAGAAACCCACTTCTCCTCCGC                                    
rJMSF029D09-          TCCAGAAACCCACTTCTCCTCCGCGGG                                 
JMSF032B15+           TCCAGAAACCCACTTCTCCTCCGCGGGCCCTGAAACAGAACCTATAAGAATCGCCGCAGT
JMSF029D09+           TCCAGAAACCCACTTCTCCTCCGCGGGCCCTGAAACAGAACCTATAAGAATCGCCGCAGT
JMFF046B03+           TCCAGAAACCCACTTCTCCTCCGCGGGCCCTGAAACAGAACCTATAAGAATCGCCGCAGT
JMFF018M09+           TCCAGAAACCCACTTCTCCTCCGCGGGCCCTGAAACAGAACCTATAAGAATCGCCGCAGT
                      ____________________________________________________________
consensus             TCCAGAAACCCACTTCTCCTCCGCGGGCCCTGAAACAGAACCTATAAGAATCGCCGCAGT
 
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JMSF032B15+           TGGGGGGGTTTATGCAGAAACGGGGGGTTGGGTGTTGGGTGTCGGCAATTGAACTTGT  
JMSF029D09+           TGGGGGGGTTTATGCAGAAACGGGGGGTTGGGTGTTGGGTGTCGGCAATTGAACTTGTGG
JMFF046B03+           TGGGGGGGTTTATGCAGGAACGGGGGGTTGGGTGTTGGGTGTCGGCAATTGAACTTGTGG
JMFF018M09+           TGGGGGGGTTTATGCAGGAACGGGGGGTTGGGTGTTGGGTGTCGGCAATTGAACTTGTGG
                      ____________________________________________________________
consensus             TGGGGGGGTTTATGCAGGAACGGGGGGTTGGGTGTTGGGTGTCGGCAATTGAACTTGTGG
 
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JMSF029D09+           ATACAATAGCTCCAACCATAATGGATTATTGCCCCGGCC                     
JMFF046B03+           ATACAATAGCTCCAACCATAATGGATTATTGCCCCGGCCGGCCCCCACGATTCTTGAAAT
JMFF018M09+           ATACAATAGCTCCAACCATAATGGATTATTGCCCCGGCCGGCCCCCACGATTCTTGAAAT
                      ____________________________________________________________
consensus             ATACAATAGCTCCAACCATAATGGATTATTGCCCCGGCCGGCCCCCACGATTCTTGAAAT
 
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JMFF046B03+           GTCTTGGGATAAAGGAAAGGGGAGTAGCAGTAGAGTATTCTCTTCAGGATTCTGATCCTA
JMFF018M09+           GTCTTGGGATAAAGGAAAGGGGAGTAGCAGTAGAGTATTCTCTTCAGGATTCTGATCCTA
                      ____________________________________________________________
consensus             GTCTTGGGATAAAGGAAAGGGGAGTAGCAGTAGAGTATTCTCTTCAGGATTCTGATCCTA
 
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JMFF046B03+           CAGAATTCAGATCAGGCTAAGAACACACCGGGGAAGAATCTTTCTGTTTGTGGATACGGC
JMFF018M09+           CAGAATTCAGATCAGGCTAAGAACACACCGGGGAAGAATCTTTCTGTTTGTGGATACGGC
                      ____________________________________________________________
consensus             CAGAATTCAGATCAGGCTAAGAACACACCGGGGAAGAATCTTTCTGTTTGTGGATACGGC