| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018G16 | Sequence | 644 | 001652 (7) | ref|XP_011096503.1| | 4e-95 | PREDICTED: coatomer subunit zeta-1-like [Sesamum indicum] | 725 | 001652 (7) | ref|XP_011096503.1| | 1e-94 | PREDICTED: coatomer subunit zeta-1-like [Sesamum indicum] |
| JMFN037I19 | Sequence | 527 | 001652 (7) | gb|KJB25127.1| | 3e-46 | hypothetical protein B456_004G177800 [Gossypium raimondii] | |||||
| JMSF007F22 | Sequence | 366 | 001652 (7) | ref|XP_011096503.1| | 2e-55 | PREDICTED: coatomer subunit zeta-1-like [Sesamum indicum] | 734 | 001652 (7) | ref|XP_002273766.1| | 8e-90 | PREDICTED: coatomer subunit zeta-1-like [Vitis vinifera] |
| JMSF011N19 | Sequence | 341 | 001652 (7) | ref|XP_011096503.1| | 1e-44 | PREDICTED: coatomer subunit zeta-1-like [Sesamum indicum] | 763 | 001652 (7) | ref|XP_011096503.1| | 5e-94 | PREDICTED: coatomer subunit zeta-1-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF007F22- GGAGTTTGGTCATCTAC
____________________________________________________________
consensus GGAGTTTGGTCATCTAC
. : . : . : . : . : . :
JMFN037I19+ AATACAGTAAACTTAATGTCATAAAAATCCTCAATAAATGGGTGCAAAAATCCATAGA
rJMSF007F22- ATAATACAGTAAACTTAATGTCATAAAAATCCTCAATAAATGGGTGCAAAAATCCATAGA
rJMSF011N19- AATACAGTAAACTTAATGTCATAAAAATCCTCAATAAATGGGTGCAAAAATCCATAGA
____________________________________________________________
consensus ATAATACAGTAAACTTAATGTCATAAAAATCCTCAATAAATGGGTGCAAAAATCCATAGA
. : . : . : . : . : . :
JMFN037I19+ TTATAGGTAAGTTGGACAAAGGATTAATATATATTCACAATACAAGTTGCTATCCTCACA
rJMSF007F22- TTATAGGTAAGTTGGACAAAGGATTAATATATATTCACAATACAAGTTGCTATCCTCACA
rJMSF011N19- TTATAGGTAAGTTGGACAAAGGATTAATATATATTCACAATACAAGTTGCTATCCTCACA
rJMFF018G16- AGGTAAGTTGGACAAAGGATTAATATATATTCACAATACAAGTTGCTATCCTCACA
____________________________________________________________
consensus TTATAGGTAAGTTGGACAAAGGATTAATATATATTCACAATACAAGTTGCTATCCTCACA
. : . : . : . : . : . :
JMFN037I19+ TGAAATAGATGAGCACCACCTATCAGCATTTACTATATATGGTGATCCTTCGTTCATTCC
rJMSF007F22- TGAAATAGATGAGCACCACCTATCAGCATTTACTATATATGGTGATCCTTCGTTCATTCC
rJMSF011N19- TGAAATAGATGAGCACCACCTATCAGCATTTACTATATATGGTGATCCTTCGTTCATTCC
rJMFF018G16- TGAAATAGATGAGCACCACCTATCAGCATTTACTATATATGGTGATCCTTCGTTCATTCC
____________________________________________________________
consensus TGAAATAGATGAGCACCACCTATCAGCATTTACTATATATGGTGATCCTTCGTTCATTCC
. : . : . : . : . : . :
JMFN037I19+ CTATGGTTATTTCAACACATCATTTCAGAAGAGATCTGGTAAGATGTTCGCGAGCAGTAG
rJMSF007F22- CTATGGTTATTTCAACACATCATTTCAGAAGAGATCTGGTAAGATGTTCGCGAGCAGTAG
rJMSF011N19- CTATGGTTATTTCAACACATCATTTCAGAAGAGATCTGGTAAGATGTTCGCGAGCAGTAG
rJMFF018G16- CTATGGTTATTTCAACACATCATTTCAGAAGAGATCTGGTAAGATGTTCGCGAGCAGTAG
JMFF018G16+ CACATCATTTCAGAAGAGATCTGGTAAGATGTTCGCGAGCAGTAG
____________________________________________________________
consensus CTATGGTTATTTCAACACATCATTTCAGAAGAGATCTGGTAAGATGTTCGCGAGCAGTAG
. : . : . : . : . : . :
JMFN037I19+ CAAATGCCTGACTAATGGTCTGCTCGGTCAAAGGTGCTGCAGCATCCAAGCTATTACTGG
rJMSF007F22- CAAATGCCTGACTAATGGTCTGCTCGGTCAAAGGTGCTGCAGCATCCAAGCTATTACTGG
rJMSF011N19- CAAATGCCTGACTAATGGTCTGCTCGGTCAAAGGTGCTGCAGCATCCAAGCTATTACTGG
rJMFF018G16- CAAATGCCTGACTAATGGTCTGCTCGGTCAAAGGTGCTGCAGCATCCAAGCTATTACTGG
JMFF018G16+ CAAATGCCTGACTAATGGTCTGCTCGGTCAAAGGTGCTGCAGCATCCAAGCTATTACTGG
____________________________________________________________
consensus CAAATGCCTGACTAATGGTCTGCTCGGTCAAAGGTGCTGCAGCATCCAAGCTATTACTGG
. : . : . : . : . : . :
JMFN037I19+ CAACTTTACCAGCAATAACATTTGCATCCGTCTCAAGAACAATTCCGCCATCAACTATTT
rJMSF007F22- CAACTTTACCAGCAATAACATTTGCATCCGTCTCAAGAACAATTCCGCCATCAACTATTT
rJMSF011N19- CAACTTTACCAGCAATAACATTTGCATCCGTCTCAAGAACAATTCCGCCATCAACTATTT
rJMFF018G16- CAACTTTACCAGCAATAACATTTGCATCCGTCTCAAGAACAATTCCGCCATCAACTATTT
JMFF018G16+ CAACTTTACCAGCAATAACATTTGCATCCGTCTCAAGAACAATTCCGCCATCAACTATTT
____________________________________________________________
consensus CAACTTTACCAGCAATAACATTTGCATCCGTCTCAAGAACAATTCCGCCATCAACTATTT
. : . : . : . : . : . :
JMFN037I19+ CATCCAGACACAGAAGAATAAGATCCAAATTATCAAGTGCCTCGCTCTTTTCTACAATTC
rJMSF007F22- CATCCAGACACAGAAGAATAAGATCCAAATTATCAAGTGCCTCGCTCTTTTCTACAATTC
rJMSF011N19- CATCCAGACACAGAAGAATAAGATCCAAATTATCAAGTGCCTCGCTCTTTTCTACAATTC
rJMFF018G16- CATCCAGACACAGAAGAATAAGATCCAAATTATCAAGTGCCTCGCTCTTTTCTACAATTC
JMFF018G16+ CATCCAGACACAGAAGAATAAGATCCAAATTATCAAGTGCCTCGCTCTTTTCTACAATTC
____________________________________________________________
consensus CATCCAGACACAGAAGAATAAGATCCAAATTATCAAGTGCCTCGCTCTTTTCTACAATTC
. : . : . : . : . : . :
JMFN037I19+ CCCTAAGTAGAATACCAACTGCATCAAAGAACGCTTGGAGCACTGTGGATAGAATAAGCT
rJMSF007F22- CCCTAAGTAGAATACCAACTGCATCAAAGAACGCTTGGAGCACTGTGGATAGAATAAGCT
rJMSF011N19- CCCTAAGTAGAATACCAACTGCATCAAAGAACGCTTGGAACACTGTGGATAGAATAAGCT
rJMFF018G16- CCCTAAGTAGAATACCAACTGCATCAAAGAACGCTTGGAGCACTGTGGATAGAATAAGCT
JMSF011N19+ TGTGGATAGAATAAGCT
JMSF007F22+ GCATCAAAGAACGCTTGGAGCACTGTGGATAGAATAAGCT
JMFF018G16+ CCCTAAGTAGAATACCAACTGCATCAAAGAACGCTTGGAGCACTGTGGATAGAATAAGCT
____________________________________________________________
consensus CCCTAAGTAGAATACCAACTGCATCAAAGAACGCTTGGAGCACTGTGGATAGAATAAGCT
. : . : . : . : . : . :
JMFN037I19+ CGTTTTCTTCTTCAC-TTCCCGTAACAAAGAAATGAAGATCTTGGACAAC
rJMSF007F22- CGTTTTCTTCTTCAC-TTCCCGTAACAAAGAAATGAAGATCTTGGACAACCTTGTAAACA
rJMSF011N19- CGTTTTCTTCTTCAC-TTCCCGTAACAAAGAAATGAAGATCTTGGACAACCTTGTAAACA
rJMFF018G16- CGTTTTCTTCTTCAC-TTCCCGTAACAAAGAAATGAAGATCTTGGACAACCTTGTAAACA
JMSF011N19+ CGTTTTCTTCTTCACTTTCCCGTAACAAAGAAATGAAGATCTTGGACAACCTTGTAAACA
JMSF007F22+ CGTTTTCTTCTTCAC-TTCCCGTAACAAAGAAATGAAGATCTTGGACAACCTTGTAAACA
JMFF018G16+ CGTTTTCTTCTTCAC-TTCCCGTAACAAAGAAATGAAGATCTTGGACAACCTTGTAAACA
____________________________________________________________
consensus CGTTTTCTTCTTCAC-TTCCCGTAACAAAGAAATGAAGATCTTGGACAACCTTGTAAACA
. : . : . : . : . : . :
rJMSF007F22- ATAATGTTATTCTCAAACATCGTTATTTCCGCTTCTGTCCTAGCATTAGTCTTCTGAGTC
rJMSF011N19- ATAATGTTATTCTCAAACATCGTTATTTCCGCTTCTGTCCTAGCATTAGTCTTCTGAGTC
rJMFF018G16- ATAATGTTATTCTCAAACATCGTTATTTCCGCTTCTGTCCTAGCATTAGTCTTCTGAGTC
JMSF011N19+ ATAATGTTATTCTCAAACATCGTTATTTCCGCTTCTGTCCTAGCATTAGTCTTCTGAGTC
JMSF007F22+ ATAATGTTATTCTCAAACATCGTTATTTCCGCTTCTGTCCTAGCATTAGTCTTCTGAGTC
JMFF018G16+ ATAATGTTATTCTCAAACATCGTTATTTCCGCTTCTGTCCTAGCATTAGTCTTCTGAGTC
____________________________________________________________
consensus ATAATGTTATTCTCAAACATCGTTATTTCCGCTTCTGTCCTAGCATTAGTCTTCTGAGTC
. : . : . : . : . : . :
rJMSF007F22- TTGGCAAATAGGGCCTTCTCATAAGCTTCCTTTGCTGCATTCGTAGGCCAGTCGTCTGTA
rJMSF011N19- TTGGCAAATAGGGCCTTCTCATAAGCTTCCTTTGCTGCATTCGTAGGCCAGTCGTCTGTA
rJMFF018G16- TTGGCAAATAGGGCCTTCTCATAAGCTTCCTTTGCTGCATTCGTAGGCCAGTCGTCTGTA
JMSF011N19+ TTGGCAAATAGGGCCTTCTCATAAGCTTCCTTTGCTGCATTCGTAGGCCAGTCGTCTGTA
JMSF007F22+ TTGGCAAATAGGGCCTTCTCATAAGCTTCCTTTGCTGCATTCGTAGGCCAGTCGTCTGTA
JMFF018G16+ TTGGCAAATAGGGCCTTCTCATAAGCTTCCTTTGCTGCATTCGTAGGCCAGTCGTCTGTA
____________________________________________________________
consensus TTGGCAAATAGGGCCTTCTCATAAGCTTCCTTTGCTGCATTCGTAGGCCAGTCGTCTGTA
. : . : . : . : . : . :
rJMSF007F22- TAGTACTTGACAGCAACACGCTTTCCTTCCGAATCCAGAAGTAAAACATTCTTAACCG
rJMSF011N19- TAGTACTTGACAGCAACACGCTTTCCTTCCGAATCCAGAAGTAAAACATTCTTAACCGAA
rJMFF018G16- TAGTACTTGACAGCAACACGCTTTCCTTCCGAATCCAGAAGTAAAACATTCTTAACCGAA
JMSF011N19+ TAGTACTTGACAGCAACACGCTTTCCTTCCGAATCCAGAAGTAAAACATTCTTAACCGAA
JMSF007F22+ TAGTACTTGACAGCAACACGCTTTCCTTCCGAATCCAGAAGTAAAACATTCTTAACCGAA
JMFF018G16+ TAGTACTTGACAGCAACACGCTTTCCTTCCGAATCCAGAAGTAAAACATTCTTAACCGAA
____________________________________________________________
consensus TAGTACTTGACAGCAACACGCTTTCCTTCCGAATCCAGAAGTAAAACATTCTTAACCGAA
. : . : . : . : . : . :
rJMSF011N19- GGGCAATAGTCCATTGTGAGGAAGCTAGTGAGTCTTGACGGAAAG
rJMFF018G16- GGGCAATAGTCCATTGTGAGGAAGCTAGTGAGTCTTGACGGAAAGATCTCCGCACCTCCG
JMSF011N19+ GGGCAATAGTCCATTGTGAGGAAGCTAGTGAGTCTTGACGGAAAGATCTCCGCACCTCCG
JMSF007F22+ GGGCAATAGTCCATTGTGAGGAAGCTAGTGAGTCTTGACGGAAAGATCTCCGCACCTCCG
JMFF018G16+ GGGCAATAGTCCATTGTGAGGAAGCTAGTGAGTCTTGACGGAAAGATCTCCGCACCTCCG
____________________________________________________________
consensus GGGCAATAGTCCATTGTGAGGAAGCTAGTGAGTCTTGACGGAAAGATCTCCGCACCTCCG
. : . : . : . : . : . :
rJMFF018G16- GACAACTGAG
JMSF011N19+ GACAACTGAGAGAGAGAGAATTTC
JMSF007F22+ GACAACTGAGAGAGAGAGAATTTC
JMFF018G16+ GACAACTGAGAGAGAGAGAATTTCTGGAAGAGAGAGAGTACCTGTAAGTATGGTGTAACT
____________________________________________________________
consensus GACAACTGAGAGAGAGAGAATTTCTGGAAGAGAGAGAGTACCTGTAAGTATGGTGTAACT