Contig 001651:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018A04Sequence542001651 (2)ref|XP_004238886.1|3e-64PREDICTED: amino-acid permease BAT1 homolog isoform X3 [Solanum lycopersicum]769012284 (2)ref|XP_006344182.1|4e-130PREDICTED: amino-acid permease BAT1 homolog isoform X3 [Solanum tuberosum]
JMFF037I21Sequence504001651 (2)ref|XP_009794950.1|3e-56PREDICTED: amino-acid permease BAT1 homolog [Nicotiana sylvestris]786012284 (2)ref|XP_006344182.1|6e-135PREDICTED: amino-acid permease BAT1 homolog isoform X3 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF018A04+                                                                     AC
                      ____________________________________________________________
consensus                                                                       AC
 
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JMFF037I21+                                               CACTGACCAATAACGTTAAACCAG
JMFF018A04+           TGTGCAAGTGAAAAATCTACACTTGTTGTTACTGCCCACTGACCAATAACGTTAAACCAG
                      ____________________________________________________________
consensus             TGTGCAAGTGAAAAATCTACACTTGTTGTTACTGCCCACTGACCAATAACGTTAAACCAG
 
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JMFF037I21+           CCGGTGATCCACGAAGCAAAAGGTGCCCAGCTTGGGCCAGCAAGTTTGGCACTCCAGTAA
JMFF018A04+           CCGGTGATCCACGAAGCAAAAGGTGCCCAGCTTGGGCCAGCAAGTTTGGCACTCCAGTAA
                      ____________________________________________________________
consensus             CCGGTGATCCACGAAGCAAAAGGTGCCCAGCTTGGGCCAGCAAGTTTGGCACTCCAGTAA
 
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JMFF037I21+           TAGAGACCCCCAGAAGTGGGATAAGAAGAGCATATTTCCGCCATAGACAGCCCAACAAAC
JMFF018A04+           TAGAGACCCCCAGAAGTGGGATAAGAAGAGCATATTTCCGCCATAGACAGCCCAACAAAC
                      ____________________________________________________________
consensus             TAGAGACCCCCAGAAGTGGGATAAGAAGAGCATATTTCCGCCATAGACAGCCCAACAAAC
 
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JMFF037I21+           ATGGTGAAAGTCCCCGCAATTAGCCATCCATAGATATACGAAATCGGACCTCCAAAATTC
JMFF018A04+           ATGGTGAAAGTCCCCGCAATTAGCCATCCATAGATATACGAAATCGGACCTCCAAAATTC
                      ____________________________________________________________
consensus             ATGGTGAAAGTCCCCGCAATTAGCCATCCATAGATATACGAAATCGGACCTCCAAAATTC
 
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JMFF037I21+           AACCCAGTGCCGTAAAGGCTGTTCAGACCCGTGAGCACAGACACAACGCTGAACGAAAAC
JMFF018A04+           AACCCAGTGCCGTAAAGGCTGTTCAGACCCGTGAGCACAGACACAACGCTGAACGAAAAC
                      ____________________________________________________________
consensus             AACCCAGTGCCGTAAAGGCTGTTCAGACCCGTGAGCACAGACACAACGCTGAACGAAAAC
 
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JMFF037I21+           GCAAAATTCGACAAAACCGAGAGGTCGCGCTTGAGTTCTTGTTTGTATCCTAGCTCATGT
JMFF018A04+           GCAAAATTCGACAAAACCGAGAGGTCGCGCTTGAGTTCTTGTTTGTATCCTAGCTCATGT
                      ____________________________________________________________
consensus             GCAAAATTCGACAAAACCGAGAGGTCGCGCTTGAGTTCTTGTTTGTATCCTAGCTCATGT
 
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JMFF037I21+           AAACGTGCATGGCCTGAATCAATCGAGTCTCCGACTTCGATGGCCATGCTTTTTGTCAGA
JMFF018A04+           AAACGTGCATGGCCTGAATCAATCGAGTCTCCGACTTCGATGGCCATGCTTTTTGTCAGA
                      ____________________________________________________________
consensus             AAACGTGCATGGCCTGAATCAATCGAGTCTCCGACTTCGATGGCCATGCTTTTTGTCAGA
 
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JMFF037I21+           GCGACAACTCAAACACTCTCAGCGCCTGCAACAAAAGGAATCTTCAATCTTCAATCTTCA
JMFF018A04+           GCGACAACTCAAACACTCTCAGCGCCTGCAACAAAAGGAATCTTCAATCTTCAATCTTCA
                      ____________________________________________________________
consensus             GCGACAACTCAAACACTCTCAGCGCCTGCAACAAAAGGAATCTTCAATCTTCAATCTTCA
 
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JMFF037I21+           AATCAAACAATCCACACAGCCAGCGCTTCTCCCTCTGATCTTCTCACTTAGCTAGC    
JMFF018A04+           AATCAAACAATCCACACAGCCAGCGCTTCTCCCTCTGATCTTCTCACTTAGCTAGCTTTT
                      ____________________________________________________________
consensus             AATCAAACAATCCACACAGCCAGCGCTTCTCCCTCTGATCTTCTCACTTAGCTAGCTTTT