Contig 001649:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017O03Sequence570001649 (2)ref|XP_009619640.1|7e-87PREDICTED: actin-related protein 2/3 complex subunit 5A [Nicotiana tomentosifor555001649 (2)ref|XP_009619640.1|6e-87PREDICTED: actin-related protein 2/3 complex subunit 5A [Nicotiana tomentosifor

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF017O03+ GATTTAAGCTGAATCAATATCCAGATCTGA
JMFF017O03- GATTTAAGCTGAATCAATATCCAGATCTGA
                      ____________________________________________________________
consensus GATTTAAGCTGAATCAATATCCAGATCTGA
 
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rJMFF017O03+ AAGGTTGAGTTGGAGTTGGGTGAATGGCGAAATTCGTTGAAGCAGATAATGCAGAAGCTA
JMFF017O03- AAGGTTGAGTTGGAGTTGGGTGAATGGCGAAATTCGTTGAAGCAGATAATGCAGAAGCTA
                      ____________________________________________________________
consensus AAGGTTGAGTTGGAGTTGGGTGAATGGCGAAATTCGTTGAAGCAGATAATGCAGAAGCTA
 
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rJMFF017O03+ TAATTACAAGGATTGAGCATAAGTCCCGGAAGATCGAGAGCCTCCTCAAACAGTATAAAC
JMFF017O03- TAATTACAAGGATTGAGCATAAGTCCCGGAAGATCGAGAGCCTCCTCAAACAGTATAAAC
                      ____________________________________________________________
consensus TAATTACAAGGATTGAGCATAAGTCCCGGAAGATCGAGAGCCTCCTCAAACAGTATAAAC
 
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rJMFF017O03+ CAGTGGAAGCTCTGAAAACAGCTCTTGAAGGGTCGCCTCCCAAGACCAAAGATGAAAGAT
JMFF017O03- CAGTGGAAGCTCTGAAAACAGCTCTTGAAGGGTCGCCTCCCAAGACCAAAGATGAAAGAT
                      ____________________________________________________________
consensus CAGTGGAAGCTCTGAAAACAGCTCTTGAAGGGTCGCCTCCCAAGACCAAAGATGAAAGAT
 
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rJMFF017O03+ GCAAGTCTGCGAATTGGATTGTAGTGCACAGGGCAATTATGGCTATAAAGGATTTGGACA
JMFF017O03- GCAAGTCTGCGAATTGGATTGTAGTGCACAGGGCAATTATGGCTATAAAGGATTTGGACA
                      ____________________________________________________________
consensus GCAAGTCTGCGAATTGGATTGTAGTGCACAGGGCAATTATGGCTATAAAGGATTTGGACA
 
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rJMFF017O03+ GCTTGTTCTCTTCTCTAGATCCTGAGTACTATGATATTCTAATGAAGTACCTATACAGAG
JMFF017O03- GCTTGTTCTCTTCTCTAGATCCTGAGTACTATGATATTCTAATGAAGTACCTATACAGAG
                      ____________________________________________________________
consensus GCTTGTTCTCTTCTCTAGATCCTGAGTACTATGATATTCTAATGAAGTACCTATACAGAG
 
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rJMFF017O03+ GCTTGTCTACCGGAGATCGTCCCACTTGTGATCAATGCCTAAGAATTCATGAAAAGCTGA
JMFF017O03- GCTTGTCTACCGGAGATCGTCCCACTTGTGATCAATGCCTAAGAATTCATGAAAAGCTGA
                      ____________________________________________________________
consensus GCTTGTCTACCGGAGATCGTCCCACTTGTGATCAATGCCTAAGAATTCATGAAAAGCTGA
 
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rJMFF017O03+ CCGAGAAAGCTGGGTTGGGTTGTATAGTACGTTGTCTAGCTGACACACAAAATACCGTCT
JMFF017O03- CCGAGAAAGCTGGGTTGGGTTGTATAGTACGTTGTCTAGCTGACACACAAAATACCGTCT
                      ____________________________________________________________
consensus CCGAGAAAGCTGGGTTGGGTTGTATAGTACGTTGTCTAGCTGACACACAAAATACCGTCT
 
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rJMFF017O03+ AGTGTTGCCTCTCTCTATATGTTTCAGAGGAAGAACTATTTTGTCAAAGTCCTGCTTTGA
JMFF017O03- AGTGTTGCCTCTCTCTATATGTTTCAGAGGAAGAACTATTTTGTCAAAGTCCTGCTTTGA
                      ____________________________________________________________
consensus AGTGTTGCCTCTCTCTATATGTTTCAGAGGAAGAACTATTTTGTCAAAGTCCTGCTTTGA
 
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rJMFF017O03+ TATATACTCCACAATTGTAGCATGAATC
JMFF017O03- TATATACTCCACAATTGTAGCATGAATCATAATTAATAAACGTCTTTCTTGAATCGTTTA
                      ____________________________________________________________
consensus TATATACTCCACAATTGTAGCATGAATCATAATTAATAAACGTCTTTCTTGAATCGTTTA