Contig 001648:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF017M13-                                                               TAATAAT
                      ____________________________________________________________
consensus                                                                  TAATAAT
 
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rJMFF017M13-          ATGAATCATTCATTTCAACAAACAATTACACCCAACATTTTTTTAGTTCCCGTTAAGGGC
                      ____________________________________________________________
consensus             ATGAATCATTCATTTCAACAAACAATTACACCCAACATTTTTTTAGTTCCCGTTAAGGGC
 
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rJMFF017M13-          CTAATTTTATGGGCTCTTATTGTTTGCAAAACTGTAGATTTGATTCTCAATCTTACAATT
rJMSF036C19-                                                           ATCTTACAATT
                      ____________________________________________________________
consensus             CTAATTTTATGGGCTCTTATTGTTTGCAAAACTGTAGATTTGATTCTCAATCTTACAATT
 
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rJMFF017M13-          AATAATTATTTATGAAACACATTGCTAGGATTACAT---ACATAATCTTAGTAAACTATG
rJMSF036C19-          AATAATTATTTATGAAACACATTGCTAGGATTACATACAACACAATCTTAGTAAACTATG
                      ____________________________________________________________
consensus             AATAATTATTTATGAAACACATTGCTAGGATTACATACAACATAATCTTAGTAAACTATG
 
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rJMFF017M13-          AGCATTTTAAGCATCTAAAAGAAC---------ATTATTATTATCAACAAGGTCATCATC
rJMSF036C19-          AGCATTTTAAGCATCTAAAAGAACATCATCATTATTATTATTATTATCAAGGTCATCATC
                      ____________________________________________________________
consensus             AGCATTTTAAGCATCTAAAAGAACATCATCATTATTATTATTATTATCAAGGTCATCATC
 
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rJMFF017M13-          TTTTGTTTGACTGTCCTTTGTGCTTGTCTTACTGTTTTTGAGTTCACCATAGAAGTAGGA
rJMSF036C19-          TTTTGTTTGAGTATCCTTCGTGCTTGTCTTACTGTTTTTTAGTTCACCATAGAAGTAGGA
                      ____________________________________________________________
consensus             TTTTGTTTGAGTGTCCTTTGTGCTTGTCTTACTGTTTTTTAGTTCACCATAGAAGTAGGA
 
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rJMFF017M13-          AATGAATCCCCAGAGGGAGAGGGCAGGAGAAACGCCCTTCTCGGCTCCAAATTTCTCTTT
rJMSF036C19-          AGTGAATCCCCAGAGGGAGAGGGCAAGAGAAACGCCCTTCTCGGCTCCAAATTTTTCTTT
                      ____________________________________________________________
consensus             AGTGAATCCCCAGAGGGAGAGGGCAGGAGAAACGCCCTTCTCGGCTCCAAATTTTTCTTT
 
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rJMFF017M13-          AAAGAAGACGACGGCCAACACCTCCGTAACGGAGAGTAAGGTGGCGAGTANAATGCCGGA
rJMSF036C19-          GAAGAAGACGACGGCCAACACCTCCGTGACGGAGAGTAAGGTGGCGAGTAGAATGCCGGT
                      ____________________________________________________________
consensus             GAAGAAGACGACGGCCAACACCTCCGTGACGGAGAGTAAGGTGGCGAGTAGAATGCCGGT
 
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rJMFF017M13-          GAGAAGGGACGAACCATAGCAACTCACACCCACCATTCCTACGACAAGTAGTTGCCACAC
rJMSF036C19-          GAGAAGGGACGAACCGTAGCAACTAACACCCACCATTCCTAGGAGAAGTAGTTGCCACAC
                      ____________________________________________________________
consensus             GAGAAGGGACGAACCGTAGCAACTCACACCCACCATTCCTAGGAGAAGTAGTTGCCACAC
 
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rJMFF017M13-          GATGACACTACATATTACGACCACATAGTATGTTACTTCTTTGAAGTCGAATCCTGTTGC
rJMSF036C19-          AATGGCACTACATATTACCACCACATAGTATGTTTCTTCTTTCAGGTCGAATCCTCTTGC
                      ____________________________________________________________
consensus             GATGGCACTACATATTACGACCACATAGTATGTTTCTTCTTTGAGGTCGAATCCTGTTGC
 
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rJMFF017M13-          CTCCGATGAAATTGCCTGGAAATCCTTATTGACGATCATTCCGACGGTGCAGAAAGCGGT
rJMSF036C19-          CTCCGATGAAATTGCCTGGAAATCCTTATTGACGAGCATTCCGACGGTGCAGAAAGCGGT
                      ____________________________________________________________
consensus             CTCCGATGAAATTGCCTGGAAATCCTTATTGACGATCATTCCGACGGTGCAGAAAGCGGT
 
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rJMFF017M13-          GGCGAANAAGGACATGACCCACTGCAACTCCAGAACGAAGGTATACGTCATCCCTTCTTT
rJMSF036C19-          GGCGAAGAAGGACATGACGCACTGCAACTCCAGAACGAAGGCATACGTCATCCCTTCTTT
                      ____________________________________________________________
consensus             GGCGAAGAAGGACATGACGCACTGCAACTCCAGAACGAAGGTATACGTCATCCCTTCTTT
 
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rJMFF017M13-          CGCCATCTTGTAAGTGTGCTCAATAAGCGGCAG                           
rJMSF036C19-          CGCCATCTTGTAAGTGTACTCAATAAGCGGCAGGAAGAAGCCATAGAGCGCCGCCGCTAG
JMFS104C11+                           TACTCAATAAGCGGCAGGAAGAAGCCATAGAGCGCCGCCGCTAG
JMSF036C19+                 CTTGTAAGTGTACTCAATAAGCGGCAGGAAGAAGCCATAGAGCGCCGCCGCTAG
                      ____________________________________________________________
consensus             CGCCATCTTGTAAGTGTACTCAATAAGCGGCAGGAAGAAGCCATAGAGCGCCGCCGCTAG
 
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rJMSF036C19-          GAGCGTGAGCACGAATCCGAGGATGTAATCCTTGGTGGACTCGCCGGCCGGCTTGTCTCC
JMFS104C11+           GAGCGTGAGCACGAATCCGAGGATGTAATCCTTGGTGGACTCGCCGGCCGGCTTGTCTCC
JMSF036C19+           GAGCGTGAGCACGAATCCGAGGATGTAATCCTTGGTGGACTCGCCGGCCGGCTTGTCTCC
                      ____________________________________________________________
consensus             GAGCGTGAGCACGAATCCGAGGATGTAATCCTTGGTGGACTCGCCGGCCGGCTTGTCTCC
 
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rJMSF036C19-          GTCGGCGCCGATGGCCAAGATGGCGGCGGCGGA                           
JMFS104C11+           GTCGGCGCCGATGGCCAAGATGGCGGCGGCGGAGGTGAGGAGCACGATGGCGTTGACGGA
JMSF036C19+           GTCGGCGCCGATGGCCAAGATGGCGGCGGCGGAGGTGAGGAGCACGATGGCGTTGACGGA
JMFF017M13+                      TGGCCAAGACGGCGGCGGCGGTGGTGAGGAGCACGATGGCGTTGACGGA
                      ____________________________________________________________
consensus             GTCGGCGCCGATGGCCAAGATGGCGGCGGCGGAGGTGAGGAGCACGATGGCGTTGACGGA
 
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JMFS104C11+           GAACGGCGTGAAGCGCTGCCGGACGAGGAGGAAGGCGAAGGCGGCGGTGAAAGCGAGCTG
JMSF036C19+           GAACGGCGTGAAGCGCTGCCGGACGAGGAGGAAGGCGAAGGCGGCGGTGAAAGCGAGCTG
JMFF017M13+           GAACGGCGTGAAGCGCTGCCGGACGAGGAGGAAGGCGAAGACGGCGGTGAAGGCGAGCTG
                      ____________________________________________________________
consensus             GAACGGCGTGAAGCGCTGCCGGACGAGGAGGAAGGCGAAGGCGGCGGTGAAAGCGAGCTG
 
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JMFS104C11+           CGTGGCGAGGAGGAGGGAGGAGGTGGAGACGGGGAGCTTCGATACCCCGAAGGCGTTCAT
JMSF036C19+           CGTGGCGAGGAGGAGGGAGGAGGTGGAGACGGGGAGCTTCGATACCCCGAAGGCGTTCAT
JMFF017M13+           CGTGGCGAGGAGGAGGGAGGAGGTGGAGACGGGGAGCTTCGATACCCCGAAGGCGTTCAT
                      ____________________________________________________________
consensus             CGTGGCGAGGAGGAGGGAGGAGGTGGAGACGGGGAGCTTCGATACCCCGAAGGCGTTCAT
 
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JMFS104C11+           GTAGCCGTCGATGCCCATTAGCAGGCCGATGAAGGCGGCGGCGAGGAAGATCTTCGGTGT
JMSF036C19+           GTAGCCGTCGATGCCCATTAGCAGGCCGATGAAGGCGGCGGCGAGGAAGATCTTCGGTGT
JMFF017M13+           GTAGCCGTCGATGCCCATTAGCAGGCCGACGAAGGCGGCGGCCAGGAAGATCTTCGGAGT
                      ____________________________________________________________
consensus             GTAGCCGTCGATGCCCATTAGCAGGCCGATGAAGGCGGCGGCGAGGAAGATCTTCGGTGT
 
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JMFS104C11+           TAAGAAGGTGAGCTTAGCGGCGGGGCCTTGGGCCTTGCGGCGCTGGAAGTAGGCGGCGGC
JMSF036C19+           TAAGAAGGTGAGCTTAGCGGCGGGGCCTTGGGCCTTGCGGCGCTGGAAGTAGGCGGCGGC
JMFF017M13+           TAGGAAAGTGAGCTTAGCGGCGGGACCTTGGGCCTTGCGGCGCTGGAAGTAGGCGGCGGC
                      ____________________________________________________________
consensus             TAAGAAGGTGAGCTTAGCGGCGGGGCCTTGGGCCTTGCGGCGCTGGAAGTAGGCGGCGGC
 
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JMFS104C11+           GAGTGGGATGAACGTGACCGGAAAAGAGACGGTTTGGAGCCAGCTTGAGAACCAGACCCT
JMSF036C19+           GAGTGGGATGAACGTGACCGGAAAAGAGACGGTTTGGAGCCAGCTTGAGAACCAGACCCT
JMFF017M13+           GAGTGGGATGAAAGTGACCGGAAAAGAGACGGTTTGGAGCCAACTTGAGAACCAGACCCT
                      ____________________________________________________________
consensus             GAGTGGGATGAACGTGACCGGAAAAGAGACGGTTTGGAGCCAGCTTGAGAACCAGACCCT
 
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JMFS104C11+           CTTGCCGCCGTGGAGGAAGTAGAGGCGCGTGAGCAAAGGGCCGCCGCATTGGCCAATGGT
JMSF036C19+           CTTGCCGCCGTGGAGGAAGTAGAGGCGCGTGAGCAAAGGGCCGCCGCATTGGCCAATGGT
JMFF017M13+           CTTGCCGCCGTGGAGGAAGTAGAGGCGCGTGAGCAAAGGGCCGCCGCATTGGCCTACGGC
                      ____________________________________________________________
consensus             CTTGCCGCCGTGGAGGAAGTAGAGGCGCGTGAGCAAAGGGCCGCCGCATTGGCCAATGGT
 
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JMFS104C11+           TAGGATAATACAGCTGAAGATGAGAAAGAGACGCCTCCTCAACCTCAAGTGTGAGCTACC
JMSF036C19+           TAGGATAATACAGCTGAAGATGAGAAAGAGACGCCTCCTCAACCTCAAGTGTGAGCTACC
JMFF017M13+           TAGTATAATACAGCTGAAGATGAGTAAGAGACGCCTCCTCAACCTCAATTGTGAGCTACC
                      ____________________________________________________________
consensus             TAGGATAATACAGCTGAAGATGAGAAAGAGACGCCTCCTCAACCTCAAGTGTGAGCTACC
 
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JMFS104C11+           TACAGAAGAA                                                  
JMSF036C19+           TACAGAAGAA                                                  
JMFF017M13+           AACAGAAGAAGAAATCTCCATTTCTCTGTTTAAATTCCAACTGGCGTAGATCACAACCCT
                      ____________________________________________________________
consensus             TACAGAAGAAGAAATCTCCATTTCTCTGTTTAAATTCCAACTGGCGTAGATCACAACCCT