| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017G20 | Sequence | 536 | 001645 (7) | gb|AAM94391.1| | 3e-58 | invertase inhibitor-like protein [Ipomoea batatas] | 735 | 001645 (7) | gb|AAM94391.1| | 3e-89 | invertase inhibitor-like protein [Ipomoea batatas] |
| JMFF024E24 | Sequence | 258 | 001645 (7) | gb|AAM94391.1| | 1e-31 | invertase inhibitor-like protein [Ipomoea batatas] | |||||
| JMFF027N01 | Sequence | 367 | 001645 (7) | gb|AAM94391.1| | 6e-62 | invertase inhibitor-like protein [Ipomoea batatas] | |||||
| JMFN018B09 | Sequence | 592 | 001645 (7) | gb|AAM94391.1| | 2e-81 | invertase inhibitor-like protein [Ipomoea batatas] | |||||
| JMFN019D03 | Sequence | 632 | 001645 (7) | gb|AAM94391.1| | 2e-85 | invertase inhibitor-like protein [Ipomoea batatas] | |||||
| JMFN034I17 | Sequence | 632 | 001645 (7) | gb|AAM94391.1| | 2e-84 | invertase inhibitor-like protein [Ipomoea batatas] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF017G20- ATTGTTTTTACTTAATTAACAACCGTAACTTATTACATAATTAC
____________________________________________________________
consensus ATTGTTTTTACTTAATTAACAACCGTAACTTATTACATAATTAC
. : . : . : . : . : . :
rJMFF017G20- CTAGCTAAGCTAGATTCATCTCACACAAAAATATAAATTATACCGATCGATCCCATCCCT
____________________________________________________________
consensus CTAGCTAAGCTAGATTCATCTCACACAAAAATATAAATTATACCGATCGATCCCATCCCT
. : . : . : . : . : . :
rJMFF017G20- AGCAGGCTGCAGGCTGCAGGCGGTATTTATACTATATATAGTTGCACGTACTGCACATTT
____________________________________________________________
consensus AGCAGGCTGCAGGCTGCAGGCGGTATTTATACTATATATAGTTGCACGTACTGCACATTT
. : . : . : . : . : . :
rJMFF017G20- ATATATATAAAAAATAAAATGGATCGAGGATGGAGGATATGATGATATATTATTTCATAA
____________________________________________________________
consensus ATATATATAAAAAATAAAATGGATCGAGGATGGAGGATATGATGATATATTATTTCATAA
. : . : . : . : . : . :
rJMFF017G20- CAGCATCTTGATGATAGAGGCGGCGACAGCAGAGAGTTGGATTACATCCTTGTTAATCTC
JMFN019D03+ C
JMFN034I17+ C
____________________________________________________________
consensus CAGCATCTTGATGATAGAGGCGGCGACAGCAGAGAGTTGGATTACATCCTTGTTAATCTC
. : . : . : . : . : . :
rJMFF017G20- ATCGATGCCGGATCCCGAGTATTCCATTTCTTGATTCTGCGGCAGCTTAAACGCAGCCTC
JMFN019D03+ ATCGATGCCGGATCCCGAGTATTCCATTTCTTGATTCTGCGGCAGCTTAAACGCAGCCTC
JMFN018B09+ GCGGCAGCTTAAACGCAGCCTC
JMFN034I17+ ATCGATGCCGGATCCCGAGTATTCCATTTCTGATTTCTGCGGCAGCTTAAACGCAGCCTC
____________________________________________________________
consensus ATCGATGCCGGATCCCGAGTATTCCATTTCTTGATTCTGCGGCAGCTTAAACGCAGCCTC
. : . : . : . : . : . :
rJMFF017G20- GCAGCTCTCGGCCTCCAGCGCCGCATCCGCCATCCCATCCTCGGCGAACTTAGGGACTCC
JMFN019D03+ GCAGCTCTCGGCCTCCAGCGCCGCATCCGCCATCCCATCCTCGGCGAACTTAGGGACTCC
JMFN018B09+ GCAGCTCTCGGCCTCCAGCGCCGCATCCGCCATCCCATCCTCGGCGAACTTAGGGACTCC
JMFF027N01+ TCGGCGAACTTAGGGACTCC
JMFN034I17+ GCAGCTCTCGGCCTCCAGCGCCGCATCCGCCATCCCATCCTCGGCGAACTTAGGGACTCC
____________________________________________________________
consensus GCAGCTCTCGGCCTCCAGCGCCGCATCCGCCATCCCATCCTCGGCGAACTTAGGGACTCC
. : . : . : . : . : . :
rJMFF017G20- TCTCTTGAGAGCCGCCTCTGCTTCCGGCACGTCCGCATGCACCACGGTGTAGTAGTAGAT
JMFN019D03+ TCTCTTGAGAGCCGCCTCTGCTTCCGGCACGTCCGCATGCACCACGGCGTAGTAGTAGAT
JMFN018B09+ TCTCTTGAGAGCCGCCTCTGCTTCCGGCACGTCCGCATGCACCACGGCGTAGTAGTAGAT
JMFF027N01+ TCTCTTGAGAGCCGCCTCTGCTTCCGGCACGTCCGCATGCACCACGGCGTAGTAGTAGAT
JMFN034I17+ TCTCTTGAGAGCCGCCTCTGCTTCCGGCACGTCCGCATGCACCACGGCGTAGTAGTAGAT
JMFF017G20+ TTGAGAGCCGCCTCTGCTTCCGGCACGTCCGCATGCACCACGGTGTAGTAGTAGAT
____________________________________________________________
consensus TCTCTTGAGAGCCGCCTCTGCTTCCGGCACGTCCGCATGCACCACGGCGTAGTAGTAGAT
. : . : . : . : . : . :
rJMFF017G20- GTAACACTGGCTGAGGGGAAGCCTCCACTCCACGGGCTTCGACTTTACAAGCTCCCGAAT
JMFN019D03+ GTAACACTGGCTGAGGGGAAGCCTCCACTCCACGGGCTTCGACTTTTCAAGCTCCCGAAT
JMFN018B09+ GTAACACTGGCTGAGGGGAAGCCTCCACTCCACGGGCTTCGACTTTTCAAGCTCCCGAAT
JMFF027N01+ GTAACACTGGCTGAGGGGAAGCCTCCACTCCACGGGCTTCGACTTTTCAAGCTCCCGAAT
JMFF024E24+ CCACGGGCTTCGACTTTTCAAGCTCCCGAAT
JMFN034I17+ GTAACACTGGCTGAGGGGAAGCCTCCACTCCACGGGCTTCGACTTTTCAAGCTCCCGAAT
JMFF017G20+ GTAACACTGGCTGAGGGGAAGCCTCCACTCCACGGGCTTCGACTTTACAAGCTCCCGAAT
____________________________________________________________
consensus GTAACACTGGCTGAGGGGAAGCCTCCACTCCACGGGCTTCGACTTTTCAAGCTCCCGAAT
. : . : . : . : . : . :
rJMFF017G20- CGTTTCTATCATCTCCTCAGCCTTGGCCCTCACGGCGTCCACCATCACAAGCCCCAGAGT
JMFN019D03+ CGTTTCTATCATCTCCTCAGCCTTGGCCCTCACGGCGTCCACCATCACAAGCCCCAGAGT
JMFN018B09+ CGTTTCTATCATCTCCTCAGCCTTGGCCCTCACGGCGTCCACCATCACAAGCCCCAGAGT
JMFF027N01+ CGTTTCTATCATCTCCTCAGCCTTGGCCCTCACGGCGTCCACCATCACAAGCCCCAGAGT
JMFF024E24+ CGTTTCTATCATCTCCTCAGCCTTGGCCCTCACGGCGTCCACCATCACAAGCCCCAGAGT
JMFN034I17+ CGTTTCTATCATCTCCTCAGCCTTGGCCCTCACGGCGTCCACCATCACAAGCCCCAGAGT
JMFF017G20+ CGTTTCTATCATCTCCTCAGCCTTGGCCCTCACGGCGTCCACCATCACAAGCCCCAGAGT
____________________________________________________________
consensus CGTTTCTATCATCTCCTCAGCCTTGGCCCTCACGGCGTCCACCATCACAAGCCCCAGAGT
. : . : . : . : . : . :
rJMFF017G20- CTCGACGTTCACCGCGTTGGAGCTGGTTCGGGGGTCGGACGCCAGGACGGAGACGCAGAG
JMFN019D03+ CTCGACGTTCACCGCGTTGGAGCTGGTTCGGGGGTCGGACGCCAGGACGGAGACGCAGAG
JMFN018B09+ CTCGACGTTCACCGCGTTGGAGCTGGTTCGGGGGTCGGACGCCAGGACGGAGACGCAGAG
JMFF027N01+ CTCGACGTTCACCGCGTTGGAGCTGGTTCGGGGGTCGGACGCCAGGACGGAGACGCAGAG
JMFF024E24+ CTCGACGTTCACCGCGTTGGAGCTGGTTCGGGGGTCGGACGCCAGGACGGAGACGCAGAG
JMFN034I17+ CTCGACGTTCACCGCGTTGGAGCTGGTTCGGGGGTCGGACGCCAGGACGGAGACGCAGAG
JMFF017G20+ CTCGACGTTCACCGCGTTGGAGCTGGTTCGGGGGTCGGACGCCAGGACGGAGACGCAGAG
____________________________________________________________
consensus CTCGACGTTCACCGCGTTGGAGCTGGTTCGGGGGTCGGACGCCAGGACGGAGACGCAGAG
. : . : . : . : . : . :
rJMFF017G20- TGCGTAGTTGGGGGTGGTGTTGCAAGCGATGTTGATCAGGCCGCCGCCGCTGCTACTACC
JMFN019D03+ TGCGTAGTTGGGGGTGGTGTTGCAAGCGATGTTGATCAGGCCGCCGCCGCTGCTACTACC
JMFN018B09+ TGCGTAGTTGGGGGTGGTGTTGCAAGCGATGTTGATCAGGCCGCCGCCGCTGCTACTACC
JMFF027N01+ TGCGTAGTTGGGGGTGGTGTTGCAAGCGATGTTGATCAGGCCGCCGCCGCTGCTACTACC
JMFF024E24+ TGCGTAGTTGGGGGTGGTGTTGCAAGCGATGTTGATCAGGCCGCCGCCGCTGCTACTACC
JMFN034I17+ TGCGTAGTTGGGGGTGGTGTTGCAAGCGATGTTGATCAGGCCGCCGCCGCTGCTACTACC
JMFF017G20+ TGCGTAGTTGGGGGTGGTGTTGCAAGCGATGTTGATCAGGCCGCCGCCGCTGCTACTACC
____________________________________________________________
consensus TGCGTAGTTGGGGGTGGTGTTGCAAGCGATGTTGATCAGGCCGCCGCCGCTGCTACTACC
. : . : . : . : . : . :
rJMFF017G20- ATCATCATTGCCAACTTTTCCCCCATTTA
JMFN019D03+ ATCATCATTGCCAACTTTTCCCCCATTTAGGACAGAGGAAATAAGCATCATCGCTGTGAA
JMFN018B09+ ATCATCATTGCCAACTTTTCCCCCATTTAGGACAGAGGAAATAAGCATCATCGCTGTGAA
JMFF027N01+ ATCATCATTGCCAACTTTTCCCCCATTTAGGACAGAGGAAATAAGCA
JMFF024E24+ ATCATCATTGCCAACTTTTCCCCCATTTAGGACAGAGGAAATAAGCA
JMFN034I17+ ATCATCATTGCCAACTTTTCCCCCATTTAGGACAGAGGAAATAAGCATCATCGCTGTGAA
JMFF017G20+ ATCATCATTGCCAACTTTTCCCCCATTTAGGACAGAGGAAATAAGCATCATCGCTGTGAA
____________________________________________________________
consensus ATCATCATTGCCAACTTTTCCCCCATTTAGGACAGAGGAAATAAGCATCATCGCTGTGAA
. : . : . : . : . : . :
JMFN019D03+ TAAACTCTTCATCTTGCACTCAAATTATATTTGGTGTAGAGATCAGATCGATGAGAGCCG
JMFN018B09+ TAAACTCTTCATCTTGCACTCAAATTATATTTGGTGTAGAGATCAGATCGATGAGAGCCG
JMFN034I17+ TAAACTCTTCATCTTGCACTCAAATTATATTTGGTGTAGAGATCAGATCGATGAGAGCCG
JMFF017G20+ TAAACTCTTCATCTTGCACTCAAATTATATTTGGTGTAGAGATCAGATCGATGAGAGCCG
____________________________________________________________
consensus TAAACTCTTCATCTTGCACTCAAATTATATTTGGTGTAGAGATCAGATCGATGAGAGCCG
. : . : . : . : . : . :
JMFN019D03+ ATCCAATTAAGAAGAATGAAGAAGCTAAAATGAATTGAATTGAAGCCTTATGGCCTTTGA
JMFN018B09+ ATCCAATTAAGAAGAATGAAGAAGCTAAAATGAATTGAATTGAAGCCTTATGGCCTTTGA
JMFN034I17+ ATCCAATTAAGAAGAATGAAGAAGCTAAAATGAATTGAATTGAAGCCTTATGGCCTTTGA
JMFF017G20+ ATCCAATTAAGAAGAATGAAGAAGCTAAAATGAATTGAATTGAAGCCTTATGGCCTTTGA
____________________________________________________________
consensus ATCCAATTAAGAAGAATGAAGAAGCTAAAATGAATTGAATTGAAGCCTTATGGCCTTTGA
. : . : . : . : . : . :
JMFN019D03+ ATAATATTTTAGCTAGCTAGCTAGGTTGCT
JMFN018B09+ ATAATATTTTAGCTAGCTAGCTAGGTTGCT
JMFN034I17+ ATAATATTTTAGCTAGCTAGCTAGGTTGCT
JMFF017G20+ ATAATATTTTAGCTAGCTAGCTAGGTTGCTGTATAGACTAGAGCGCTTCTTAATTGCATT
____________________________________________________________
consensus ATAATATTTTAGCTAGCTAGCTAGGTTGCTGTATAGACTAGAGCGCTTCTTAATTGCATT