Contig 001643:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015O19Sequence549001643 (2)ref|XP_011083570.1|268PREDICTED: uncharacterized protein LOC105166052 [Sesamum indicum] ref|XP_0110835707005382 (2)ref|XP_009625706.1|256PREDICTED: uncharacterized protein LOC104116536 [Nicotiana tomentosiformis] ref|
JMFF017E09Sequence547001643 (2)ref|XP_006342058.1|3e-26PREDICTED: uncharacterized protein LOC102599988 isoform X1 [Solanum tuberosum] 762005382 (2)ref|XP_006342058.1|1e-88PREDICTED: uncharacterized protein LOC102599988 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF015O19+                                               TGAGTTGTTTACTATTTACAGGGT
                      ____________________________________________________________
consensus                                                 TGAGTTGTTTACTATTTACAGGGT
 
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JMFF015O19+           CAGAATCCAACTTTGAAAAGAATCGATCCAGGTTGTGCCATTGTGGATCTTTACACATAT
                      ____________________________________________________________
consensus             CAGAATCCAACTTTGAAAAGAATCGATCCAGGTTGTGCCATTGTGGATCTTTACACATAT
 
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JMFF015O19+           TTCCAAATCTGACCACCTCACGAGAAAAGACATCAAATTCCTCCCTTTTGTCAGCAGCAG
                      ____________________________________________________________
consensus             TTCCAAATCTGACCACCTCACGAGAAAAGACATCAAATTCCTCCCTTTTGTCAGCAGCAG
 
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JMFF015O19+           CTATAGCGAGTAGCTCTTTCGTATCCGTAGAGACCAACTCTCGCACTCCTTGTAAATGTA
                      ____________________________________________________________
consensus             CTATAGCGAGTAGCTCTTTCGTATCCGTAGAGACCAACTCTCGCACTCCTTGTAAATGTA
 
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JMFF015O19+           GAATTTCCTCTTTCAAATACTGGATACTTTCTTCAGATAGAGATTGCAATAAACTAGCAC
                      ____________________________________________________________
consensus             GAATTTCCTCTTTCAAATACTGGATACTTTCTTCAGATAGAGATTGCAATAAACTAGCAC
 
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JMFF015O19+           CTTTGGTGATAGTATTTGCAACCTCAAACGCCAGTATGGATATTCTGTTCCCTCTCGATC
JMFF017E09+                                                                CTCGATC
                      ____________________________________________________________
consensus             CTTTGGTGATAGTATTTGCAACCTCAAACGCCAGTATGGATATTCTGTTCCCTCTCGATC
 
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JMFF015O19+           CCGCGCCAGTAATAAACCCACTGTTGTTCAAATTCGTCATGCTGCTCCCTAAAGTGTCTA
JMFF017E09+           CCGCGCCAGTAATAAACCCACTGTTGTTCAAATTCGTCATGCTGCTCCCTAAAGTGTCTA
                      ____________________________________________________________
consensus             CCGCGCCAGTAATAAACCCACTGTTGTTCAAATTCGTCATGCTGCTCCCTAAAGTGTCTA
 
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JMFF015O19+           GAACTTCCACCGCCTTTTCAAGGCTCACTATGCCAGCTTTCCCAAT-AAAAGAGCTCCCG
JMFF017E09+           GAACTTCCACCGCCTTTTCAAGGCTCACTATGCCAGCTTTCCCAATAAAAAGAGCTCCCG
                      ____________________________________________________________
consensus             GAACTTCCACCGCCTTTTCAAGGCTCACTATGCCAGCTTTCCCAATAAAAAGAGCTCCCG
 
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JMFF015O19+           TGAGGCGACTTGTTAGCAACTGTCCTAATAGGCGTTGAGGGCTTCAACTCTCTAGAGATA
JMFF017E09+           TGAGGCGACTTGTTAGCAACTGTCCTAATAGGCGTTGAGGGCTTCAACTCTCTAGAGATA
                      ____________________________________________________________
consensus             TGAGGCGACTTGTTAGCAACTGTCCTAATAGGCGTTGAGGGCTTCAACTCTCTAGAGATA
 
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JMFF015O19+           GATAAATGCAAGTCACCAGAATCATATAGATTCTGCATCTTCTTAG              
JMFF017E09+           GATAAATGCAAGTCACCAGAATCATATAGATTCTGCATCTTCTTAGCAGCAGCACTTGCA
                      ____________________________________________________________
consensus             GATAAATGCAAGTCACCAGAATCATATAGATTCTGCATCTTCTTAGCAGCAGCACTTGCA
 
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JMFF017E09+           TTGGGATATTCATAAGAATCGGTATCATTATTCTCCTGCCCAGATTTTTTCACTGATTTT
                      ____________________________________________________________
consensus             TTGGGATATTCATAAGAATCGGTATCATTATTCTCCTGCCCAGATTTTTTCACTGATTTT
 
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JMFF017E09+           GGCTTTTTCGAACCCTTTGAGCTCCTCTCATGGCGACCCTCAGCTCTATTCCTAGCTGTC
                      ____________________________________________________________
consensus             GGCTTTTTCGAACCCTTTGAGCTCCTCTCATGGCGACCCTCAGCTCTATTCCTAGCTGTC
 
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JMFF017E09+           CCTCCTGCGCAAACTCCCCCCATTCCACTGCCCAATCAAAGTTTCTGCCTTTTCACCTTA
                      ____________________________________________________________
consensus             CCTCCTGCGCAAACTCCCCCCATTCCACTGCCCAATCAAAGTTTCTGCCTTTTCACCTTA
 
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JMFF017E09+           TGTGAGAGAAAAGCGAGACAATCAGCAAATTTGCAGAGAGAAGCTTTGGTGCAATTGGAA
                      ____________________________________________________________
consensus             TGTGAGAGAAAAGCGAGACAATCAGCAAATTTGCAGAGAGAAGCTTTGGTGCAATTGGAA
 
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JMFF017E09+           GAATGGAATAGTACAAAGTTCACACCGCGTTAAGCGACTAAAGAATGGCAAAATCTCTTC
                      ____________________________________________________________
consensus             GAATGGAATAGTACAAAGTTCACACCGCGTTAAGCGACTAAAGAATGGCAAAATCTCTTC