Contig 001641:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017B21Sequence561001641 (3)ref|XP_004230302.1|3e-44PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Solanum lyc671001641 (3)ref|XP_004230302.1|6e-44PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Solanum lyc
JMFF042O22Sequence625001641 (3)ref|XP_009789312.1|2e-72PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Nicotiana s604018063ref|XP_006344753.1|1e-21PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial-like [Solanu

Alignment

This contig is upended


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rJMFF017B21-                                                           TCGAGCCTCTT
                      ____________________________________________________________
consensus                                                              TCGAGCCTCTT
 
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rJMFF017B21-          TTTTATCCATGTTTGTGGTCTCAATGCAGTTCATACAGTATACGAGTATACAACAAACTA
                      ____________________________________________________________
consensus             TTTTATCCATGTTTGTGGTCTCAATGCAGTTCATACAGTATACGAGTATACAACAAACTA
 
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rJMFF017B21-          ACCTCCGATGAATTTTTATACCAATAGACAACAGGCAATCTATGAAACGGATGCTGACGA
                      ____________________________________________________________
consensus             ACCTCCGATGAATTTTTATACCAATAGACAACAGGCAATCTATGAAACGGATGCTGACGA
 
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rJMFF017B21-          GCACTTTGTCTGTGACATATTACTGTTTCACCATAAAGGAACTCTTGCAGCTACACCCAC
                      ____________________________________________________________
consensus             GCACTTTGTCTGTGACATATTACTGTTTCACCATAAAGGAACTCTTGCAGCTACACCCAC
 
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rJMFF017B21-          CCACTGCACTTGGATTTGTAGATACCTGAAAAGCAGAACGGATCAGCTCCTCTACATAAT
                      ____________________________________________________________
consensus             CCACTGCACTTGGATTTGTAGATACCTGAAAAGCAGAACGGATCAGCTCCTCTACATAAT
 
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JMFF042O22+                                  ATTGGCCTTATCATCTAGGGAAAAGTCATACTGAAAT
rJMFF017B21-          CAACAGTTGCACCTATCATCTACATTGGCCTTGTCATCTAGAGAGAATTCATACTGAAAC
JMFF017B21+                                  ATTGGCCTTGTCATCTAGAGAGAATTCATACTGAAAC
                      ____________________________________________________________
consensus             CAACAGTTGCACCTATCATCTACATTGGCCTTGTCATCTAGAGAGAATTCATACTGAAAC
 
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JMFF042O22+           CCAGAGCAGCCACCAGCTTCAATGCTTAAGCGTAGCATCTTTTTATTGGATTCACCAGCT
rJMFF017B21-          CCAGAGCAGCCACCAGCTTCAATGCTTAAGCGAAGCATCTTTTCCTTGGGTTCACTGACT
JMFF017B21+           CCAGAGCAGCCACCAGCTTCAATGCTTAAGCGAAGCATCTTTTCCTTGGGTTCACTGACT
                      ____________________________________________________________
consensus             CCAGAGCAGCCACCAGCTTCAATGCTTAAGCGAAGCATCTTTTCCTTGGGTTCACTGACT
 
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JMFF042O22+           TGCAGCTCCTTCATTCTCCGAACGCAACTGTCGGTCATAAAAACGGAAT           
rJMFF017B21-          TGCAGCTCCTTCATTCTCCGGACGCAATTCTCAGTCATGAAAACGGAATCATTCCGGGGT
JMFF017B21+           TGCAGCTCCTTCATTCTCCGGACGCAATTCTCAGTCATGAAAACGGAATCATTCCGGGGT
                      ____________________________________________________________
consensus             TGCAGCTCCTTCATTCTCCGGACGCAATTCTCAGTCATGAAAACGGAATCATTCCGGGGT
 
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rJMFF017B21-          GTGAATTCCGGCTGCTGCTCCGGTAGAGCAGAGGATGAAAAAGTTGTAGAACTAAGAATC
JMFF017B21+           GTGAATTCCGGCTGCTGCTCCGGTAGAGCAGAGGATGAAAAAGTTGTAGAACTAAGAATC
                      ____________________________________________________________
consensus             GTGAATTCCGGCTGCTGCTCCGGTAGAGCAGAGGATGAAAAAGTTGTAGAACTAAGAATC
 
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rJMFF017B21-          CTGTAGTTTTGGCGGATCCGGGAGGCGAAGAACGGGGCGGCCCGAAGAATCAGCGACCTT
JMFF017B21+           CTGTAGTTTTGGCGGATCCGGGAGGCGAAGAACGGGGCGGCCCGAAGAATCAGCGACCTT
                      ____________________________________________________________
consensus             CTGTAGTTTTGGCGGATCCGGGAGGCGAAGAACGGGGCGGCCCGAAGAATCAGCGACCTT
 
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rJMFF017B21-          GACGGCGTCTTCGTCGTCATGGCTTATGGATTACAGTATATCATCGTCTTAGTTCATCAG
JMFF017B21+           GACGGCGTCTTCGTCGTCATGGCTTATGGATTACAGTATATCATCGTCTTAGTTCATCAG
                      ____________________________________________________________
consensus             GACGGCGTCTTCGTCGTCATGGCTTATGGATTACAGTATATCATCGTCTTAGTTCATCAG
 
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rJMFF017B21-          AATGAGAGAGAAGAAGAGTAGCGTTTTGCAGTTGGTTTCGCCGCCNAATGAATGGTAACT
JMFF017B21+           AATGAGAGAGAAGAAGAGTAGCGTTTTGCAGTTGGTTTCGCCGCCAAATGAATGGTAACT
                      ____________________________________________________________
consensus             AATGAGAGAGAAGAAGAGTAGCGTTTTGCAGTTGGTTTCGCCGCCAAATGAATGGTAACT