Contig 001640:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016O13Sequence221001640 (3)264002975 (4)emb|CDP12153.1|9e-25unnamed protein product [Coffea canephora]
JMFF039J22Sequence230001640 (3)
JMSF051M17Sequence104001640 (3)729002975 (4)ref|XP_010910559.1|3e-110PREDICTED: long chain acyl-CoA synthetase 4-like [Elaeis guineensis]

Alignment

This contig is upended


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JMSF051M17+                              TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT
JMFF039J22+                     TCCTCTATNTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT
JMFF016O13+                              TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT
                      ____________________________________________________________
consensus                       TCCTCTATNTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT
 
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JMSF051M17+           ATAAACCAGAGAAAAATATGTGGGCGGGTGTGAAAGAAGTTGATGAGTTGCCAG      
JMFF039J22+           ATAAACCAGAGAAAAATATGTGGGCGGGTGTGAAAGAAGTTGATGAGTTGCCAGTAGCTA
JMFF016O13+           ATAAACCAGAGAAAAATATGTGGGCGGGTGTGAAAGAAGTTGATGAGTTGCCAGTAGCTA
                      ____________________________________________________________
consensus             ATAAACCAGAGAAAAATATGTGGGCGGGTGTGAAAGAAGTTGATGAGTTGCCAGTAGCTA
 
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JMFF039J22+           TTTGGCTATTTCTTCTTGTTCAAAGAGGCGTTTTGTTTTGACTTTCAGACCAGATTCGTT
JMFF016O13+           TTTGGCTATTTCTTCTTGTTCAAAGAGGCGTTTTGTTTTGACTTTCAGACCAGATTCGTT
                      ____________________________________________________________
consensus             TTTGGCTATTTCTTCTTGTTCAAAGAGGCGTTTTGTTTTGACTTTCAGACCAGATTCGTT
 
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JMFF039J22+           CGATCTGTTTAGTGGGTCTAGACTCTAGAAAGAGACTGTGAAGACCGCAAATTGTACAAT
JMFF016O13+           CGATCTGTTTAGTGGGTCTAGACTCTAGAAAGAGACTGTGAAGACCGCAAATTGTACAAT
                      ____________________________________________________________
consensus             CGATCTGTTTAGTGGGTCTAGACTCTAGAAAGAGACTGTGAAGACCGCAAATTGTACAAT