| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012I22 | Sequence | 588 | 001639 (6) | ref|XP_006471307.1| | 160 | PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis] | 801 | 001173 (5) | ref|XP_002532007.1| | 1e-22 | conserved hypothetical protein [Ricinus communis] gb|EEF30380.1| conserved hypot |
| JMFF016L12 | Sequence | 570 | 001639 (6) | ref|XP_006471307.1| | 156 | PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis] | 722 | 001173 (5) | ref|XP_002531759.1| | 2e-22 | conserved hypothetical protein [Ricinus communis] gb|EEF30615.1| conserved hypot |
| JMFF039N18 | Sequence | 582 | 001639 (6) | ref|XP_006471307.1| | 161 | PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis] | 721 | 001173 (5) | ref|XP_002531759.1| | 1e-22 | conserved hypothetical protein [Ricinus communis] gb|EEF30615.1| conserved hypot |
| JMFS088B08 | Sequence | 656 | 001639 (6) | ref|XP_006471307.1| | 174 | PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis] | |||||
| JMSF033B15 | Sequence | 633 | 001639 (6) | ref|XP_006485550.1| | 142 | PREDICTED: uncharacterized protein LOC102627687 [Citrus sinensis] | 746 | 001173 (5) | ref|XP_006470496.1| | 125 | PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis] |
| JMSF048L18 | Sequence | 694 | 001639 (6) | ref|XP_006471307.1| | 178 | PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis] | 801 | 001173 (5) | ref|XP_006470496.1| | 128 | PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMSF033B15+ TGAGCCTCGA
____________________________________________________________
consensus TGAGCCTCGA
. : . : . : . : . : . :
JMSF033B15+ GATGGTGTTGTTTTGCCGCCTTCTTTGAACAGAGTTATGAAAGAATGTCGAATTTACGTC
____________________________________________________________
consensus GATGGTGTTGTTTTGCCGCCTTCTTTGAACAGAGTTATGAAAGAATGTCGAATTTACGTC
. : . : . : . : . : . :
JMSF033B15+ CCCTTCTCTCAACCAAAATTGCTTGGCTCTTTGACGCCAGTAATCGTTTTGGTGTTGTAG
____________________________________________________________
consensus CCCTTCTCTCAACCAAAATTGCTTGGCTCTTTGACGCCAGTAATCGTTTTGGTGTTGTAG
. : . : . : . : . : . :
JMSF033B15+ AACCCTCAAGTACTCGTACTGGGCTTCCCTGAATAACATTAATCCCTTATGGTCCCTTTG
JMFS088B08+ GGTCCCTNTG
JMSF048L18+ TCAAGTACTCGTACTGGGCTTCCCTGAATAACATTAATCCCTTATGGTCCCTTTG
____________________________________________________________
consensus AACCCTCAAGTACTCGTACTGGGCTTCCCTGAATAACATTAATCCCTTATGGTCCCTTTG
. : . : . : . : . : . :
JMSF033B15+ ATGATTTAGAGACGCCATCTTGTTTCTCCAATACGTTATGCGCCTATTGAAATTGGTAGC
JMFF039N18+ AATTGGTAGC
JMFS088B08+ ATGATTTAGAGACGCCATCTTGTTTCTCCAATACGTTATGCGCCTATTGAAATTGGTAGC
JMSF048L18+ ATGATTNAGAGACGCCATCTTGTTTCTCCAATACGTTATGCGCCTATTGAAATTGGTAGC
____________________________________________________________
consensus ATGATTTAGAGACGCCATCTTGTTTCTCCAATACGTTATGCGCCTATTGAAATTGGTAGC
. : . : . : . : . : . :
JMSF033B15+ AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMFF039N18+ AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMFS088B08+ AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMSF048L18+ AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMFF012I22+ CCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
JMFF016L12+ GCCGAAGCTCCCAATTCGATCAATGAAGTC
____________________________________________________________
consensus AAAGCCTTTGCTCCAATCCCATATAGCTTTGCCGAAGCTCCCAATTCGATCAATGAAGTC
. : . : . : . : . : . :
JMSF033B15+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMFF039N18+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMFS088B08+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMSF048L18+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMFF012I22+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
JMFF016L12+ CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
____________________________________________________________
consensus CTGCCCTTGGTATCTTGCCCAACTTTCCTCCATAACATCTCTACATATTGACTCCCTTAG
. : . : . : . : . : . :
JMSF033B15+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMFF039N18+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMFS088B08+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMSF048L18+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMFF012I22+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
JMFF016L12+ CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
____________________________________________________________
consensus CCAGAGATTCTCAAATCGAAATCTCTTCTTCGCACAAAATTTCTCCTCCAGTAGTATCTG
. : . : . : . : . : . :
JMSF033B15+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMFF039N18+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMFS088B08+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMSF048L18+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMFF012I22+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
JMFF016L12+ AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
____________________________________________________________
consensus AAGATGGATAGGGATGTGGTCGCTCTTCGGGACAGGAATAGATGACGCCAAAGCTTGGGA
. : . : . : . : . : . :
JMSF033B15+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMFF039N18+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMFS088B08+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMSF048L18+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMFF012I22+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
JMFF016L12+ GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
____________________________________________________________
consensus GAATACTTCAGCCCAATGATCTGAAACCAACACCCTGTCTAGTTTTTCCTCAATCCAATT
. : . : . : . : . : . :
JMSF033B15+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMFF039N18+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMFS088B08+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMSF048L18+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMFF012I22+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
JMFF016L12+ TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
____________________________________________________________
consensus TGGTGTGCCGCTTGACTTTTCCCAGGTGAATTGATATCCTTTGAAAGGAAAATCCCGCGA
. : . : . : . : . : . :
JMSF033B15+ TCCGCTTGTTTCAACAGCCTCC
JMFF039N18+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
JMFS088B08+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
JMSF048L18+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
JMFF012I22+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
JMFF016L12+ TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
____________________________________________________________
consensus TCCGCTTGTTTCAACAGCCTCCTTGAAACCTTCAATCAGACGACTGGGTTGAGGGTTCCC
. : . : . : . : . : . :
JMFF039N18+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
JMFS088B08+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
JMSF048L18+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
JMFF012I22+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
JMFF016L12+ TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
____________________________________________________________
consensus TCCTCATTTCTCTTTCGGGCACAATATGTCGTTGAAGTCTCCCATTACCGCCCAAGGAAG
. : . : . : . : . : . :
JMFF039N18+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
JMFS088B08+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
JMSF048L18+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
JMFF012I22+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
JMFF016L12+ GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
____________________________________________________________
consensus GTAATTGAGAGTCGACAGTCTCTTCAAGAGACTCCATGACTCAGAACGTCGATCTCTCTC
. : . : . : . : . : . :
JMFF039N18+ TGGGACTCCATAAAAACCGGTAAAGCGCCAAC
JMFS088B08+ TGGGACTCCATAAAAACCGGTAAAGCGCCAACGG
JMSF048L18+ TGGGACTCCATAAAAACCGGTAAAGCGCCAACGG
JMFF012I22+ TGGGACTCCATAAAAACCGGTAAAGCGCCAACGGGAATCACCAAGGCTAAGACAGACTTC
JMFF016L12+ TGGGACTCCATAAAAACCGGTAAAGCGCCAACGGGAATCACCAAGGCTAAGACAGACTTC
____________________________________________________________
consensus TGGGACTCCATAAAAACCGGTAAAGCGCCAACGGGAATCACCAAGGCTAAGACAGACTTC