| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015M07 | Sequence | 583 | 001634 (5) | ref|XP_004233270.1| | 3e-64 | PREDICTED: allantoate deiminase [Solanum lycopersicum] | 460 | 014018 (4) | ref|XP_006365002.1| | 4e-84 | PREDICTED: allantoate deiminase-like [Solanum tuberosum] |
| JMFF034D17 | Sequence | 532 | 001634 (5) | ref|XP_004233270.1| | 8e-72 | PREDICTED: allantoate deiminase [Solanum lycopersicum] | 468 | 014018 (4) | ref|XP_006365002.1| | 2e-84 | PREDICTED: allantoate deiminase-like [Solanum tuberosum] |
| JMFF040M09 | Sequence | 439 | 001634 (5) | ref|XP_004233270.1| | 3e-36 | PREDICTED: allantoate deiminase [Solanum lycopersicum] | 581 | 014018 (4) | ref|XP_006365002.1| | 1e-97 | PREDICTED: allantoate deiminase-like [Solanum tuberosum] |
| JMFS153H01 | Sequence | 617 | 001634 (5) | ref|XP_004233270.1| | 6e-83 | PREDICTED: allantoate deiminase [Solanum lycopersicum] | |||||
| JMSF031G14 | Sequence | 612 | 001634 (5) | ref|XP_004233270.1| | 4e-71 | PREDICTED: allantoate deiminase [Solanum lycopersicum] | 781 | 014018 (4) | ref|XP_006365002.1| | 1e-132 | PREDICTED: allantoate deiminase-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS153H01+ CGCA
____________________________________________________________
consensus CGCA
. : . : . : . : . : . :
JMFF034D17+ GCTGAAAGCAATAACCTCC
JMFS153H01+ CTACCCAAGAAGGTCGACTGAAACCTAACTCCTTCCTCATCGCTGAAAGCAATAACCTCC
JMSF031G14+ GCTGAAAGCAATAACCTCC
____________________________________________________________
consensus CTACCCAAGAAGGTCGACTGAAACCTAACTCCTTCCTCATCGCTGAAAGCAATAACCTCC
. : . : . : . : . : . :
JMFF034D17+ ACCGGTTTGCTTAGTTTCTCTAATCGCCCGGTTGTTTTCAAAACCTTCAATGCAGATATC
JMFS153H01+ ACCGGTTTGCTTAGTTTCTCTAATCGCCCGGTTGTTTTCAAAACCTTCAATGCAGATATC
JMSF031G14+ ACCGGTTTGCTTAGTTTCTCTAATCGCCCGGTTGTTTTCAAAACCTTCAATGCAGATATC
JMFF015M07+ CTCTAATCGCCCGGTTGTTTTCAAAACCTTCAATGCAGATATC
____________________________________________________________
consensus ACCGGTTTGCTTAGTTTCTCTAATCGCCCGGTTGTTTTCAAAACCTTCAATGCAGATATC
. : . : . : . : . : . :
JMFF034D17+ GCGGTTATTATTCCAAGCGAGCCATCAAAATATCCAGCATCAATAACAGTGTCCAAATGA
JMFS153H01+ GCGGTTATTATTCCAAGCGAGCCATCAAAATATCCAGCATCAATAACAGTGTCCAAATGA
JMSF031G14+ GCGGTTATTATTCCAAGCGAGCCATCAAAATATCCAGCATCAATAACAGTGTCCAAATGA
JMFF015M07+ GCGGTTATTATTCCAAGCGAGCCATCAAAATATCCAGCATCAATAACAGTGTCCAAATGA
____________________________________________________________
consensus GCGGTTATTATTCCAAGCGAGCCATCAAAATATCCAGCATCAATAACAGTGTCCAAATGA
. : . : . : . : . : . :
JMFF034D17+ GAGCCAATTAACAAAGCCTTCCCACTTGGATTAATCCCCTCAATTCGACCATGAACATTT
JMFS153H01+ GAGCCAATTAACAAAGCCTTCCCACTTGGATTAATCCCCTCAATTCGACCATGAACATTT
JMSF031G14+ GAGCCAATTAACAAAGCCTTCCCACTTGGATTAATCCCCTCAATTCGACCATGAACATTT
JMFF040M09+ AATTCGACCATGAACATTT
JMFF015M07+ GAGCCAATTAACAAAGCCTTCCCACTTGGATTAATCCCCTCAATTCGACCATGAACATTT
____________________________________________________________
consensus GAGCCAATTAACAAAGCCTTCCCACTTGGATTAATCCCCTCAATTCGACCATGAACATTT
. : . : . : . : . : . :
JMFF034D17+ CCCATTTGGTCTATCCATGTTCTCAAACCCGCATCCTCCATCCATGAACGGATCAGGTTT
JMFS153H01+ CCCATTTGGTCTATCCATGTTCTCAAACCCGCATCCTCCATCCATGAACGGATCAGGTTT
JMSF031G14+ CCCATTTGGTCTATCCATGTTCTCAAACCCGCATCCTCCATCCATGAACGGATCAGGTTT
JMFF040M09+ CCCATTTGGTCTATCCATGTTCTCAAACCCGCATCCTCCATCCATGAACGGATCAGGTTT
JMFF015M07+ CCCATTTGGTCTATCCATGTTCTCAAACCCGCATCCTCCATCCATGAACGGATCAGGTTT
____________________________________________________________
consensus CCCATTTGGTCTATCCATGTTCTCAAACCCGCATCCTCCATCCATGAACGGATCAGGTTT
. : . : . : . : . : . :
JMFF034D17+ CCAGCTCTTACCGAAGCTGGGCTTTGGAAAGTCCTCTCTAGATAGTTATCCGCATCACTA
JMFS153H01+ CCAGCTCTTACCGAAGCTGGGCTTTGGAAAGTCCTCTCTAGATAGTTATCCGCATCACTA
JMSF031G14+ CCAGCTCTTACCGAAGCTGGGCTTTGGAAAGTCCTCTCTAGATAGTTATCCGCATCACTA
JMFF040M09+ CCAGCTCTTACCGAAGCTGGGCTTTGGAAAGTCCTCTCTAGATAGTTATCCGCATCACTA
JMFF015M07+ CCAGCTCTTACCGAAGCTGGGCTTTGGAAAGTCCTCTCTAGATAGTTATCCGCATCACTA
____________________________________________________________
consensus CCAGCTCTTACCGAAGCTGGGCTTTGGAAAGTCCTCTCTAGATAGTTATCCGCATCACTA
. : . : . : . : . : . :
JMFF034D17+ ACCTTTCCAAGCTCATATAGCCTTGACACAGCCTCCTCCTTTAGGATTTGTGGAAACAAA
JMFS153H01+ ACCTTTCCAAGCTCATATAGCCTTGACACAGCCTCCTCCTTTAGGATTTGTGGAAACAAA
JMSF031G14+ ACCTTTCCAAGCTCATATAGCCTTGACACAGCCTCCTCCTTTAGGATTTGTGGAAACAAA
JMFF040M09+ ACCTTTCCAAGCTCATATAGCCTTGACACAGCCTCCTCCTTTAGGATTTGTGGAAACAAA
JMFF015M07+ ACCTTTCCAAGCTCATATAGCCTTGACACAGCCTCCTCCTTTAGGATTTGTGGAAACAAA
____________________________________________________________
consensus ACCTTTCCAAGCTCATATAGCCTTGACACAGCCTCCTCCTTTAGGATTTGTGGAAACAAA
. : . : . : . : . : . :
JMFF034D17+ TCATATTTTGTGCCTACTCCATTTTCAGAACCAGAAAATGCGATAACTGGACACAAAAAG
JMFS153H01+ TCATATTTTGTGCCTACTCCATTTTCAGAACCAGAAAATGCGATAACTGGACACAAAAAG
JMSF031G14+ TCATATTTTGTGCCTACTCCATTTTCAGAACCAGAAAATGCGATAACTGGACACAAAAAG
JMFF040M09+ TCATATTTTGTGCCTACTCCATTTTCAGAACCAGAAAATGCGATAACTGGACACAAAAAG
JMFF015M07+ TCATATTTTGTGCCTACTCCATTTTCAGAACCAGAAAATGCGATAACTGGACACAAAAAG
____________________________________________________________
consensus TCATATTTTGTGCCTACTCCATTTTCAGAACCAGAAAATGCGATAACTGGACACAAAAAG
. : . : . : . : . : . :
JMFF034D17+ AGCAGGAAGAAGGGAAAGATTGAGATGAGGATTGCATGGGGTTTGAGAGACGTGTGGGTT
JMFS153H01+ AGCAGGAAGAAGGGAAAGATTGAGATGAGGATTGCATGGGGTTTGAGAGACGTGTGGGTT
JMSF031G14+ AGCAGGAAGAAGGGAAAGATTGAGATGAGGATTGCATGGGGTTTGAGAGACGTGTGGGTT
JMFF040M09+ AGCAGGAAGAAGGGAAAGATTGAGATGAGGATTGCATGGGGTTTGAGAGACGTGTGGGTT
JMFF015M07+ AGCAGGAAGAAGGGAAAGATTGAGATGAGGATTGCATGGGGTTTGAGAGACGTGTGGGTT
____________________________________________________________
consensus AGCAGGAAGAAGGGAAAGATTGAGATGAGGATTGCATGGGGTTTGAGAGACGTGTGGGTT
. : . : . : . : . : . :
JMFF034D17+ TGGTGAGAAAAGGAGGAAGAATGCGTCGCCAT
JMFS153H01+ TGGTGAGAAAAGGAGGAAGAATGCGTCGCCATGGGCATGGAGGGTGAGCAAAGCATGTGG
JMSF031G14+ TGGTGAGAAAAGGAGGAAGAATGCGTCGCCATGGGCATGGAGGGTGAGCAAAGCATGTGG
JMFF040M09+ TGGTGAGAAAAGGAGGAAGAATGCGTCGCCATGGGCATGGAGGGTGAGCAAAGCATGTGG
JMFF015M07+ TGGTGAGAAAAGGAGGAAGAATGCGTCGCCATGGGCATGGAGGGTGAGCAAAGCATGTGG
____________________________________________________________
consensus TGGTGAGAAAAGGAGGAAGAATGCGTCGCCATGGGCATGGAGGGTGAGCAAAGCATGTGG
. : . : . : . : . : . :
JMFS153H01+ AGAAGAGAAGCCA
JMSF031G14+ AGAAGAGAAGCCAGAAAAGTTGGCCACGGCACTTGAACAAAACTTCTCCCAC
JMFF040M09+ AGAAGAGAAGCCAGAAAAGTTGGCCACGGCACTTGAACAAAACTTCTCCCAC
JMFF015M07+ AGAAGAGAAGCCAGAAAAGTTGGCCACGGCACTTGAACAAAACTTCTCCCACTCAAAACC
____________________________________________________________
consensus AGAAGAGAAGCCAGAAAAGTTGGCCACGGCACTTGAACAAAACTTCTCCCACTCAAAACC