| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015L08 | Sequence | 610 | 001633 (7) | 660 | 012766 (6) | ref|XP_009603675.1| | 1e-99 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] | |||
| JMFF036H11 | Sequence | 611 | 001633 (7) | 512 | 012766 (6) | ref|XP_009603675.1| | 5e-63 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] | |||
| JMFF048K24 | Sequence | 411 | 001633 (7) | 197 | 012766 (6) | ref|XP_009603675.1| | 6e-05 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] | |||
| JMSF018H13 | Sequence | 574 | 001633 (7) | 687 | 012766 (6) | ref|XP_009603675.1| | 8e-99 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] | |||
| JMSF026M11 | Sequence | 206 | 001633 (7) | 706 | 012766 (6) | ref|XP_009603675.1| | 3e-102 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] | |||
| JMSF046A09 | Sequence | 687 | 001633 (7) | ref|XP_010109124.1| | 2e-19 | hypothetical protein L484_000282 [Morus notabilis] gb|EXC55735.1| hypothetical p | 611 | 012111 (2) | |||
| JMSF048I21 | Sequence | 706 | 001633 (7) | ref|XP_010109124.1| | 1e-43 | hypothetical protein L484_000282 [Morus notabilis] gb|EXC55735.1| hypothetical p | 720 | 012766 (6) | ref|XP_009603675.1| | 7e-81 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF048I21+ A
____________________________________________________________
consensus A
. : . : . : . : . : . :
JMSF048I21+ TANCAGCACCCCTGGCCAAATACAGAGTCATGTGACTGGTGAGATTGAAAGGTCCAGTTA
____________________________________________________________
consensus TANCAGCACCCCTGGCCAAATACAGAGTCATGTGACTGGTGAGATTGAAAGGTCCAGTTA
. : . : . : . : . : . :
JMSF048I21+ AATACACCCCAGGAGGAATGTAAAGAAGAGTGCCACCTCTCCTCCTCAAATGCTCTATTC
JMSF046A09+ CTCAAATGCTCTATTC
____________________________________________________________
consensus AATACACCCCAGGAGGAATGTAAAGAAGAGTGCCACCTCTCCTCCTCAAATGCTCTATTC
. : . : . : . : . : . :
JMSF048I21+ GATAAATTGCTTCCCTGAAAGCATTAGTATTTAGGGTGCGCCCATCTCCGACGCCCCCAA
JMSF046A09+ GATAAATTGCTTCCCTGAAAGCATTAGTATTTAGGGTGCGCCCATCTCCGACGCCCCCAA
____________________________________________________________
consensus GATAAATTGCTTCCCTGAAAGCATTAGTATTTAGGGTGCGCCCATCTCCGACGCCCCCAA
. : . : . : . : . : . :
JMSF048I21+ AGTCCTTTATCGATATCTTGTCATTCCGGTAACTCATCGGAACTATCCACGAGCATGTTT
JMSF046A09+ AGTCCTTTATCGATATCTTGTCATTCCGGTAACTCATCGGAACTATCCACGAGCATGTTT
JMSF018H13+ ATCCACGAGCATGTTT
____________________________________________________________
consensus AGTCCTTTATCGATATCTTGTCATTCCGGTAACTCATCGGAACTATCCACGAGCATGTTT
. : . : . : . : . : . :
JMSF048I21+ CCCACTCGCCCGCCGCCGCCGCCGAGCGTAACAGAAACACCACCGCCATTGACCAGAGGG
JMSF046A09+ CCCACTCGCCCGCCGCCGCCGCCGAGCGTAACAGAAACACCACCGCCATTGACCAGAGGG
JMSF018H13+ CCCACTCGCCCGCCGCCGCCGCCGAGCGTAACAGAAACACCACCGCCATTGACCAGAGGG
JMFF036H11+ TGACCAGAGGG
JMFF048K24+ CAGAGGG
JMFF015L08+ GACCAGAGGG
____________________________________________________________
consensus CCCACTCGCCCGCCGCCGCCGCCGAGCGTAACAGAAACACCACCGCCATTGACCAGAGGG
. : . : . : . : . : . :
JMSF048I21+ ATATTGTTTGGAAAAATGGAGACATAATTTTGTTCAGGGCTTTGTCAGAGAAGAATACTT
JMSF046A09+ ATATTGTTTGGAAAAATGGAGACATAATTTTGTTCAGGGCTTTGTCAGAGAAGAATACTT
JMSF018H13+ ATATTGTTTGGAAAAATGGAGACATAATTTTGTTCAGGGCTTTGTCAGAGAAGAATACTT
JMFF036H11+ ATATTGTTTGGAAAAATGGAGACATAATTTTGTTCAGGGCTTTGTCAGAGAAGAATACTT
JMFF048K24+ ATATTGTTTGGAAAAATGGAGACATAATTTTGTTCAGGGCTTTGTCAGAGAAGAATACTT
JMFF015L08+ ATATTGTTTGGAAAAATGGAGACATAATTTTGTTCAGGGCTTTGTCAGAGAAGAATACTT
____________________________________________________________
consensus ATATTGTTTGGAAAAATGGAGACATAATTTTGTTCAGGGCTTTGTCAGAGAAGAATACTT
. : . : . : . : . : . :
JMSF048I21+ GTTAGGCGTATGAGTCTCGAAAGAAAATGACAGAAAGTTGGAATTTTTTTCTCGGTTTAT
JMSF046A09+ GTTAGGCGTATGAGTCTCGAAAGAAAATGACAGAAAGTTGGAATTTTTTTCTCGGTTTAT
JMSF018H13+ GTTAGGCGTATGAGTCTCGAAAGAAAATGACAGAAAGTTGGAATTTTTTTCTCGGTTTAT
JMFF036H11+ GTTAGGCGTATGAGTCTCGAAAGAAAATGACAGAAAGTTGGAATTTTTTTCTCGGTTTAT
JMFF048K24+ GTTAGGCGTATGAGTCTCGAAAGAAAATGACAGAAAGTTGGAATTTTTTTCTCGGTTTAT
JMFF015L08+ GTTAGGCGTATGAGTCTCGAAAGAAAATGACAGAAAGTTGGAATTTTTTTCTCGGTTTAT
____________________________________________________________
consensus GTTAGGCGTATGAGTCTCGAAAGAAAATGACAGAAAGTTGGAATTTTTTTCTCGGTTTAT
. : . : . : . : . : . :
JMSF048I21+ TGGTGGGTTTGTAATCAAATGAAAGAATGTGCGGTTAAAAGAAAAAAAGCATAAATGCAT
JMSF046A09+ TGGTGGGTTTGTAATCAAATGAAAGAATGTGCGGTTAAAAGAAAAAAAGCATAAATGCAT
JMSF018H13+ TGGTGGGTTTGTAATCAAATGAAAGAATGTGCGGTTAAAAGAAAAAAAGCATAAATGCAT
JMFF036H11+ TGGTGGGTTTGTAATCAAATGAAAGAATGTGCGGTTAAAAGAAAAAAAGCATAAATGCAT
JMFF048K24+ TGGTGGGTTTGTAATCAAATGAAAGAATGTGCGGTTAAAAGAAAAAAAGCATAAATGCAT
JMFF015L08+ TGGTGGGTTTGTAATCAAATGAAAGAATGTGCGGTTAAAAGAAAAAAAGCATAAATGCAT
____________________________________________________________
consensus TGGTGGGTTTGTAATCAAATGAAAGAATGTGCGGTTAAAAGAAAAAAAGCATAAATGCAT
. : . : . : . : . : . :
JMSF048I21+ GGAAAGAAGAGTGATTGAAATGTGTAAAGGTAATGTATAAGCTCCAAGGGAAAAAGTCCA
JMSF046A09+ GGAAAGAAGAGTGATTGAAATGTGTAAAGGTAATGTATAAGCTCCAAGGGAAAAAGTCCA
JMSF018H13+ GGAAAGAAGAGTGATTGAAATGTGTAAAGGTAATGTATAAGCTCCAAGGGAAAAAGTCCA
JMFF036H11+ GGAAAGAAGAGTGATTGAAATGTGTAAAGGTAATGTATAAGCTCCAAGGGAAAAAGTCCA
JMFF048K24+ GGAAAGAAGAGTGATTGAAATGTGTAAAGGTAATGTATAAGCTCCAAGGGAAAAAGTCCA
JMFF015L08+ GGAAAGAAGAGTGATTGAAATGTGTAAAGGTAATGTATAAGCTCCAAGGGAAAAAGTCCA
____________________________________________________________
consensus GGAAAGAAGAGTGATTGAAATGTGTAAAGGTAATGTATAAGCTCCAAGGGAAAAAGTCCA
. : . : . : . : . : . :
JMSF048I21+ AGCAAAGATATATTCAGTGCGAACGAACTGCGGCAAACAGTGGAAGATAGCATAAATAAA
JMSF046A09+ AGCAAAGATATATTCAGTGCGAACGAACTGCGGCAAACAGTGGAAGATAGCATAAATAAA
JMSF018H13+ AGCAAAGATATATTCAGTGCGAACGAACTGCGGCAAACAGTGGAAGATAGCATAAATAAA
JMFF036H11+ AGCAAAGATATATTCAGTGCGAACGAACTGCGGCAAACAGTGGAAGATAGCATAAATAAA
JMFF048K24+ AGCAAAGATATATTCAGTGCGAACGAACTGCGGCAAACAGTGGAAGATAGCATAAATAAA
JMSF026M11+ TGCGGCAAACAGTGGAAGATAGCATAAATAAA
JMFF015L08+ AGCAAAGATATATTCAGTGCGAACGAACTGCGGCAAACAGTGGAAGATAGCATAAATAAA
____________________________________________________________
consensus AGCAAAGATATATTCAGTGCGAACGAACTGCGGCAAACAGTGGAAGATAGCATAAATAAA
. : . : . : . : . : . :
JMSF048I21+ GAATTCAGAAAGTGAAAATGGAAGTGAAATGAAGAAGACAATGGAAAAAGGGTTGATTCT
JMSF046A09+ GAATTCAGAAAGTGAAAATGGAAGTGAAATGAAGAAGACAATGGAAAAAGGGTTGATTCT
JMSF018H13+ GAATTCAGAAAGTGAAAATGGAAGTGAAATGAAGAAGACAATGGAAAAAGGGTTGATTCT
JMFF036H11+ GAATTCAGAAAGTGAAAATGGAAGTGAAATGAAGAAGACAATGGAAAAAGGGTTGATTCT
JMFF048K24+ GAATTCAGATAGTGAAAATGGAAGTGAAATGAAGAAGACAATGGAAAAAGGGTTGATTCT
JMSF026M11+ GAATTCAGAAAGTGAAAATGGAAGTGAAATGAAGAAGACAATGGAAAAAGGGNTGATTCT
JMFF015L08+ GAATTCAGAAAGTGAAAATGGAAGTGAAATGAAGAAGACAATGGAAAAAGGGTTGATTCT
____________________________________________________________
consensus GAATTCAGAAAGTGAAAATGGAAGTGAAATGAAGAAGACAATGGAAAAAGGGTTGATTCT
. : . : . : . : . : . :
JMSF048I21+ TGAGATTCAGATGCTAATAGCAGGAAAATGGAGAATCTATCAAT
JMSF046A09+ TGAGATTCAGATGCTAATAGCAGGAAAATGGAGAATCTATCAATGCAGAAATTTGACCGC
JMSF018H13+ TGAGATTCAGATGCTAATAGCAGGAAAATGGAGAATCTATCAATGCAGAAATTTGACCGC
JMFF036H11+ TGAGATTCAGATGCTAATAGCAGGAAAATGGAGAATCTATCAATGCAGAAATTTGACCGC
JMFF048K24+ TGAGATTCAGATGCTAATAGCAGGAAAATGGAGAATCTATCAAT
JMSF026M11+ TGTGATTCAGATNCTNATAGCAGGAAAATGGAGAATCTATCAATGCAGAAATTTGACCGC
JMFF015L08+ TGAGATTCAGATGCTAATAGCAGGAAAATGGAGAATCTATCAATGCAGAAATTTGACCGC
____________________________________________________________
consensus TGAGATTCAGATGCTAATAGCAGGAAAATGGAGAATCTATCAATGCAGAAATTTGACCGC
. : . : . : . : . : . :
JMSF046A09+ AAGTGATTGTCTTTTGCTCAGGGAGAGAGAGAGAGAGCCGATGGGTGCGATGTTGATAAC
JMSF018H13+ AAGTGATTGTCTTTTGCTCAGGGAGAGAGAGAGAGAGCCGATGGGTGCGATGTTGATAAC
JMFF036H11+ AAGTGATTGTCTTTTGCTCAGGGAGAGAGAGAGAGAGCCGATGGGTGCGATGTTGATAAC
JMSF026M11+ AAGTGATTGTCTTTTGCTCAGGGAGAGNGAGAGAGAGCCGATGGGTGCGATGTT
JMFF015L08+ AAGTGATTGTCTTTTGCTCAGGGAGAGAGAGAGAGAGCCGATGGGTGCGATGTTGATAAC
____________________________________________________________
consensus AAGTGATTGTCTTTTGCTCAGGGAGAGAGAGAGAGAGCCGATGGGTGCGATGTTGATAAC
. : . : . : . : . : . :
JMSF046A09+ AAGGCCGAGT
JMSF018H13+ AAGGCCGAGT
JMFF036H11+ AAGGCCGAGTGGCACACAACATTGTCAAGCATGTAAAGTATAGTACGTACTGAGTGAGAA
JMFF015L08+ AAGGCCGAGTGGCACACAACATTGTCAAGCATGTAAAGTATAGTACGTACTGAGTGAGAA
____________________________________________________________
consensus AAGGCCGAGTGGCACACAACATTGTCAAGCATGTAAAGTATAGTACGTACTGAGTGAGAA
. : . : . : . : . : . :
JMFF036H11+ AGCAACGGTTTTAGATTTTATATGATTTTTTTTGGGTTAACTTAGATTTTCCGACTTAGC
JMFF015L08+ AGCAACGGTTTTAGATTTTATATGATTTTTTTTGGGTTAACTTAGATTTTCCGACTTAGC
____________________________________________________________
consensus AGCAACGGTTTTAGATTTTATATGATTTTTTTTGGGTTAACTTAGATTTTCCGACTTAGC