Contig 001621:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013O01Sequence522001621 (4)emb|CDP09942.1|1e-04unnamed protein product [Coffea canephora]
JMFF037A01Sequence455006036 (4)563001621 (4)emb|CDP09942.1|2e-14unnamed protein product [Coffea canephora]
JMFS140G01Sequence566001621 (4)emb|CDP09942.1|1e-17unnamed protein product [Coffea canephora]
JMSF007L04Sequence341001621 (4)767013888 (5)ref|XP_009343062.1|6e-74PREDICTED: scarecrow-like protein 6 [Pyrus x bretschneideri]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF037A01+ ATTGAAAGAAAAGGGAGANCCAGAAATGGGAATAACAGAAGAA
JMFS140G01+ ATGGGAATAACAGAAGAA
                      ____________________________________________________________
consensus ATTGAAAGAAAAGGGAGANCCAGAAATGGGAATAACAGAAGAA
 
. : . : . : . : . : . :
rJMFF037A01+ CTCACATAATTATNTGAAGCAATTAGGGCACCAAATCCAGTAGTAGTTTGATCAGCATCA
JMFS140G01+ CTCACATAATTATCTGAAGCAATTAGGGCACCAAATCCAGTAGTAGTTTGATCAGCATCA
                      ____________________________________________________________
consensus CTCACATAATTATCTGAAGCAATTAGGGCACCAAATCCAGTAGTAGTTTGATCAGCATCA
 
. : . : . : . : . : . :
rJMFF037A01+ CCCAAACCCGCATTGCCCTGGATCTCATGATGCTTGAAGCTGAATGAGGGATCCTCAAAC
JMFS140G01+ CCCAAACCCGCATTGCCCTGGATCTCATGATGCTTGAAGCTGAATGAGGGATCCTCAAAC
                      ____________________________________________________________
consensus CCCAAACCCGCATTGCCCTGGATCTCATGATGCTTGAAGCTGAATGAGGGATCCTCAAAC
 
. : . : . : . : . : . :
rJMFF037A01+ TCCGCGCCGGAAACCCACCGGAGAATAGACTGGTCGGAACCCCCACCCCCAGATTCAGAC
JMFS140G01+ TCCGCGCCGGAAACCCACCGGAGAATAGACTGGTCGGAACCCCCACCCCCAGATTCAGAC
                      ____________________________________________________________
consensus TCCGCGCCGGAAACCCACCGGAGAATAGACTGGTCGGAACCCCCACCCCCAGATTCAGAC
 
. : . : . : . : . : . :
rJMFF037A01+ AAGAAACACTCCCAATCTTCCAATCCAAGACCAAATTTTTCAAAAGGAACAAGAGGCTGC
JMFS140G01+ AAGAAACACTCCCAATCTTCCAATCCAAGACCAAATTTTTCAAAAGGAACAAGAGGCTGC
JMFF013O01+ TCCAATCCAAGACCAAATTTTTCAAAAGGAACAAGAGGNTGC
                      ____________________________________________________________
consensus AAGAAACACTCCCAATCTTCCAATCCAAGACCAAATTTTTCAAAAGGAACAAGAGGCTGC
 
. : . : . : . : . : . :
rJMFF037A01+ TATTCCCCCACCACCCACTCCTCCTTCGGCCCGTCGCCCACGGCGGCCGGAGCGGCGGCG
JMFS140G01+ AATTCCCCCACCACCCACTCCTCCTTCGGCCCGTCGCCCACGGCGGCCGGAGCGGCGGCG
JMFF013O01+ AATTCCCCCACCACCCACTCCTCCTTCGGCCCGTCGCCCACGGCGGCCGGAGCGGCGGCG
                      ____________________________________________________________
consensus AATTCCCCCACCACCCACTCCTCCTTCGGCCCGTCGCCCACGGCGGCCGGAGCGGCGGCG
 
. : . : . : . : . : . :
rJMFF037A01+ TCCTTCACCGCCGTGCCGCCAAAAGAGGAAGAGGAAGCGGATGTGGAAGTGGAAGGGCTT
JMFS140G01+ TCCTTCACCGCCGTGCCGCCAAAAGAGGAAGAGGAAGCGGATGTGGAAGTGGAAGGGCTT
JMFF013O01+ TCCTTCACCGCCGTGCCGCCAAAAGAGGAAGAGGAAGCGGATGTGGAAGTGGAAGGGCTT
                      ____________________________________________________________
consensus TCCTTCACCGCCGTGCCGCCAAAAGAGGAAGAGGAAGCGGATGTGGAAGTGGAAGGGCTT
 
. : . : . : . : . : . :
rJMFF037A01+ GGGCTCCTCCTCTTGTCCAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTC
JMFS140G01+ GGGCTCCTCCTCTTGTCCAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTT
JMSF007L04+ CAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTC
JMFF013O01+ GGGCTCCTCCTCTTGTCCAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTC
                      ____________________________________________________________
consensus GGGCTCCTCCTCTTGTCCAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTC
 
. : . : . : . : . : . :
rJMFF037A01+ TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
JMFS140G01+ TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
JMSF007L04+ TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
JMFF013O01+ TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
                      ____________________________________________________________
consensus TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
 
. : . : . : . : . : . :
rJMFF037A01+ ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCA
JMFS140G01+ ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCATTCCTATCATC
JMSF007L04+ ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCATTCCTATCATCCATATCACC
JMFF013O01+ ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCATTCCTATCATCCATATCACC
                      ____________________________________________________________
consensus ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCATTCCTATCATCCATATCACC
 
. : . : . : . : . : . :
JMSF007L04+ ATTTCAGCTCCATATCTGCACCTCAAAAACTCTGTACAACAACAACAACACTACCCTTTC
JMFF013O01+ ATTTCAGCTCCATATCTGCACCTCAAAAACTCTGTACAACAACAACAACACTACCCTTTC
                      ____________________________________________________________
consensus ATTTCAGCTCCATATCTGCACCTCAAAAACTCTGTACAACAACAACAACACTACCCTTTC
 
. : . : . : . : . : . :
JMSF007L04+ TTCTTCTTCTTCTTCTCTGTGGCTCTCTTTTTATGTGGCTACTGTGTAATCTCTAGTCCC
JMFF013O01+ TTCTTCTTCTTCTTCTCTGTGGCTCTCTTTTTATGTGGCTACTGTGTAATCTCTAGTCCC
                      ____________________________________________________________
consensus TTCTTCTTCTTCTTCTCTGTGGCTCTCTTTTTATGTGGCTACTGTGTAATCTCTAGTCCC
 
. : . : . : . : . : . :
JMSF007L04+ TAGGCTTTAGGGGCCGGTGCTACTGTGAAGTATGAATCCCCCCTTGGGCCTTCCC
JMFF013O01+ TAGGCTTTAGGGGCCGGTGCTACTGTGAAGTATGAATCCCCCCTTGGGCCTTCCCTCACT
                      ____________________________________________________________
consensus TAGGCTTTAGGGGCCGGTGCTACTGTGAAGTATGAATCCCCCCTTGGGCCTTCCCTCACT