Contig 001621:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013O01Sequence522001621 (4)emb|CDP09942.1|1e-04unnamed protein product [Coffea canephora]
JMFF037A01Sequence455006036 (4)563001621 (4)emb|CDP09942.1|2e-14unnamed protein product [Coffea canephora]
JMFS140G01Sequence566001621 (4)emb|CDP09942.1|1e-17unnamed protein product [Coffea canephora]
JMSF007L04Sequence341001621 (4)767013888 (5)ref|XP_009343062.1|6e-74PREDICTED: scarecrow-like protein 6 [Pyrus x bretschneideri]

Alignment

This contig is upended


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rJMFF037A01+                           ATTGAAAGAAAAGGGAGANCCAGAAATGGGAATAACAGAAGAA
JMFS140G01+                                                     ATGGGAATAACAGAAGAA
                      ____________________________________________________________
consensus                              ATTGAAAGAAAAGGGAGANCCAGAAATGGGAATAACAGAAGAA
 
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rJMFF037A01+          CTCACATAATTATNTGAAGCAATTAGGGCACCAAATCCAGTAGTAGTTTGATCAGCATCA
JMFS140G01+           CTCACATAATTATCTGAAGCAATTAGGGCACCAAATCCAGTAGTAGTTTGATCAGCATCA
                      ____________________________________________________________
consensus             CTCACATAATTATCTGAAGCAATTAGGGCACCAAATCCAGTAGTAGTTTGATCAGCATCA
 
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rJMFF037A01+          CCCAAACCCGCATTGCCCTGGATCTCATGATGCTTGAAGCTGAATGAGGGATCCTCAAAC
JMFS140G01+           CCCAAACCCGCATTGCCCTGGATCTCATGATGCTTGAAGCTGAATGAGGGATCCTCAAAC
                      ____________________________________________________________
consensus             CCCAAACCCGCATTGCCCTGGATCTCATGATGCTTGAAGCTGAATGAGGGATCCTCAAAC
 
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rJMFF037A01+          TCCGCGCCGGAAACCCACCGGAGAATAGACTGGTCGGAACCCCCACCCCCAGATTCAGAC
JMFS140G01+           TCCGCGCCGGAAACCCACCGGAGAATAGACTGGTCGGAACCCCCACCCCCAGATTCAGAC
                      ____________________________________________________________
consensus             TCCGCGCCGGAAACCCACCGGAGAATAGACTGGTCGGAACCCCCACCCCCAGATTCAGAC
 
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rJMFF037A01+          AAGAAACACTCCCAATCTTCCAATCCAAGACCAAATTTTTCAAAAGGAACAAGAGGCTGC
JMFS140G01+           AAGAAACACTCCCAATCTTCCAATCCAAGACCAAATTTTTCAAAAGGAACAAGAGGCTGC
JMFF013O01+                             TCCAATCCAAGACCAAATTTTTCAAAAGGAACAAGAGGNTGC
                      ____________________________________________________________
consensus             AAGAAACACTCCCAATCTTCCAATCCAAGACCAAATTTTTCAAAAGGAACAAGAGGCTGC
 
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rJMFF037A01+          TATTCCCCCACCACCCACTCCTCCTTCGGCCCGTCGCCCACGGCGGCCGGAGCGGCGGCG
JMFS140G01+           AATTCCCCCACCACCCACTCCTCCTTCGGCCCGTCGCCCACGGCGGCCGGAGCGGCGGCG
JMFF013O01+           AATTCCCCCACCACCCACTCCTCCTTCGGCCCGTCGCCCACGGCGGCCGGAGCGGCGGCG
                      ____________________________________________________________
consensus             AATTCCCCCACCACCCACTCCTCCTTCGGCCCGTCGCCCACGGCGGCCGGAGCGGCGGCG
 
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rJMFF037A01+          TCCTTCACCGCCGTGCCGCCAAAAGAGGAAGAGGAAGCGGATGTGGAAGTGGAAGGGCTT
JMFS140G01+           TCCTTCACCGCCGTGCCGCCAAAAGAGGAAGAGGAAGCGGATGTGGAAGTGGAAGGGCTT
JMFF013O01+           TCCTTCACCGCCGTGCCGCCAAAAGAGGAAGAGGAAGCGGATGTGGAAGTGGAAGGGCTT
                      ____________________________________________________________
consensus             TCCTTCACCGCCGTGCCGCCAAAAGAGGAAGAGGAAGCGGATGTGGAAGTGGAAGGGCTT
 
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rJMFF037A01+          GGGCTCCTCCTCTTGTCCAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTC
JMFS140G01+           GGGCTCCTCCTCTTGTCCAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTT
JMSF007L04+                            CAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTC
JMFF013O01+           GGGCTCCTCCTCTTGTCCAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTC
                      ____________________________________________________________
consensus             GGGCTCCTCCTCTTGTCCAGCACAGAAATGGGTTCATTGCTCCCAAAGCTTCCATCTCTC
 
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rJMFF037A01+          TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
JMFS140G01+           TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
JMSF007L04+           TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
JMFF013O01+           TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
                      ____________________________________________________________
consensus             TTCAACTTGGCATCTTGAGGCACAGAAGAAGATGCAGAAATCGAAGACCCAAACCGACCA
 
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rJMFF037A01+          ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCA                    
JMFS140G01+           ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCATTCCTATCATC         
JMSF007L04+           ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCATTCCTATCATCCATATCACC
JMFF013O01+           ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCATTCCTATCATCCATATCACC
                      ____________________________________________________________
consensus             ACCTCGCTAACAACACCTTTCCCTTGCAAGTTATATTGCATTCCTATCATCCATATCACC
 
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JMSF007L04+           ATTTCAGCTCCATATCTGCACCTCAAAAACTCTGTACAACAACAACAACACTACCCTTTC
JMFF013O01+           ATTTCAGCTCCATATCTGCACCTCAAAAACTCTGTACAACAACAACAACACTACCCTTTC
                      ____________________________________________________________
consensus             ATTTCAGCTCCATATCTGCACCTCAAAAACTCTGTACAACAACAACAACACTACCCTTTC
 
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JMSF007L04+           TTCTTCTTCTTCTTCTCTGTGGCTCTCTTTTTATGTGGCTACTGTGTAATCTCTAGTCCC
JMFF013O01+           TTCTTCTTCTTCTTCTCTGTGGCTCTCTTTTTATGTGGCTACTGTGTAATCTCTAGTCCC
                      ____________________________________________________________
consensus             TTCTTCTTCTTCTTCTCTGTGGCTCTCTTTTTATGTGGCTACTGTGTAATCTCTAGTCCC
 
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JMSF007L04+           TAGGCTTTAGGGGCCGGTGCTACTGTGAAGTATGAATCCCCCCTTGGGCCTTCCC     
JMFF013O01+           TAGGCTTTAGGGGCCGGTGCTACTGTGAAGTATGAATCCCCCCTTGGGCCTTCCCTCACT
                      ____________________________________________________________
consensus             TAGGCTTTAGGGGCCGGTGCTACTGTGAAGTATGAATCCCCCCTTGGGCCTTCCCTCACT