clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002M05 | Sequence | 356 | 001618 (5) | ref|XP_009790737.1| | 83.2 | PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana sylvestris] | 653 | 012785 (3) | ref|XP_006366766.1| | 2e-51 | PREDICTED: transmembrane 9 superfamily member 4-like [Solanum tuberosum] |
JMFF013L06 | Sequence | 517 | 001618 (5) | ref|XP_009790737.1| | 176 | PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana sylvestris] | 753 | 012785 (3) | ref|XP_004243223.1| | 296 | PREDICTED: transmembrane 9 superfamily member 4 [Solanum lycopersicum] |
JMFS042H11 | Sequence | 623 | 001618 (5) | ref|XP_009790737.1| | 265 | PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana sylvestris] | |||||
JMFS168B01 | Sequence | 625 | 001618 (5) | ref|XP_009790737.1| | 341 | PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana sylvestris] | |||||
JMSF051G21 | Sequence | 651 | 001618 (5) | ref|XP_009790737.1| | 268 | PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana sylvestris] | 741 | 012785 (3) | ref|XP_009602688.1| | 211 | PREDICTED: transmembrane 9 superfamily member 4 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS168B01+ CCACTCCA
____________________________________________________________
consensus CCACTCCA
. : . : . : . : . : . :
JMFS168B01+ GCTCCCTCATACTCGTGAATCAGAACTGTAAATTTCAGGTGGTTAATGATGTAATCATCT
____________________________________________________________
consensus GCTCCCTCATACTCGTGAATCAGAACTGTAAATTTCAGGTGGTTAATGATGTAATCATCT
. : . : . : . : . : . :
JMFS168B01+ TTACTATTTGGTGGTGTATAGCCAACCGGAAACCCAGTCCACTGTATCTTCATTCCATTT
JMFS042H11+ TCATTCCATTT
JMSF051G21+ TCATTCCATTT
____________________________________________________________
consensus TTACTATTTGGTGGTGTATAGCCAACCGGAAACCCAGTCCACTGTATCTTCATTCCATTT
. : . : . : . : . : . :
JMFS168B01+ TGGGTGGCATATCTCAAAGCAGGCAAGTTATCCAGGATCATATTCACCTGATAAAGCTCA
JMFS042H11+ GGGGTGGCATATCTCAAAGCAGGCAAGTTATCCAGGATCATATTCACCTGATAAAGCTCA
JMSF051G21+ TGGGTGGCATATCTCANAGCAGGCAAGTTATCCAGGATCATATTCACCTGATAAAGCTCA
____________________________________________________________
consensus TGGGTGGCATATCTCAAAGCAGGCAAGTTATCCAGGATCATATTCACCTGATAAAGCTCA
. : . : . : . : . : . :
JMFS168B01+ TGGGTCCTCTGTTTCAAGAGCTTTACCTCATTCTCATTTAGTCCGGGGGTAGTGCAGAGG
JMFS042H11+ TGGGTCCTCTGTTTCAAGAGCTTTACCTCATTCTCATTTAGTCCGGGGGTAGTGCAGAGG
JMSF051G21+ TGGGTCCTCTGTTTCAAGAGCTTTACCTCATTCTCATTTAGTCCGGGGGTAGTGCAGAGG
____________________________________________________________
consensus TGGGTCCTCTGTTTCAAGAGCTTTACCTCATTCTCATTTAGTCCGGGGGTAGTGCAGAGG
. : . : . : . : . : . :
JMFS168B01+ TAAAGTGATTCATTAACATTCATCCTGAAACGGTAGGGAGAGGTATCAATCTGATCTCCC
JMFS042H11+ TAAAGTGATTCATTAACATTCATCCTGAAACGGTAGGGAGAGGTATCAATCTGATCTCCC
JMSF051G21+ TAAAGTGATTCATTAACATTCATCCTGAAACGGTAGGGAGAGGTATCAATCTGATCTCCC
JMFF013L06+ CCTGAAACGGTAGGGAGAGGTATCAATCTGATCTCCC
____________________________________________________________
consensus TAAAGTGATTCATTAACATTCATCCTGAAACGGTAGGGAGAGGTATCAATCTGATCTCCC
. : . : . : . : . : . :
JMFS168B01+ ATTAACAGTTCTCCAAGATTCTCGGCACTTTTCTTGATGCCACTCTGAGGTTTGCAGTAA
JMFS042H11+ ATTAACAGTTCTCCAAGATTCTCGGCACTTTTCTTGATGCCACTCTGAGGTTTGCAGTAA
JMSF051G21+ ATTAACAGTTCTCCAAGATTCTCGGCACTTTTCTTGATGCCACTCTGAGGTTTGCAGTAA
JMFF013L06+ ATTAACAGTTCTCCAAGATTCTCGGCACTTTTCTTGATGCCACTCTGAGGTTTGCAGTAA
____________________________________________________________
consensus ATTAACAGTTCTCCAAGATTCTCGGCACTTTTCTTGATGCCACTCTGAGGTTTGCAGTAA
. : . : . : . : . : . :
JMFS168B01+ GGAAGACTATAATAGCTGAATGGGAGCTCAGTCTCAATTGAGGTTAACGAGTTCACTTTG
JMFS042H11+ GGAAGACTATAATAGCTGAATGGGAGCTCAGTCTCAATTGAGGTTAACGAGTTCACTTTG
JMSF051G21+ GGAAGACTATAATAGCTGAATGGGAGCTCAGTCTCAATTGAGGTTAACGAGTTCACTTTG
JMFF002M05+ GTTCACTTTG
JMFF013L06+ GGAAGACTATAATAGCTGAATGGGAGCTCAGTCTCAATTGAGGTTAACGAGTTCACTTTG
____________________________________________________________
consensus GGAAGACTATAATAGCTGAATGGGAGCTCAGTCTCAATTGAGGTTAACGAGTTCACTTTG
. : . : . : . : . : . :
JMFS168B01+ ACAACAATTTCATCACCAGTGGAGTATGTATGCATATAGGTACCCGGCAAATAAAACCCA
JMFS042H11+ ACAACAATTTCATCACCAGTGGAGTATGTATGCATATAGGTACCCGGCAAATAAAACCCA
JMSF051G21+ ACAACAATTTCATCACCAGTGGAGTATGTATGCATATAGGTACCCGGCAAATAAAACCCA
JMFF002M05+ ACAACAATTTCATCACCAGTGGAGTATGTATGCATATAGGTACCCGGCAAATAAAACCCA
JMFF013L06+ ACAACAATTTCATCACCAGTGGAGTATGTATGCATATAGGTACCCGGCAAATAAAACCCA
____________________________________________________________
consensus ACAACAATTTCATCACCAGTGGAGTATGTATGCATATAGGTACCCGGCAAATAAAACCCA
. : . : . : . : . : . :
JMFS168B01+ TTACAAGCATGTGAAATGAGAACGAAATATAAGAATGCAGCCAAGTATCTCCTTCCCGAG
JMFS042H11+ TTACAAGCATGTGAAATGAGAACGAAATATAAGAATGCAGCCAAGTATCTCCTTCCCGAG
JMSF051G21+ TTACAAGCATGTGAAATGAGAACGAAATATAAGAATGCAGCCAAGTATCTCCTTCCCGAG
JMFF002M05+ TTACAAGCATGTGAAATGAGAACGAAATATAAGAATGCAGCCAAGTATCTCCTTCCCGAG
JMFF013L06+ TTACAAGCATGTGAAATGAGAACGAAATATAAGAATGCAGCCAAGTATCTCCTTCCCGAG
____________________________________________________________
consensus TTACAAGCATGTGAAATGAGAACGAAATATAAGAATGCAGCCAAGTATCTCCTTCCCGAG
. : . : . : . : . : . :
JMFS168B01+ ATTGATGACAATGCCATTGCTAGACAAGATGGAGGAGACAGGCCCTCTAAGCCACTAGTA
JMFS042H11+ ATTGATGACAATGCCATTGCTAGACAAGATGGAGGAGACAGGCCCTCTAAGCCACTAGTA
JMSF051G21+ ATTGATGACAATGCCATTGCTAGACAAGATGGAGGAGACAGGCCCTCTAAGCCACTAGTA
JMFF002M05+ ATTGATGACAATGCCATTGCTAGACAAGATGGAGGAGACAGGCCCTGTAAGCCACTAGTA
JMFF013L06+ ATTGATGACAATGCCATTGCTAGACAAGATGGAGGAGACAGGCCCTCTAAGCCACTAGTA
____________________________________________________________
consensus ATTGATGACAATGCCATTGCTAGACAAGATGGAGGAGACAGGCCCTCTAAGCCACTAGTA
. : . : . : . : . : . :
JMFS168B01+ GTAACACAGAAATCATC
JMFS042H11+ GTAACACAGAAATCATCAATCGGAGCTGGATCTGGAAATGAAGAGCGAGCTCAGAGCGAA
JMSF051G21+ GTAACACAGAAATCATCAATCGGAGCTGGATCTGGAAATGAAGAGCGAGCTCAGAGCGAA
JMFF002M05+ GTAACACAGAAATCATCAATCGGAGCTGGATCTGGAAATGAAGAGCGAGCTCAGAGCGAA
JMFF013L06+ GTAACACAGAAATCATCAATCGGAGCTGGATCTGGAAATGAAGAGCGAGCTCAGAGCGAA
____________________________________________________________
consensus GTAACACAGAAATCATCAATCGGAGCTGGATCTGGAAATGAAGAGCGAGCTCAGAGCGAA
. : . : . : . : . : . :
JMFS042H11+ TCAGCTCGGCGAAACTTGTCGGTGAGATCGGGCTGGTTAGCCTTTGATGATTGAGAATGG
JMSF051G21+ TCAGCTCGGCGAAACTTGTCGGTGAGATCGGGCTGGTTAGCCTTTGATGATTGAGAATGN
JMFF002M05+ TCAGCTCGGCGAAACTTGTCGGTGAGATCGGGCTGGTTAGCCTTTGATGATTGAGAATGG
JMFF013L06+ TCAGCTCGGCGAAACTTGTCGGTGAGATCGGGCTGGTTAGCCTTTGATGATTGAGAATGG
____________________________________________________________
consensus TCAGCTCGGCGAAACTTGTCGGTGAGATCGGGCTGGTTAGCCTTTGATGATTGAGAATGG
. : . : . : . : . : . :
JMFS042H11+ TTGGGAGAGGAA
JMSF051G21+ TTGGGAGAGGAAGGAGTAGTGAAAGAGCGCGTGAAC
JMFF002M05+ TTGGGAGAGGAAGGAGTAGTGAAAGAGCGCGTGAACTGT
JMFF013L06+ TTGGGAGAGGAAGGAGTAGTGAAAGAGCGCGTGAACTGTGAAAAATGAAGATGGCAAATT
____________________________________________________________
consensus TTGGGAGAGGAAGGAGTAGTGAAAGAGCGCGTGAACTGTGAAAAATGAAGATGGCAAATT