Contig 001612:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012M18Sequence598001612 (3)emb|CDP07340.1|9e-76unnamed protein product [Coffea canephora]737016940emb|CDP07339.1|3e-114unnamed protein product [Coffea canephora]
JMFS009G06Sequence621001612 (3)emb|CDP07340.1|7e-82unnamed protein product [Coffea canephora]
JMFS111F08Sequence625001612 (3)emb|CDP07340.1|1e-80unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS009G06+                                    TTTCGGCGCAAGGGGTGAACTTCATCATCAGGCGG
JMFS111F08+                                             AAGGGGTGAACTTCATCATCAGGCGG
                      ____________________________________________________________
consensus                                      TTTCGGCGCAAGGGGTGAACTTCATCATCAGGCGG
 
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JMFS009G06+           ATGGCGCAGTCGGGCTTGGGGGGCTTGCCGTGGGCGCCGATGATGGGGAACCAGTCGTTG
JMFS111F08+           ATGGCGCAGTCGGGCTTGGGGGGCTTGCCGTGGGCGCCGATGATGGGGAACCAGTCGTTG
JMFF012M18+             GGCGCAGTCGGGCTTGGGGGGCTTGCCGTGGGCGCCGATGATGGGGAACCAGTCGTTG
                      ____________________________________________________________
consensus             ATGGCGCAGTCGGGCTTGGGGGGCTTGCCGTGGGCGCCGATGATGGGGAACCAGTCGTTG
 
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JMFS009G06+           ATGGTCTCGCCGGAGATGATCTTCTGGGCGGAGACTTTGGCGACGCCGATGAAGTCGGCG
JMFS111F08+           ATGGTCTCGCCGGAGATGATCTTCTGGGCGGAGACTTTGGCGACGCCGATGAAGTCGGCG
JMFF012M18+           ATGGTCTCGCCGGAGATGATCTTCTGGGCGGAGACTTTGGCGACGCCGATGAAGTCGGCG
                      ____________________________________________________________
consensus             ATGGTCTCGCCGGAGATGATCTTCTGGGCGGAGACTTTGGCGACGCCGATGAAGTCGGCG
 
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JMFS009G06+           CCGAAGACGTCGTTGTCCTTCACCTGGAACTCCACCTCGGAGACGGGGTGGGCCACGGGG
JMFS111F08+           CCGAAGACGTCGTTGTCCTTCACCTGGAACTCCACCTCGGAGACGGGGTGGGCCACGGGG
JMFF012M18+           CCGAAGACGTCGTTGTCCTTCACCTGGAACTCCACCTCGGAGACGGGGTGGGCCACGGGG
                      ____________________________________________________________
consensus             CCGAAGACGTCGTTGTCCTTCACCTGGAACTCCACCTCGGAGACGGGGTGGGCCACGGGG
 
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JMFS009G06+           ATCTTGAAGTGCTCGACCCAGACGGGGTCCTGGGAATTGGAGATCACGCGGGTGCGAGCC
JMFS111F08+           ATCTTGAAGTGCTCGACCCAGACGGGGTCCTGGGAATTGGAGATCACGCGGGTGCGAGCC
JMFF012M18+           ATCTTGAAGTGCTCGACCCAGACGGGGTCCTGGGAATTGGAGATCACGCGGGTGCGAGCC
                      ____________________________________________________________
consensus             ATCTTGAAGTGCTCGACCCAGACGGGGTCCTGGGAATTGGAGATCACGCGGGTGCGAGCC
 
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JMFS009G06+           ACCGTGGCGCCGGCGAGGCACACTTTGACGTAAGGGTCGCTGGTGATAATCCGGGTGTGG
JMFS111F08+           ACCGTGGCGCCGGCGAGGCACACTTTGACGTAAGGGTCGCTGGTGATAATCCGGGTGTGG
JMFF012M18+           ACCGTGGCGCCGGCGAGGCACACTTTGACGTAAGGGTCGCTGGTGATAATCCGGGTGTGG
                      ____________________________________________________________
consensus             ACCGTGGCGCCGGCGAGGCACACTTTGACGTAAGGGTCGCTGGTGATAATCCGGGTGTGG
 
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JMFS009G06+           CGGCGGACCTTGTTCCCCTGCCGGGTCTCGGGCTTCCGGCAATCGAACGCCGTGAAGAAT
JMFS111F08+           CGGCGGACCTTGTTCCCCTGCCGGGTCTCGGGCTTCCGGCAATCGAACGCCGTGAAGAAT
JMFF012M18+           CGGCGGACCTTGTTCCCCTGCCGGGTCTCGGGCTTCCGGCAATCGAACGCCGTGAAGAAT
                      ____________________________________________________________
consensus             CGGCGGACCTTGTTCCCCTGCCGGGTCTCGGGCTTCCGGCAATCGAACGCCGTGAAGAAT
 
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JMFS009G06+           TGCCGGATGCGCTCCGAGACGATGTCCATATTGGGCAGCCGCCGGGCTTCAAGAATCTTC
JMFS111F08+           TGCCGGATGCGCTCCGAGACGATGTCCATATTGGGCAGCCGCCGGGCTTCAAGAATCTTC
JMFF012M18+           TGCCGGATGCGCTCCGAGACGATGTCCATATTGGGCAGCCGCCGGGCTTCAAGAATCTTC
                      ____________________________________________________________
consensus             TGCCGGATGCGCTCCGAGACGATGTCCATATTGGGCAGCCGCCGGGCTTCAAGAATCTTC
 
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JMFS009G06+           AAGTCGAGATCCCCATGGAGATATACCACATTCTCTGACATCCCATCGGACATTTTCACA
JMFS111F08+           AAGTCGAGATCCCCATGGAGATATACCACATTCTCTGACATCCCATCGGACATTTTCACA
JMFF012M18+           AAGTCGAGATCCCCATGGAGATATACCACATTCTCTGACATCCCATCGGACATTTTCACA
                      ____________________________________________________________
consensus             AAGTCGAGATCCCCATGGAGATATACCACATTCTCTGACATCCCATCGGACATTTTCACA
 
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JMFS009G06+           TCCGAAATAATGCAGAATGGGCAGTTATTGTTTGAGGCGGTGGTGCCCGGCTGTTGGCTG
JMFS111F08+           TCCGAAATAATGCAGAATGGGCAGTTATTGTTTGAGGCGGTGGTGCCCGGCTGTTGGCTG
JMFF012M18+           TCCGAAATAATGCAGAATGGGCAGTTATTGTTTGAGGCGGTGGTGCCCGGCTGTTGGCTG
                      ____________________________________________________________
consensus             TCCGAAATAATGCAGAATGGGCAGTTATTGTTTGAGGCGGTGGTGCCCGGCTGTTGGCTG
 
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JMFS009G06+           GGGAGGAGGAGATGGGAAAATGATTCCTCCGCCGTAGCCAACGGCT              
JMFS111F08+           GGGAGGAGGAGATGGGAAAATGATTCCTCCGCCGTAGCCAACGGCTGCAGAAGGTGG   
JMFF012M18+           GGGAGGAGGAGATGGGAAAATGATTCCTCCGCCGTAGCCAACGGCTGCAGAAGGTGGAGC
                      ____________________________________________________________
consensus             GGGAGGAGGAGATGGGAAAATGATTCCTCCGCCGTAGCCAACGGCTGCAGAAGGTGGAGC