Contig 001610:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012G15Sequence514001610 (8)ref|XP_006344536.1|136PREDICTED: uncharacterized protein LOC102581714 [Solanum tuberosum]728001610 (8)ref|XP_006344536.1|165PREDICTED: uncharacterized protein LOC102581714 [Solanum tuberosum]
JMFF021I21Sequence353001610 (8)ref|XP_006344536.1|98.6PREDICTED: uncharacterized protein LOC102581714 [Solanum tuberosum]649001610 (8)ref|NP_001235783.1|2e-35uncharacterized protein LOC100500282 [Glycine max] gb|ACU15317.1| unknown [Glyci
JMFN009N04Sequence544001610 (8)ref|XP_006344536.1|149PREDICTED: uncharacterized protein LOC102581714 [Solanum tuberosum]
JMFN025P02Sequence621001610 (8)ref|XP_006344536.1|149PREDICTED: uncharacterized protein LOC102581714 [Solanum tuberosum]
JMSF016N12Sequence509001610 (8)ref|XP_006344536.1|157PREDICTED: uncharacterized protein LOC102581714 [Solanum tuberosum]697001610 (8)ref|XP_006344536.1|165PREDICTED: uncharacterized protein LOC102581714 [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF021I21-                     TTTTACCTCAAAAGAGGCATTCCATGTAACAGGTAAGTTTCATGATGAT
                      ____________________________________________________________
consensus                        TTTTACCTCAAAAGAGGCATTCCATGTAACAGGTAAGTTTCATGATGAT
 
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rJMFF021I21-          ATATCCAAGTAATGTGAGTGAAAGTCAGTAAGAAGCCTATACAAGATTTTCCTTCCTTCT
rJMFF012G15-                                                     AGATTTTCCTTCCTTCT
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consensus             ATATCCAAGTAATGTGAGTGAAAGTCAGTAAGAAGCCTATACAAGATTTTCCTTCCTTCT
 
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rJMFF021I21-          TAAAACCACAACAGAATAAT-GCAGTCTAGTACAACATATAAATAGGTATATACTGCATA
rJMFF012G15-          TAAAACCACAACAGAATAATGGCAGTCTAGTACAACATATAAATAGGTATATACTGCATA
rJMSF016N12-                               GCAGTCTAGTACAACATATAAATAGGTATATACTGCATA
                      ____________________________________________________________
consensus             TAAAACCACAACAGAATAATGGCAGTCTAGTACAACATATAAATAGGTATATACTGCATA
 
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rJMFF021I21-          GGTACCCGAGATTGCTGAGCCATGATGCACCCTAGGAGTAATCATCGTCTTCTTCATCTC
JMFN025P02+                           GAGCCATGATGCACCCTAGGAGTAATCATCGTCTTCTTCATCTC
rJMFF012G15-          GGTACCCGAGATTGCTGAGCCATGATGCACCCTAGGAGTAATCATCGTCTTCTTCATCTC
rJMSF016N12-          GGTACCCGAGATTGCTGAGCCATGATGCACCCTAGGAGTAATCATCGTCTTCTTCATCTC
                      ____________________________________________________________
consensus             GGTACCCGAGATTGCTGAGCCATGATGCACCCTAGGAGTAATCATCGTCTTCTTCATCTC
 
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rJMFF021I21-          TTGACCCGAGGAATCTCCTAACAACAGCAGCGGCTGCACCAAAGAGCATAAAGAGAACGA
JMFN025P02+           TGACCCNGAGGAATCTCCTAACAACAGCAGCGGCTGCACCAAAGAGCATAAAGAGAACGA
JMFN009N04+                                            CTGCACCAAAGAGCATAAAGAGAACGA
rJMFF012G15-          TTGACCCGAGGAATCTCCTAACAACAGCAGCGGCTGCACCAAAGAGCATAAAGAGAACGA
rJMSF016N12-          TTGACCCGAGGAATCTCCTAACAACAGCAGCGGCTGCACCAAAGAGCATAAAGAGAACGA
                      ____________________________________________________________
consensus             TTGACCCGAGGAATCTCCTAACAACAGCAGCGGCTGCACCAAAGAGCATAAAGAGAACGA
 
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rJMFF021I21-          GGGTGTCAAATCCACCTCCAACACCTACGGCAACACCCGGTCCAGGAGCAAAGAATGAGA
JMFN025P02+           GGGTGTCAAATCCACCTCCAACACCTACGGCAACACCCGGTCCAGGAGCAAAGAATGAGA
JMFN009N04+           GGGTGTCAAATCCACCTCCAACACCTACGGCAACACCCGGTCCAGGAGCAAAGAATGAGA
rJMFF012G15-          GGGTGTCAAATCCACCTCCAACACCTACGGCAACACCCGGTCCAGGAGCAAAGAATGAGA
rJMSF016N12-          GGGTGTCAAATCCACCTCCAACACCTACGGCAACACCCGGTCCAGGAGCAAAGAATGAGA
JMSF016N12+                                     ACGGCAACACCCGGTCCAGGAGCAAAGAATGAGA
JMFF012G15+                                     ACGGCAACACCCGGTCCAGGAGCAAAGAATGAGA
                      ____________________________________________________________
consensus             GGGTGTCAAATCCACCTCCAACACCTACGGCAACACCCGGTCCAGGAGCAAAGAATGAGA
 
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rJMFF021I21-          AGGGCGTCCAGCCCCAT-CCGCCATAGTATGGCACACCGATACCATAGCCATATCCACCA
JMFN025P02+           AGGGCGTCCAGCCCCAT-CCGCCATAGTATGGCACACCGATACCATAGCCATATCCACCA
JMFN009N04+           AGGGCGTCCAGCCCCAT-CCGCCATAGTATGGCACACCGATACCATAGCCATATCCACCA
rJMFF012G15-          AGGGCGTCCAGCCCCAT-CCGCCATAGTATGGCACACCGATACCATAGCCATATCCACCA
rJMSF016N12-          AGGGCGTCCAGCCCCAT-CCGCCATAGTATGGCACACCGATACCATAGCCATATCCACCA
JMSF016N12+           AGGGCGTCCAGCCCCAT-CCGCCATAGTATGGCACACCGATACCATAGCCATATCCACCA
JMFF012G15+           AGGGCGTCCAGCCCCATCCCGCCATAGTATGGCACACCGATACCATAGCCATATCCACCA
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consensus             AGGGCGTCCAGCCCCAT-CCGCCATAGTATGGCACACCGATACCATAGCCATATCCACCA
 
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rJMFF021I21-          ACTAGAGGAGGGGCAACTCGTGGGTTAATGTAAACATTGGTCCTGGAATTATTAATCCTT
JMFN025P02+           ACTAGAGGAGGGGCAACTCGTGGGTTAATGTAAACATTGGTCCTGGAATTATTAATCCTT
JMFN009N04+           ACTAGAGGAGGGGCAACTCGTGGGTTAATGTAAACATTGGTCCTGGAATTATTAATCCTT
rJMFF012G15-          ACTAGAGGAGGGGCAACTCGTGGGTTAATGTAAACATTGGTCCTGGAATTATTAATCCTT
rJMSF016N12-          ACTAGAGGAGGGGCAACTCGTGGGTTAATGTAAACATTGGTCCTGGAATTATTAATCCTT
JMSF016N12+           ACTAGAGGAGGGGCAACTCGTGGGTTAATGTAAACATTGGTCCTGGAATTATTAATCCTT
JMFF012G15+           ACTAGAGGAGGGGCAACTCGTGGGTTAATGTAAACATTGGTCCTGGAATTATTAATCCTT
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consensus             ACTAGAGGAGGGGCAACTCGTGGGTTAATGTAAACATTGGTCCTGGAATTATTAATCCTT
 
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rJMFF021I21-          GGACCCGAAGCGCGCGGCGCCGATGAACGGAAGGCCTGACCGCCAACTCGGCCGCCGGTC
JMFN025P02+           GGACCCGAAGCGCGCGGCGCCGATGAACGGAAGGCCTGACCGCCAACTCGGCCGCCGGTC
JMFN009N04+           GGACCCGAAGCGCGCGGCGCCGATGAACGGAAGGCCTGACCGCCAACTCGGCCGCCGGTC
rJMFF012G15-          GGACCCGAAGCGCGCGGCGCCGATGAACGGAAGGCCTGACCGCCAACTCGGCCGCCGGTC
rJMSF016N12-          GGACCCGAAGCGCGCGGCGCCGATGAACGGAAGGCCTGACCGCCAACTCGGCCGCCGGTC
JMSF016N12+           GGACCCGAAGCGCGCGGCGCCGATGAACGGAAGGCCTGACCGCCAACTCGGCCGCCGGTC
JMFF021I21+             ACCCGAAGCGCGCGGCGCCGATGAACGGAAGGCCTGACCGCCAACTCGGCCGCCGGTC
JMFF012G15+           GGACCCGAAGCGCGCGGCGCCGATGAACGGAAGGCCTGACCGCCAACTCGGCCGCCGGTC
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consensus             GGACCCGAAGCGCGCGGCGCCGATGAACGGAAGGCCTGACCGCCAACTCGGCCGCCGGTC
 
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rJMFF021I21-          TTAGCAGCAGACGCAGGGTCTACTGAGCCCAGTGTGAGCACCCCAGCTGCCAACGCAACC
JMFN025P02+           TTAGCAGCAGACGCAGGGTCTACTGAGCCCAGTGTGAGCACCCCAGCTGCCAACGCAACC
JMFN009N04+           TTAGCAGCAGACGCAGGGTCTACTGAGCCCAGTGTGAGCACCCCAGCTGCCAACGCAACC
rJMFF012G15-          TTAGCAGCAGACGCAGGGTCTACTGAGCCCAGTGTGAGCACCCCAGCTGCCAACGCAACC
rJMSF016N12-          TTAGCAGCAGACGCAGGGTCTACTGAGCCCAGTGTGAGCACCCCAGCTGCCAACGCAACC
JMSF016N12+           TTAGCAGCAGACGCAGGGTCTACTGAGCCCAGTGTGAGCACCCCAGCTGCCAACGCAACC
JMFF021I21+           TTAGCAGCAGACGCAGGGTCTACTGAGCCCAGTGTGAGCACCCCAGCTGCCAACGCAACC
JMFF012G15+           TTAGCAGCAGACGCAGGGTCTACTGAGCCCAGTGTGAGCACCCCAGCTGCCAACGCAACC
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consensus             TTAGCAGCAGACGCAGGGTCTACTGAGCCCAGTGTGAGCACCCCAGCTGCCAACGCAACC
 
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rJMFF021I21-          AACGCCAATTTCGCCATTTTATTCTCATTTTTCCTCAAGGGCTGATTTTCAGCGTCTGGG
JMFN025P02+           AACGCCAATTTCGCCATTTTATTCTCATTTTTCCTCAAGGGCTGATTTTCAGCGTCTGGG
JMFN009N04+           AACGCCAATTTCGCCATTTTATTCTCATTTTTCCTCAAGGGCTGATTTTCAGCGTCTGGG
rJMFF012G15-          AACGCCAATTTCGCCATTTTATTCTCATTTTTCCTCAAGGGCTGATTTTCAGCGTCTGGG
rJMSF016N12-          AACGCCAATTTCGCCATTTTATTCTCATTTTTCCTCAAGGGCTGATTTTCAGCGTCTGGG
JMSF016N12+           AACGCCAATTTCGCCATTTTATTCTCATTTTTCCTCAAGGGCTGATTTTCAGCGTCTGGG
JMFF021I21+           AACGCCAATTTCGCCATTTTATTCTCATTTTTCCTCAAGGGCTGATTTTCAGCGTCTGGG
JMFF012G15+           AACGCCAATTTCGCCATTTTATTCTCATTTTTCCTCAAGGGCTGATTTTCAGCGTCTGGG
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consensus             AACGCCAATTTCGCCATTTTATTCTCATTTTTCCTCAAGGGCTGATTTTCAGCGTCTGGG
 
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rJMFF021I21-          TT                                                          
JMFN025P02+           TTGCAAGAGCAGGAGATTTTAGTGGTATTTACGAAACTGCATCTGAAATTCCGGGTGGGT
JMFN009N04+           TTGCAAGAGCAGGAGATTTTAGTGGTATTTACGAAACTGCATCTGAAATTCCGGGTGGGT
rJMFF012G15-          TTGCAAGAGCAGGAGATTTTAGTGGTATTTACGAAACTGCATCTGAAATTCCGGGTGGGT
rJMSF016N12-          TTGCAAGAGCAGGAGATTTTAGTGGTATTTACGAAACTGCATCTGAAATTCCGGGTGGGT
JMSF016N12+           TTGCAAGAGCAGGAGATTTTAGTGGTATTTACGAAACTGCATCTGAAATTCCGGGTGGGT
JMFF021I21+           TTGCAAGAGCAGGAGATTTTAGTGGTATTTACGAAACTGCATCTGAAATTCCGGGTGGGT
JMFF012G15+           TTGCAAGAGCAGGAGATTTTAGTGGTATTTACGAAACTGCATCTGAAATTCCGGGTGGGT
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consensus             TTGCAAGAGCAGGAGATTTTAGTGGTATTTACGAAACTGCATCTGAAATTCCGGGTGGGT
 
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JMFN025P02+           TTAAAAGATGAAGCGAGAGGATTAGTTAGAAAGCTTTGCTGGAGAAGAGCTAAAGACATG
JMFN009N04+           TTAAAAGATGAAGCGAGAGGATTAGTTAGAAAGCTTTGCTGGAGAAGAGCTAAAGACATG
rJMFF012G15-          TTAAAAGATGAAGCGAGAGGATTAGTTAGAAAGCTTTGCTGGAGAAGAGCTAAAGACATG
rJMSF016N12-          TTAAAAGATGAAGCGAGAGGATTAGTTAGAAAGCTTTGCTGGAGAAGAGCTAAAGACATG
JMSF016N12+           TTAAAAGATGAAGCGAGAGGATTAGTTAGAAAGCTTTGCTGGAGAAGAGCTAAAGACATG
JMFF021I21+           TTAAAAGATGAAGCGAGAGGATTAGTTAGAAAGCTTTGCTGGAGAAGAGCTAAAGACATG
JMFF012G15+           TTAAAAGATGAAGCGAGAGGATTAGTTAGAAAGCTTTGCTGGAGAAGAGCTAAAGACATG
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consensus             TTAAAAGATGAAGCGAGAGGATTAGTTAGAAAGCTTTGCTGGAGAAGAGCTAAAGACATG
 
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JMFN025P02+           TTGGTGTTGCAATGGTGATGAGGAGCTCAGCTGAAATC                      
JMFN009N04+           TTGGTGTTGCAATGGTGATGAGGAGCTCAGCTGAAATC                      
rJMFF012G15-          TTGGTGTTGCAATGGTGATGAGGAGCTCAGCTGAAATCTTGTTTCCGGCGAC        
rJMSF016N12-          TTGGTGTTGCAATGGTGATGAGGAGCTCAGCTGAAATCTTGTTTCCGGCGACAAC     
JMSF016N12+           TTGGTGTTGCAATGGTGATGAGGAGCTCAGCTGAAATCTTGTTTCCGGCGACAAC     
JMFF021I21+           TTGGTGTTGCAATGGTGATGAGGAGCTCAGCTGAAATCTTGTTTCCGGCGACAAC     
JMFF012G15+           TTGGTGTTGCAATGGTGATGAGGAGCTCAGCTGAAATCTTGTTTCCGGCGACAACAGAGT
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consensus             TTGGTGTTGCAATGGTGATGAGGAGCTCAGCTGAAATCTTGTTTCCGGCGACAACAGAGT