| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012C04 | Sequence | 541 | 001609 (7) | 607 | 000419 (8) | ref|XP_009104154.1| | 8e-19 | PREDICTED: serine/threonine-protein kinase SRK2A [Brassica rapa] emb|CDY46190.1| | |||
| JMFF012I21 | Sequence | 551 | 001609 (7) | ref|XP_009348751.1| | 8e-100 | PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri] | 682 | 000419 (8) | gb|KDO50087.1| | 7e-41 | hypothetical protein CISIN_1g0187341mg, partial [Citrus sinensis] gb|KDO50088.1| |
| JMFF028B09 | Sequence | 551 | 001609 (7) | ref|XP_009348751.1| | 7e-105 | PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri] | 765 | 000419 (8) | ref|XP_003540159.1| | 6e-50 | PREDICTED: serine/threonine-protein kinase SRK2A-like [Glycine max] |
| JMFF039L08 | Sequence | 540 | 001609 (7) | 679 | 000419 (8) | ref|XP_006384980.1| | 1e-39 | hypothetical protein POPTR_0004s22770g [Populus trichocarpa] gb|ERP62777.1| hypo | |||
| JMFF050E24 | Sequence | 631 | 001609 (7) | emb|CAE54076.1| | 3e-22 | serine/threonine-protein kinase [Fagus sylvatica] | 645 | 000419 (8) | emb|CBI29763.3| | 2e-18 | unnamed protein product [Vitis vinifera] |
| JMFS119C06 | Sequence | 621 | 001609 (7) | ref|XP_009348751.1| | 3e-112 | PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri] | |||||
| JMSF010A14 | Sequence | 228 | 001609 (7) | 720 | 000419 (8) | ref|XP_009776074.1| | 5e-58 | PREDICTED: serine/threonine-protein kinase SRK2A [Nicotiana sylvestris] gb|AAL89 | |||
This contig is upended
. : . : . : . : . : . :
JMFF012I21+ GAGATAGAACCTCTGGAGCAATATAAGCTGGAGTGCCAACAG
JMFF028B09+ GCCGTCATACTCTCTCCGAGATAGAACCTCTGGAGCAATATAAGCTGGAGTGCCAACAG
____________________________________________________________
consensus GCCGTCATACTCTCTCCGAGATAGAACCTCTGGAGCAATATAAGCTGGAGTGCCAACAG
. : . : . : . : . : . :
JMFF012I21+ TCGATTTTGGTCTTGAATGCAGCAGAGATGACTAGGTACAGGGGTAGAGAAAAATGAGCA
JMFF028B09+ TCGATTTTGGTCTTGAATGCAGCAGAGATGACTAGGTACAGGGGTAGAGAAAAATGAGCA
____________________________________________________________
consensus TCGATTTTGGTCTTGAATGCAGCAGAGATGACTAGGTACAGGGGTAGAGAAAAATGAGCA
. : . : . : . : . : . :
JMFF012I21+ GCCAACTCTTCTATCAAATGTTACCACGTAATATACATACCTTTGAGTAGCCAAAATCAC
JMFF028B09+ GCCAACTCTTCTATCAAATGTTACCACGTAATATACATACCTTTGAGTAGCCAAAATCAC
JMFS119C06+ GAGTAGCCAAAATCAC
____________________________________________________________
consensus GCCAACTCTTCTATCAAATGTTACCACGTAATATACATACCTTTGAGTAGCCAAAATCAC
. : . : . : . : . : . :
JMFF012I21+ AAATCTTCAGGCGAGGCGCCGGGCTTCCATCCAAGAGGGTATTCTCCAGCTTCAGATCTC
JMFF028B09+ AAATCTTCAGGCGAGGCGCCGGGCTTCCATCCAAGAGGGTATTCTCCAGCTTCAGATCTC
JMFS119C06+ AAATCTTAAGACGTGGTGCGGCACTCCCATCCAGTAGGGTATTCTCCAGCTTTAGGTCTC
____________________________________________________________
consensus AAATCTTCAGGCGAGGCGCCGGGCTTCCATCCAAGAGGGTATTCTCCAGCTTCAGATCTC
. : . : . : . : . : . :
JMFF012I21+ TATGACATATTTGCAAAGAGTGACAGTAGCTGACTCCAGAAATAAGCTGCTGGAAGAAGT
JMFF028B09+ TATGACATATTTGCAAAGAGTGACAGTAGCTGACTCCAGAAATAAGCTGCTGGAAGAAGT
JMFS119C06+ GATGACATATTTGCAAAGAGTGACAGTAGCTGACTCCTGAAATAAGCTGCTGGAAGCTGT
____________________________________________________________
consensus TATGACATATTTGCAAAGAGTGACAGTAGCTGACTCCAGAAATAAGCTGCTGGAAGAAGT
. : . : . : . : . : . :
JMFF012I21+ ACCTAGCCTCATCCTCACTGAATCTTCCCACATTGCAGATGCGTTCAAAGAGCTCTCCAC
JMFF028B09+ ACCTAGCCTCATCCTCACTGAATCTTCCCACATTGCAGATGCGTTCAAAGAGCTCTCCAC
JMFS119C06+ ACCTAGCCTCGTCTTCACTGAACCTTCCCGCATTGCAGATTCGATCAAAAAGCTCTCCAC
____________________________________________________________
consensus ACCTAGCCTCATCCTCACTGAATCTTCCCACATTGCAGATGCGTTCAAAGAGCTCTCCAC
. : . : . : . : . : . :
JMFF012I21+ CTGCTGCATATTCCATTACAATGGCAAGATGAGTGGGAGTCAGAACCACCTCCTTGAACC
JMFF028B09+ CTGCTGCATATTCCATTACAATGGCAAGATGAGTGGGAGTCAGAACCACCTCCTTGAACC
JMFS119C06+ CTGCTGCATATTCCATGACAATGGCAAGATGAGTAGGAGTCAATATGACCTCCTTGAACC
____________________________________________________________
consensus CTGCTGCATATTCCATTACAATGGCAAGATGAGTGGGAGTCAGAACCACCTCCTTGAACC
. : . : . : . : . : . :
JMFF012I21+ GAATGATGTTCGGGTGACGAAGTGATCTGTGGTTTATGATCTCCCGTGCCACATTCTCAT
JMFF028B09+ GAATGATGTTCGGGTGACGAAGTGATCTGTGGTTTATGATCTCCCGTGCCACATTCTCAT
JMFS119C06+ GAATTATGTTTGGGTGTCGCAGTGATCTATGGTTTATGATCTCCCTGGCCACATTCTCAT
JMFF050E24+ TTATGATCTCCCGTGCCACATTCTCAT
____________________________________________________________
consensus GAATGATGTTCGGGTGACGAAGTGATCTGTGGTTTATGATCTCCCGTGCCACATTCTCAT
. : . : . : . : . : . :
JMFF012I21+ CAATCTTAAGTCCTCTCTCGATGTACTTCATGGCCACAAGCTCCTTTGTCTCCTTGTTCC
JMFF028B09+ CAATCTTAAGTCCTCTCTCGATGTACTTCATGGCCACAAGCTCCTTTGTCTCCTTGTTCC
JMFS119C06+ CAATCTTAAAGCCTCTTTCTATGTACTTCATGGCCACGAGCTCCTTCGTCTCCTTGTTCC
JMFF050E24+ CAATCTTAAGTCCTCTCTCGATGTACTTCATGGCCACAAGCTCCTTNGTCTCCTTGTTCC
____________________________________________________________
consensus CAATCTTAAGTCCTCTCTCGATGTACTTCATGGCCACAAGCTCCTTTGTCTCCTTGTTCC
. : . : . : . : . : . :
JMFF012I21+ TCATAAGCCT
JMFF028B09+ TCATAAGCCT
JMFS119C06+ TCATGAGCCTCGCCACGCCGAAATTCCCGGAACCTATATCCTTAACAAGCTCGTATTTCT
JMFF050E24+ TCATAAGCCTGGCCACACCGAAATTACCAGACCCAATATCCTTAACAAGCCCATATTTCT
JMFF039L08+ TCATAAGCCTGGCCACACCGAAATTACCAGACCCAATATCCTTAACAAGCCCATATTTCT
JMFF012C04+ TCATAAGCCTGGCCACACCGAAATTACCAGACCCAATATCCTTAACAAGCTCATATTTCT
____________________________________________________________
consensus TCATAAGCCTGGCCACACCGAAATTACCAGACCCAATATCCTTAACAAGCTCATATTTCT
. : . : . : . : . : . :
JMFS119C06+ CCATTT
JMFF050E24+ CCATTTTTTCCTTCTAATTTCGCACCTTTTAGCTCAACTACAACGAACTGCAATTTAAAT
JMFF039L08+ CCATTTTTTCCTTCTAATTTCGCACCTTTTAGCTCAACTACAACGAACTGCAATTTAAAT
JMFF012C04+ CCATTTTTTCCTTCTAATTTCGCACCTTTTAGCTCAACTACAACGAACTGCAATTTAAAT
____________________________________________________________
consensus CCATTTTTTCCTTCTAATTTCGCACCTTTTAGCTCAACTACAACGAACTGCAATTTAAAT
. : . : . : . : . : . :
JMFF050E24+ CTGCTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
JMFF039L08+ CTGCTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
JMSF010A14+ CTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
JMFF012C04+ CTGCTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
____________________________________________________________
consensus CTGCTAAAGTTTCAACCTTTAAGCACTACTTAAACTGGAAACAAGAATAATTTTCCACCC
. : . : . : . : . : . :
JMFF050E24+ AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
JMFF039L08+ AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
JMSF010A14+ AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
JMFF012C04+ AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
____________________________________________________________
consensus AGAAGCTCGAATTCGAAAAACCACAACTAAGCAAAACAGAATTTCACCAATTTATAGCTG
. : . : . : . : . : . :
JMFF050E24+ AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
JMFF039L08+ AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
JMSF010A14+ AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
JMFF012C04+ AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
____________________________________________________________
consensus AATCAGGGGGAATCAACAGAACATCCGGAAGTCGGCAAAGGAGAGATTTGGGTTTACAGC
. : . : . : . : . : . :
JMFF050E24+ GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCCACAGAGACTTGA
JMFF039L08+ GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCCACAGAGACTTGA
JMSF010A14+ GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCC
JMFF012C04+ GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCCACAGAGACTTGA
____________________________________________________________
consensus GGATTCCACGATCAGAAGGGAAAAGAATGGTATTTGCAGCTGCTTTCCACAGAGACTTGA
. : . : . : . : . : . :
JMFF050E24+ GAAAAAGCAAAGGAATTTTGAAGATCACGGGTGGGTGATGGGATTGGGAGGAGTATGGGC
JMFF039L08+ GAAAAAGCAAAGGAATTTTGAAGATCACGGGTGGGTGATGGGATTGGGAGGAGTATGGGC
JMFF012C04+ GAAAAAGCAAAGGAATTTTGAAGATCACGGGTGGGTGATGGGATTGGGAGGAGTATGGGC
____________________________________________________________
consensus GAAAAAGCAAAGGAATTTTGAAGATCACGGGTGGGTGATGGGATTGGGAGGAGTATGGGC
. : . : . : . : . : . :
JMFF050E24+ GGTGGCAGAAAGAAAAGATTCCCGGAATTTCAGAGAAGTCTATTATTAGATGAGAACATG
JMFF039L08+ GGTGGCAGAAAGAAAAGATTCCCGGAATTTCAGAGAAGTCTATTATTAGATGAGAACATG
JMFF012C04+ GGTGGCAGAAAGAAAAGATTCCCGGAATTTCAGAGAAGTCTATTATTAGATGAGAACATG
____________________________________________________________
consensus GGTGGCAGAAAGAAAAGATTCCCGGAATTTCAGAGAAGTCTATTATTAGATGAGAACATG
. : . : . : . : . : . :
JMFF050E24+ GAAAGAAAAACCGATGGTCTAATAAAGATAGTGAGAGAAGTGATGAGAAATGAGAATATC
JMFF039L08+ GAAAGAAAAACCGATGGTCTAATAAAGATAGTGAGAGAAGTGATGAGAAATGAGAATATC
JMFF012C04+ GAAAGAAAAACCGATGGTCTAATAAAGATAGTGAGAGAAGTGATGAGAAATGAGAATATC
____________________________________________________________
consensus GAAAGAAAAACCGATGGTCTAATAAAGATAGTGAGAGAAGTGATGAGAAATGAGAATATC