| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011G22 | Sequence | 572 | 001607 (9) | gb|EYU23114.1| | 2e-95 | hypothetical protein MIMGU_mgv1a004585mg [Erythranthe guttata] | 743 | 002541 (10) | dbj|BAF95167.1| | 8e-38 | similar to putative preRNA processing ribonucleoprotein [Ipomoea nil] |
| JMFF011M08 | Sequence | 541 | 001607 (9) | gb|EYU23115.1| | 5e-77 | hypothetical protein MIMGU_mgv1a004585mg [Erythranthe guttata] | 708 | 002541 (10) | dbj|BAF95167.1| | 9e-27 | similar to putative preRNA processing ribonucleoprotein [Ipomoea nil] |
| JMFF027G01 | Sequence | 521 | 001607 (9) | gb|EYU23115.1| | 2e-82 | hypothetical protein MIMGU_mgv1a004585mg [Erythranthe guttata] | 703 | 002541 (10) | dbj|BAF95167.1| | 9e-27 | similar to putative preRNA processing ribonucleoprotein [Ipomoea nil] |
| JMFF030D21 | Sequence | 508 | 001607 (9) | gb|EYU23114.1| | 2e-80 | hypothetical protein MIMGU_mgv1a004585mg [Erythranthe guttata] | 682 | 002541 (10) | dbj|BAF95167.1| | 9e-22 | similar to putative preRNA processing ribonucleoprotein [Ipomoea nil] |
| JMSF006G12 | Sequence | 275 | 001607 (9) | ref|XP_006344769.1| | 3e-27 | PREDICTED: nucleolar protein 56-like [Solanum tuberosum] | 534 | 011247 (2) | ref|XP_009773830.1| | 1e-27 | PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Nicotiana sylvest |
| JMSF014E01 | Sequence | 298 | 001607 (9) | ref|XP_006344769.1| | 4e-34 | PREDICTED: nucleolar protein 56-like [Solanum tuberosum] | 771 | 022489 | ref|XP_006344769.1| | 1e-124 | PREDICTED: nucleolar protein 56-like [Solanum tuberosum] |
| JMSF023I23 | Sequence | 681 | 001607 (9) | ref|XP_011083862.1| | 4e-139 | PREDICTED: nucleolar protein 56-like [Sesamum indicum] | 776 | 002541 (10) | dbj|BAF95167.1| | 9e-56 | similar to putative preRNA processing ribonucleoprotein [Ipomoea nil] |
| JMSF033I24 | Sequence | 653 | 001607 (9) | ref|XP_011083862.1| | 2e-131 | PREDICTED: nucleolar protein 56-like [Sesamum indicum] | 713 | 002541 (10) | dbj|BAF95167.1| | 2e-39 | similar to putative preRNA processing ribonucleoprotein [Ipomoea nil] |
| JMSF052I24 | Sequence | 661 | 001607 (9) | ref|XP_011083862.1| | 9e-117 | PREDICTED: nucleolar protein 56-like [Sesamum indicum] | 823 | 002541 (10) | dbj|BAF95167.1| | 5e-52 | similar to putative preRNA processing ribonucleoprotein [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
JMSF023I23+ G
____________________________________________________________
consensus G
. : . : . : . : . : . :
JMSF033I24+ TTCACAAGTTCTGGGAAATGCCAGGAATACCAT
JMSF023I23+ GCATATAGATAGTTATCATTAATAATCTTCACAAGTTCTGGGAAATGCCAGGAATACCAT
____________________________________________________________
consensus GCATATAGATAGTTATCATTAATAATCTTCACAAGTTCTGGGAAATGCCAGGAATACCAT
. : . : . : . : . : . :
JMSF033I24+ TCTCTGACTCTCATTGAGAAGGTATTTACATCTTTATCAAGAGTATCAAGCAAGAATATT
JMSF023I23+ TCTCTGACTCTCATTGAGAAGGTATTTACATCTTTATCAAGAGTATCAAGCAAGAATATT
JMSF052I24+ AGAAGGTATTTACATCTTTATCAAGAGTATCAAGCAAGAATATT
____________________________________________________________
consensus TCTCTGACTCTCATTGAGAAGGTATTTACATCTTTATCAAGAGTATCAAGCAAGAATATT
. : . : . : . : . : . :
JMSF033I24+ GCTTGAATAACCATATTGTCAACCCGATTAACATTGAACTTGACCTTTGCTCTGCTATAG
JMSF023I23+ GCTTGAATAACCATATTGTCAACCCGATTAACATTGAACTTGACCTTTGCTCTGCTATAG
JMFF011G22+ ACCTTTGCTCTGCTATAG
JMSF052I24+ GCTTGAATAACCATATTGTCAACCCGATTAACATTGAACTTGACCTTTGCTCTGCTATAG
____________________________________________________________
consensus GCTTGAATAACCATATTGTCAACCCGATTAACATTGAACTTGACCTTTGCTCTGCTATAG
. : . : . : . : . : . :
JMSF033I24+ CTGTGGCCCAACCCCAGCTGGGCTTTCTCCAGGTCCCCTGCCTTTAGGTTTTCAATAAAC
JMSF023I23+ CTGTGGCCCAACCCCAGCTGGGCTTTCTCCAGGTCCCCTGCCTTTAGGTTTTCAATAAAC
JMFF011G22+ CTGTGGCCCAACCCCAGCTGGGCTTTCTCCAGGTCCCCTGCCTTTAGGTTTTCAATAAAC
JMFF027G01+ CCCTGCCTTTAGGTTTTCAATAAAC
JMFF030D21+ GGTTTTCAATAAAC
JMSF052I24+ CTGTGGCCCAACCCCAGCTGGGCTTTCTCCAGGTCCCCTGCCTTTAGGTTTTCAATAAAC
JMFF011M08+ C
____________________________________________________________
consensus CTGTGGCCCAACCCCAGCTGGGCTTTCTCCAGGTCCCCTGCCTTTAGGTTTTCAATAAAC
. : . : . : . : . : . :
JMSF033I24+ TTCTCAAAATGCAATCGCACTCCACGCAGAAGCTCTAGAACAAATTCATTGCTTTGGCAA
JMSF023I23+ TTCTCAAAATGCAATCGCACTCCACGCAGAAGCTCTAGAACAAATTCATTGCTTTGGCAA
JMFF011G22+ TTCTCAAAATGCAATCGCACTCCACGCAGAAGCTCTAGAACAAATTCATTGCTTTGGCAA
JMFF027G01+ TTCTCAAAATGCAATCGCACTCCACGCAGAAGCTCTAGAACAAATTCATTGCTTTGGCAA
JMFF030D21+ TTCTCAAAATGCAATCGCACTCCACGCAGAAGCTCTAGAACAAATTCATTGCTTTGGCAA
JMSF052I24+ TTCTCAAAATGCAATCGCACTCCACGCAGAAGCTCTAGAACAAATTCATTGCTTTGGCAA
JMFF011M08+ TTCTCAAAATGCAATCGCACTCCACGCAGAAGCTCTAGAACAAATTCATTGCTTTGGCAA
____________________________________________________________
consensus TTCTCAAAATGCAATCGCACTCCACGCAGAAGCTCTAGAACAAATTCATTGCTTTGGCAA
. : . : . : . : . : . :
JMSF033I24+ GGAATCTTAGTTTCTTCAAATATATGTGATCCAAGCTTGGGCTCTGCAAGCCCTAGACTG
JMSF023I23+ GGAATCTTAGTTTCTTCAAATATATGTGATCCAAGCTTGGGCTCTGCAAGCCCTAGACTG
JMFF011G22+ GGAATCTTAGTTTCTTCAAATATATGTGATCCAAGCTTGGGCTCTGCAAGCCCTAGACTG
JMFF027G01+ GGAATCTTAGTTTCTTCAAATATATGTGATCCAAGCTTGGGCTCTGCAAGCCCTAGACTG
JMFF030D21+ GGAATCTTAGTTTCTTCAAATATATGTGATCCAAGCTTGGGCTCTGCAAGCCCTAGACTG
JMSF052I24+ GGAATCTTAGTTTCTTCAAATATATGTGATCCAAGCTTGGGCTCTGCAAGCCCTAGACTG
JMFF011M08+ GGAATCTTAGTTTCTTCAAATATATGTGATCCAAGCTTGGGCTCTGCAAGCCCTAGACTG
____________________________________________________________
consensus GGAATCTTAGTTTCTTCAAATATATGTGATCCAAGCTTGGGCTCTGCAAGCCCTAGACTG
. : . : . : . : . : . :
JMSF033I24+ AACTTAGCCTTCTTACTATCCTTAACTTTTGGGAGAGTAAGTTCCAGGAAGTTCCTTAGC
JMSF023I23+ AACTTAGCCTTCTTACTATCCTTAACTTTTGGGAGAGTAAGTTCCAGGAAGTTCCTTAGC
JMFF011G22+ AACTTAGCCTTCTTACTATCCTTAACTTTTGGGAGAGTAAGTTCCAGGAAGTTCCTTAGC
JMFF027G01+ AACTTAGCCTTCTTACTATCCTTAACTTTTGGGAGAGTAAGTTCCAGGAAGTTCCTTAGC
JMFF030D21+ AACTTAGCCTTCTTACTATCCTTAACTTTTGGGAGAGTAAGTTCCAGGAAGTTCCTTAGC
JMSF052I24+ AACTTAGCCTTCTTACTATCCTTAACTTTTGGGAGAGTAAGTTCCAGGAAGTTCCTTAGC
JMFF011M08+ AACTTAGCCTTCTTACTATCCTTAACTTTTGGGAGAGTAAGTTCCAGGAAGTTCCTTAGC
____________________________________________________________
consensus AACTTAGCCTTCTTACTATCCTTAACTTTTGGGAGAGTAAGTTCCAGGAAGTTCCTTAGC
. : . : . : . : . : . :
JMSF033I24+ TCATCTGTCATTTGCCCTTCAGAAACGGCGTTGCATTGATTGAGAGCATCCAGGGCGGAC
JMSF023I23+ TCATCTGTCATTTGCCCTTCAGAAACGGCGTTGCATTGATTGAGAGCATCCAGGGCGGAC
JMFF011G22+ TCATCTGTCATTTGCCCTTCAGAAACGGCGTTGCATTGATTGAGAGCATCCAGGGCGGAC
JMFF027G01+ TCATCTGTCATTTGCCCTTCAGAAACGGCGTTGCATTGATTGAGAGCATCCAGGGCGGAC
JMFF030D21+ TCATCTGTCATTTGCCCTTCAGAAACGGCGTTGCATTGATTGAGAGCATCCAGGGCGGAC
JMSF052I24+ TCATCTGTCATTTGCCCTTCAGAAACGGCGTTGCATTGATTGAGAGCATCCAGGGCGGAC
JMSF014E01+ TTCAGAAACGGCGTTGCATTGATTGAGAGCATCCAGGGCGGAC
JMSF006G12+ AGAGCATCCAGGGCGGAC
JMFF011M08+ TCATCTGTCATTTGCCCTTCAGAAACGGCGTTGCATTGATTGAGAGCATCCAGGGCGGAC
____________________________________________________________
consensus TCATCTGTCATTTGCCCTTCAGAAACGGCGTTGCATTGATTGAGAGCATCCAGGGCGGAC
. : . : . : . : . : . :
JMSF033I24+ TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
JMSF023I23+ TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
JMFF011G22+ TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
JMFF027G01+ TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
JMFF030D21+ TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
JMSF052I24+ TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
JMSF014E01+ TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
JMSF006G12+ TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
JMFF011M08+ TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
____________________________________________________________
consensus TCGAAGGGGTTGAAAGCGACGAGCTTCACAACTTTTCCGAAGCGGTTAAGATCCTTGACG
. : . : . : . : . : . :
JMSF033I24+ GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
JMSF023I23+ GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
JMFF011G22+ GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
JMFF027G01+ GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
JMFF030D21+ GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
JMSF052I24+ GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
JMSF014E01+ GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
JMSF006G12+ GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
JMFF011M08+ GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
____________________________________________________________
consensus GAATTCCGGACCGCCTCCGTATTCTGCCCGATTTCGTCCAGGCCGTGGGCGTGGAACAGA
. : . : . : . : . : . :
JMSF033I24+ CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
JMSF023I23+ CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
JMFF011G22+ CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
JMFF027G01+ CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
JMFF030D21+ CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
JMSF052I24+ CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
JMSF014E01+ CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
JMSF006G12+ CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
JMFF011M08+ CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
____________________________________________________________
consensus CCGTACCCGGAGGCCGACTCGTACAGCAAGTAGAGCGCCATGCCAACTGGGTCTCTTTCT
. : . : . : . : . : . :
JMSF033I24+ TCCTCTCCCTTTGCTTCTC
JMSF023I23+ TCCTCTCCCTTTGCTTCTC
JMFF011G22+ TCCTCTCCCTTTGCTTCTCTTGGTGATGAGGCGGGGAAGAGAGGATACTAGGGTTTAAGG
JMFF027G01+ TCCTCTCCCTTTGCTTCTCTTGGTGATGAGGCGGGGAAGAGAGGATACTAGGGTTTAAGG
JMFF030D21+ TCCTCTCCCTTTGCTTCTCTTGGTGATGAGGCGGGGAAGAGAGGATACTAGGGTTTAAGG
JMSF052I24+ TCCTCTCCCTTTGCTTCTCTTGGTGATGAGGCGGGGAAGAGAGGATACTAGGGTTTAAGG
JMSF014E01+ TCCTCTCCCTTTGCTTCTCTTGGTGATGAGGCGGGGAAGAGAGGATACTAGGGTTTAAGG
JMSF006G12+ TCCTCTCCCTTTGCTTCTCTTGGTGATGAGGCGGGGAAGAGAGGATACTAGGGTTTAAGG
JMFF011M08+ TCCTCTCCCTTTGCTTCTCTTGGTGATGAGGCGGGGAAGAGAGGATACTAGGGTTTAAGG
____________________________________________________________
consensus TCCTCTCCCTTTGCTTCTCTTGGTGATGAGGCGGGGAAGAGAGGATACTAGGGTTTAAGG
. : . : . : . : . : . :
JMFF011G22+ GTTTTTGTGTCGCC
JMFF027G01+ GTTTTTGTGTCGCC
JMFF030D21+ GTTTTTGTGTCG
JMSF052I24+ GTTTTTGTGTCGCC
JMSF014E01+ GTTTTTGTGTCGCC
JMSF006G12+ GTTTTTGTGTCGCC
JMFF011M08+ GTTTTTGTGTCGCCACGGGCCACGTTCTATTCTATTCTATTATATATGCTGATGAATTCT
____________________________________________________________
consensus GTTTTTGTGTCGCCACGGGCCACGTTCTATTCTATTCTATTATATATGCTGATGAATTCT