Contig 001601:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011D22Sequence541001601 (2)ref|XP_009617167.1|4e-77PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nico712003970 (2)ref|XP_009617167.1|7e-65PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nico
JMSF006G13Sequence435001601 (2)ref|XP_009617167.1|3e-55PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nico528003970 (2)ref|XP_009617167.1|2e-41PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nico

Alignment

This contig is upended


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JMFF011D22+                                                                      C
                      ____________________________________________________________
consensus                                                                        C
 
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JMFF011D22+           CTATGACAGTATTCTACCCCAGCAATTATCTGCTGGAAGAAACTACGAGATTCATCCTCT
                      ____________________________________________________________
consensus             CTATGACAGTATTCTACCCCAGCAATTATCTGCTGGAAGAAACTACGAGATTCATCCTCT
 
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JMSF006G13+                                      TCAAATAGCTCTCCAGACTTCACATACTCCATG
JMFF011D22+           TGTAATCTGCCTTTTTCTACAATATAATCAAATAGCTCTCCAGACTTCACATACTCCATG
                      ____________________________________________________________
consensus             TGTAATCTGCCTTTTTCTACAATATAATCAAATAGCTCTCCAGACTTCACATACTCCATG
 
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JMSF006G13+           ACAACAAATATGTCAGTTGGTGTCTCTATGACCTCATAGAGCCGTATAACATGTGGGTGC
JMFF011D22+           ACAACAAATATGTCAGTTGGTGTCTCTATGACCTCATAGAGCCGTATAACATGTGGGTGC
                      ____________________________________________________________
consensus             ACAACAAATATGTCAGTTGGTGTCTCTATGACCTCATAGAGCCGTATAACATGTGGGTGC
 
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JMSF006G13+           ACAAATAATCTACATATCTTTGTTTCCCTTCTTAATTTTTCCTCCATGTCAGGGCTCCTC
JMFF011D22+           ACAAATAATCTACATATCTTTGTTTCCCTTCTTAATTTTTCCTCCATGTCAGGGCTCCTC
                      ____________________________________________________________
consensus             ACAAATAATCTACATATCTTTGTTTCCCTTCTTAATTTTTCCTCCATGTCAGGGCTCCTC
 
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JMSF006G13+           ATTTTCCTGCGGTTAAGTATCTTGATAGCCACTTTGTGTCCAGTCAGCAAATGTTCAGCA
JMFF011D22+           ATTTTCCTGCGGTTAAGTATCTTGATAGCCACTTTGTGTCCAGTCAGCAAATGTTCAGCA
                      ____________________________________________________________
consensus             ATTTTCCTGCGGTTAAGTATCTTGATAGCCACTTTGTGTCCAGTCAGCAAATGTTCAGCA
 
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JMSF006G13+           ATTTTCACCTTACCAAATGAACCACGGCCAAGAGTTTTTCCAATCCTGTAATTTCTTAGA
JMFF011D22+           ATTTTCACCTTACCAAATGAACCATGGCCAAGAGTTTTTCCAATCCTGTAATTTCTTAGA
                      ____________________________________________________________
consensus             ATTTTCACCTTACCAAATGAACCATGGCCAAGAGTTTTTCCAATCCTGTAATTTCTTAGA
 
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JMSF006G13+           GGGTTATCACTAGCACCACCTCCTCTGTTATCCATTTACACCACCCGATTGAACACTGAA
JMFF011D22+           GGGTTATCACTAGCACCACCTCCTCTGTTATCCATTTACACCACCCGATTGAACACTGAA
                      ____________________________________________________________
consensus             GGGTTATCACTAGCACCACCTCCTCTGTTATCCATTTACACCACCCGATTGAACACTGAA
 
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JMSF006G13+           AAATGGATCTCAAACACCGAGCAATGGAAAGTCCGCTAGAGAGAGAGGGAGTGAGAACTT
JMFF011D22+           AAATGGATCTCAAACACCGAGCAATGGAAAGTCCGCTAGAGAGAGAGGGAGTGAGAACTT
                      ____________________________________________________________
consensus             AAATGGATCTCAAACACCGAGCAATGGAAAGTCCGCTAGAGAGAGAGGGAGTGAGAACTT
 
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JMSF006G13+           CGAGGTAGCAAAATAAAATCTAAAAAGTAAAAAAAATAATT                   
JMFF011D22+           CGAGGTAGCAAAATAAAATCTAAAAAGTAAAAAAAATAATTAAAAGAAGTCCGAAATCGT
                      ____________________________________________________________
consensus             CGAGGTAGCAAAATAAAATCTAAAAAGTAAAAAAAATAATTAAAAGAAGTCCGAAATCGT