Contig 001598:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF050H17+                                                  CGAAGGTGCACCACCCGCAGT
                      ____________________________________________________________
consensus                                                    CGAAGGTGCACCACCCGCAGT
 
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JMSF050H17+           AGTGATCGGACGGCGCGTTTTGCGGGATGTTCACGACCGGATAACATAATTCCCGACAAC
                      ____________________________________________________________
consensus             AGTGATCGGACGGCGCGTTTTGCGGGATGTTCACGACCGGATAACATAATTCCCGACAAC
 
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JMSF050H17+           CTTTTCTCAAAACCATGTTTTGAAAACTCTCGTCCTCGCATTCACGTTGTACTCCCATTT
                      ____________________________________________________________
consensus             CTTTTCTCAAAACCATGTTTTGAAAACTCTCGTCCTCGCATTCACGTTGTACTCCCATTT
 
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JMSF050H17+           TCCCACAAACAGTGTCCATGGCCTTNTGGTAAACGTCGCTTCCGAATAACTCAAGCCCGT
                      ____________________________________________________________
consensus             TCCCACAAACAGTGTCCATGGCCTTNTGGTAAACGTCGCTTCCGAATAACTCAAGCCCGT
 
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JMSF050H17+           GGACTTCGCACCATTCCCGGAGAACATACGGCGGAGTTTTGATAGAAGCGGACCAGTTCA
                      ____________________________________________________________
consensus             GGACTTCGCACCATTCCCGGAGAACATACGGCGGAGTTTTGATAGAAGCGGACCAGTTCA
 
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JMSF050H17+           CGGCTGAGCCGCCGCCCACGGTGGAGCCGGCGAGGAGCACCATATCCAAATCCTTCGTCA
                      ____________________________________________________________
consensus             CGGCTGAGCCGCCGCCCACGGTGGAGCCGGCGAGGAGCACCATATCCAAATCCTTCGTCA
 
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JMSF050H17+           TTAACAGTCCCCCGCCTAAGAACATTTTATCCATAGAAGGCCCTTCAAGGAGCGACAGAT
JMSF048A14+                          CTAAGAACATTTTATCCATAGAAGGCCCTTCAAGGAGCGACAGAT
                      ____________________________________________________________
consensus             TTAACAGTCCCCCGCCTAAGAACATTTTATCCATAGAAGGCCCTTCAAGGAGCGACAGAT
 
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JMSF050H17+           TGGTTCTCGCATAATAGTTCCCTTTCTCCAAGACGAGAACTTTATAGCCGGCGGTGGCAA
JMSF048A14+           TGGTTCTCGCATAATAGTTCCCTTTCTCCAAGACGAGAACTTTATAGCCGGCGGTGGCAA
                      ____________________________________________________________
consensus             TGGTTCTCGCATAATAGTTCCCTTTCTCCAAGACGAGAACTTTATAGCCGGCGGTGGCAA
 
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JMSF050H17+           GAACGCCGGAAATAACCCCGCCGCCGCATCCGGAGCCGACCACCACCGCATCGCACTCGA
JMSF048A14+           GAACGCCGGAAATAACCCCGCCGCCGCATCCGGAGCCGACCACCACCGCATCGCACTCGA
                      ____________________________________________________________
consensus             GAACGCCGGAAATAACCCCGCCGCCGCATCCGGAGCCGACCACCACCGCATCGCACTCGA
 
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JMSF050H17+           TGACGAAAGACGGCCCCGGGGGCTTCGGTTTTGCGACGGAACAACCTAGTTTCGTCAGCC
JMSF048A14+           TGACGAAAGACGGCCCCGGGGGCTTCGGTTTTGCGACGGAACAACCTAGTTTCGTCAGCC
                      ____________________________________________________________
consensus             TGACGAAAGACGGCCCCGGGGGCTTCGGTTTTGCGACGGAACAACCTAGTTTCGTCAGCC
 
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JMSF050H17+           TGTTGAAGACATGTTCTTCTGGTAGATTCAGATCAATGATTCCTTTGTACAGAGGTCCAA
JMSF048A14+           TGTTGAAGACATGTTCTTCTGGTAGATTCAGATCAATGATTCCTTTGTACAGAGGTCCAA
                      ____________________________________________________________
consensus             TGTTGAAGACATGTTCTTCTGGTAGATTCAGATCAATGATTCCTTTGTACAGAGGTCCAA
 
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JMSF050H17+           ACAGCAATTCTTCGATA                                           
JMSF048A14+           ACAGCAATTCTTCGATATCATCTTCATGATCGTGATGCTTCTGTTTCTTTTGTTTTTCAG
JMFF029G05+                            TCATCTTCATGATCGTGATGCTTCTGTTTCTTTTGTTTTTCAG
JMFF034K18+                                                                   TCAG
JMFF010B16+                            TCATCTTCATGATCGTGATGCTTCTGTTTCTTTTGTTTTTCAG
                      ____________________________________________________________
consensus             ACAGCAATTCTTCGATATCATCTTCATGATCGTGATGCTTCTGTTTCTTTTGTTTTTCAG
 
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JMSF048A14+           AAATGGAAGGGTCGGGACCACAATA-CCCTATTGCTTTCCAACTTGGGTTATCCCCCTTA
JMFF029G05+           AAATGGAAGGGTCGGGACCACAATACCCCTATTGCTTTCCAACTTGGGTTATCCCCCTTA
JMFF034K18+           AAATGGAAGGGTCGGGACCACAATA-CCCTATTGCTTTCCAACTTGGGTTATCCCCCTTA
JMFF010B16+           AAATGGAAGGGTCGGGACCACAATACCCCTATTGCTTTCCAACTTGGGTTATCCCCCTTA
                      ____________________________________________________________
consensus             AAATGGAAGGGTCGGGACCACAATACCCCTATTGCTTTCCAACTTGGGTTATCCCCCTTA
 
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JMSF048A14+           TCATCAACCGAAGTGAAGAATACGAGGAGAACCAAAGCTTTCATGGCCGTGAAAAAATTT
JMFF029G05+           TCATCAACCGAAGTGAAGAATACGAGGAGAACCAAAGCTTTCATGGCCGTGAAAAAATTT
JMFF034K18+           TCATCAACCGAAGTGAAGAATACGAGGAGAACCAAAGCTTTCATGGCCGTGAAAAAATTT
JMFF010B16+           TCATCAACCGAAGTGAAGAATACGAGGAGAACCAAAGCTTTCATGGCCGTGAAAAAATTT
                      ____________________________________________________________
consensus             TCATCAACCGAAGTGAAGAATACGAGGAGAACCAAAGCTTTCATGGCCGTGAAAAAATTT
 
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JMSF048A14+           CTGATGAATTGCAGACTGCTGGTGGCCCATGAATGAACTATACGTTCTCTCTTCTTCTGA
JMFF029G05+           CTGATGAATTGCAGACTGCTGGTGGCCCATGAATGAACTATACGTTCTCTCTTCTTCTGA
JMFF034K18+           CTGATGAATTGCAGACTGCTGGTGGCCCATGAATGAACTATACGTTCTCTCTTCTTCTGA
JMFF010B16+           CTGATGAATTGCAGACTGCTGGTGGCCCATGAATGAACTATACGTTCTCTCTTCTTCTGA
                      ____________________________________________________________
consensus             CTGATGAATTGCAGACTGCTGGTGGCCCATGAATGAACTATACGTTCTCTCTTCTTCTGA
 
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JMSF048A14+           GAAATCTCAGGGAAGCGTAGCAAAAAGGGAAACTGGGTTGACAAGCTTCCCTTTCCACAC
JMFF029G05+           GAAATCTCAGGGAAGCGTAGCAAAAAGGGAAACTGGGTTGACAAGCTTCCCTTTCCACAC
JMFF034K18+           GAAATCTCAGGGAAGCGTAGCAAAAAGGGAAACTGGGTTGACAAGCTTCCCTTTCCACAC
JMFF010B16+           GAAATCTCAGGGAAGCGTAGCAAAAAGGGAAACTGGGTTGACAAGCTTCCCTTTCCACAC
                      ____________________________________________________________
consensus             GAAATCTCAGGGAAGCGTAGCAAAAAGGGAAACTGGGTTGACAAGCTTCCCTTTCCACAC
 
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JMSF048A14+           AGTAACAATGTTCCAATCCTCGTTGACAGAAACCATAGCAGCAGCAGCAATGAATTCAGC
JMFF029G05+           AGTAACAATGTTCCAATCCTCGTTGACAGAAACCATAGCAGCAGCAGCAATGAATTCAGC
JMFF034K18+           AGTAACAATGTTCCAATCCTCGTTGACAGAAACCATAGCAGCAGCAGCAATGAATTCAGC
JMFF010B16+           AGTAACAATGTTCCAATCCTCGTTGACAGAAACCATAGCAGCAGCAGCAATGAATTCAGC
                      ____________________________________________________________
consensus             AGTAACAATGTTCCAATCCTCGTTGACAGAAACCATAGCAGCAGCAGCAATGAATTCAGC
 
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JMSF048A14+           TTAGGATGTTTCATTCTCTGGTTTATAACCCACGCCACCTGG                  
JMFF029G05+           TTAGGATGTTTCATTCTCTGGTTTATAACCCACGCCACCTGGTGGGGAGTTCCGGTGGAG
JMFF034K18+           TTAGGATGTTTCATTCTCTGGTTTATAACCCACGCCACCTGGTGGGGAGTTCCGGTGGAG
JMFF010B16+           TTAGGATGTTTCATTCTCTGGTTTATAACCCACGCCACCTGGTGGGGAGTTCCGGTGGAG
                      ____________________________________________________________
consensus             TTAGGATGTTTCATTCTCTGGTTTATAACCCACGCCACCTGGTGGGGAGTTCCGGTGGAG
 
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JMFF029G05+           GCGGCTGAAGTTTGGAAGAAATTAGTGACAGATGCATCTGTGGTTTCTGGAAGAGCTTCA
JMFF034K18+           GCGGCTGAAGTTTGGAAGAAATTAGTGACAGATGCATCTGTGGTTTCTGGAAGAGCTTCA
JMFF010B16+           GCGGCTGAAGTTTGGAAGAAATTAGTGACAGATGCATCTGTGGTTTCTGGAAGAGCTTCA
                      ____________________________________________________________
consensus             GCGGCTGAAGTTTGGAAGAAATTAGTGACAGATGCATCTGTGGTTTCTGGAAGAGCTTCA
 
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JMFF029G05+           TTAATGGCGGGCAGAAAGGTATTGCATAAAGCACTCAGAGTCTCCATCTGTGAAGGAGAC
JMFF034K18+           TTAATGGCGGGCAGAAAGGTATTGCATAAAGCACTCAGAGTCTCCATCTGTGAAGGAGAC
JMFF010B16+           TTAATGGCGGGCAGAAAGGTATTGCATAAAGCACTCAGAGTCTCCATCTGTGAAGGAGAC
                      ____________________________________________________________
consensus             TTAATGGCGGGCAGAAAGGTATTGCATAAAGCACTCAGAGTCTCCATCTGTGAAGGAGAC
 
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JMFF029G05+           AGTGTTTTGGTAGCGGTATTGTTCTCCATTTTTCTGTGAAGTGAATATTAATTCTGCATC
JMFF034K18+           AGTGTTTTGGTAGCGGTATTGTTCTCCATTTTTCTGTGAAGTGAATATTAATTCTGCATC
JMFF010B16+           AGTGTTTTGGTAGCGGTATTGTTCTCCATTTTTCTGTGAAGTGAATATTAATTCTGCATC
                      ____________________________________________________________
consensus             AGTGTTTTGGTAGCGGTATTGTTCTCCATTTTTCTGTGAAGTGAATATTAATTCTGCATC