Contig 001597:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS141C08+                                                                CTATCAC
                      ____________________________________________________________
consensus                                                                  CTATCAC
 
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JMFS141C08+           CAAAAAATGCTGCCTTGTAGGGCTACCGACAACCTTGTTCAACTTTGAAAATGTGCTGGT
                      ____________________________________________________________
consensus             CAAAAAATGCTGCCTTGTAGGGCTACCGACAACCTTGTTCAACTTTGAAAATGTGCTGGT
 
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JMFS141C08+           AAGGTCATCAACGTCAGAATATGATGCTAACATTTCACCCTCTTCTTGTTCCAACTGATA
                      ____________________________________________________________
consensus             AAGGTCATCAACGTCAGAATATGATGCTAACATTTCACCCTCTTCTTGTTCCAACTGATA
 
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JMFS141C08+           CTCTACATCATCAAAACCAGGTGGAGGTAGATCATCCTCTTCGTCTTCTAATCCCCCCAA
                      ____________________________________________________________
consensus             CTCTACATCATCAAAACCAGGTGGAGGTAGATCATCCTCTTCGTCTTCTAATCCCCCCAA
 
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JMFS141C08+           TTCAACTTCTTCAACTACATCATTACCAAAGAATGCATACTGTGATGCATCGAATAGAGC
                      ____________________________________________________________
consensus             TTCAACTTCTTCAACTACATCATTACCAAAGAATGCATACTGTGATGCATCGAATAGAGC
 
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JMFS141C08+           ATTTCCTGATGAATTAGAATCAACTTGTTTGAGATCTTGAGGATTGCTGGAGCATTCAAT
                      ____________________________________________________________
consensus             ATTTCCTGATGAATTAGAATCAACTTGTTTGAGATCTTGAGGATTGCTGGAGCATTCAAT
 
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JMFS141C08+           ACCACCCGGACCCTCAAATCCGTCCATTTTCAACTCTTGAACAGAACTAAAAACCCAGAG
JMFF009P20+                                                                      G
                      ____________________________________________________________
consensus             ACCACCCGGACCCTCAAATCCGTCCATTTTCAACTCTTGAACAGAACTAAAAACCCAGAG
 
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JMFS141C08+           AATTATCCAGAAAACAAAATATAATTAATTATTTCCTATTCGAAATTTACAGAAACCCAA
JMFF009P20+           AATTATCCAGAAAACAAAATATAATTAATTATTTCCTATTCGAAATTTACAGAAACCCAA
                      ____________________________________________________________
consensus             AATTATCCAGAAAACAAAATATAATTAATTATTTCCTATTCGAAATTTACAGAAACCCAA
 
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JMFS141C08+           AATCTTCCTCTTAAACTAGCAAAAAGCAAAACCCTCGTAAAAGGTTTACAAGAGAAATGA
JMSF009G15+                    CTTAAACTAGCAAAAAGCAAAACCCTCGTAAAAGGTTTACAAGAGAAATGA
JMFF009P20+           AATCTTCCTCTTAAACTAGCAAAAAGCAAAACCCTCGTAAAAGGTTTACAAGAGAAATGA
                      ____________________________________________________________
consensus             AATCTTCCTCTTAAACTAGCAAAAAGCAAAACCCTCGTAAAAGGTTTACAAGAGAAATGA
 
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JMFS141C08+           AAACTCCATCCTCAACAATGAAACTTCGTGCGAAAACAAAAAAAGGGGCATGAGGAAAAT
JMSF009G15+           AAACTCCATCCTCAACAATGAAACTTCGTGCGAAAACAAAAAAAGGGGCATGAGGAAAAT
JMFF009P20+           AAACTCCATCCTCAACAATGAAACTTCGTGCGAAAACAAAAAAAGGGGCATGAGGAAAAT
                      ____________________________________________________________
consensus             AAACTCCATCCTCAACAATGAAACTTCGTGCGAAAACAAAAAAAGGGGCATGAGGAAAAT
 
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JMFS141C08+           GAATCTGGAAAGGTCAAAGCTAAAACCTAGAAAGAGAGAGAAAAGGGAGATGAAAGAAAC
JMSF009G15+           GAATCTGGAAAGGTCAAAGCTAAAACCTAGAAAGAGAGAGAAAAGGGAGATGAAAGAAAC
JMFF009P20+           GAATCTGGAAAGGTCAAAGCTAAAACCTAGAAAGAGAGAGAAAAGGGAGATGAAAGAAAC
                      ____________________________________________________________
consensus             GAATCTGGAAAGGTCAAAGCTAAAACCTAGAAAGAGAGAGAAAAGGGAGATGAAAGAAAC
 
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JMFS141C08+           CCCTCGCCGA                                                  
JMSF009G15+           CCCTCGCCGATAAATTCTAGGGTTTCTGATGAGCGAAGATCAGTACGGAGTATGTTAAAT
JMFF009P20+           CCCTCGCCGATAAATTCTAGGGTTTCTGATGAGCGAAGATCAGTACGGAGTATGTTAAAT
                      ____________________________________________________________
consensus             CCCTCGCCGATAAATTCTAGGGTTTCTGATGAGCGAAGATCAGTACGGAGTATGTTAAAT
 
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JMSF009G15+           AGGTGTAGAATTCATTGGTAGGAGATACAAAGGAGACAGAAATGGGAAATATTTCATATT
JMFF009P20+           AGGTGTAGAATTCATTGGTAGGAGATACAAAGGAGACAGAAATGGGAAATATTTCATATT
                      ____________________________________________________________
consensus             AGGTGTAGAATTCATTGGTAGGAGATACAAAGGAGACAGAAATGGGAAATATTTCATATT
 
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JMSF009G15+           TTTGTGACTGCTGGAAAATGAAATTCAGCC                              
JMFF009P20+           TTTGTGACTGCTGGAAAATGAAATTCAGCCCTTGGTACAGGATAACGATTCAACCCTATA
                      ____________________________________________________________
consensus             TTTGTGACTGCTGGAAAATGAAATTCAGCCCTTGGTACAGGATAACGATTCAACCCTATA
 
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JMFF009P20+           ATATACTACTAATAAAAATAAACAATATTTAAATTTTAAATAATTTCGAAAATAACTTCT
                      ____________________________________________________________
consensus             ATATACTACTAATAAAAATAAACAATATTTAAATTTTAAATAATTTCGAAAATAACTTCT
 
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JMFF009P20+           TTTGTTTTTTCAAAAAGTGTATGAAATTTATGGAGAATCAACAGAGCTAAAAGCATGACC
                      ____________________________________________________________
consensus             TTTGTTTTTTCAAAAAGTGTATGAAATTTATGGAGAATCAACAGAGCTAAAAGCATGACC