| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009H06 | Sequence | 594 | 001594 (6) | emb|CDO98490.1| | 2e-87 | unnamed protein product [Coffea canephora] | 687 | 001594 (6) | gb|EYU41279.1| | 1e-74 | hypothetical protein MIMGU_mgv1a015382mg [Erythranthe guttata] |
| JMFF036A05 | Sequence | 248 | 001594 (6) | ref|XP_006600791.1| | 7e-06 | PREDICTED: protein Dr1 homolog isoform X3 [Glycine max] | 503 | 001594 (6) | gb|EYU41279.1| | 7e-22 | hypothetical protein MIMGU_mgv1a015382mg [Erythranthe guttata] |
| JMFF038P18 | Sequence | 520 | 001594 (6) | ref|XP_009792100.1| | 7e-74 | PREDICTED: protein Dr1 homolog [Nicotiana sylvestris] | |||||
| JMFN020D23 | Sequence | 305 | 001594 (6) | emb|CDO98490.1| | 5e-59 | unnamed protein product [Coffea canephora] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF009H06- AGCCTATGTTGCAACTAACATCAA
____________________________________________________________
consensus AGCCTATGTTGCAACTAACATCAA
. : . : . : . : . : . :
rJMFF036A05- CCAGATTTANATTGATGCTTAGATGAACTGAGTTCANGCAAGAGGAATACCCCTTTGGCA
rJMFF009H06- CCAGATTTAGATTGATGCTTAGATGAACTGAGTTCAGGCAAGAGGAATACCCCTTTGGCA
____________________________________________________________
consensus CCAGATTTAGATTGATGCTTAGATGAACTGAGTTCAGGCAAGAGGAATACCCCTTTGGCA
. : . : . : . : . : . :
rJMFF036A05- CTTNCNCTGATACACCAAAGTTCCATGGCAAAACACTAACTACATAAACATATANACATA
rJMFF009H06- CTTACACTGATACACCAAAGTTCCATGGCAAAACACTAACTACATAAACATATAGACATA
____________________________________________________________
consensus CTTACACTGATACACCAAAGTTCCATGGCAAAACACTAACTACATAAACATATAGACATA
. : . : . : . : . : . :
rJMFF036A05- AATTCATAAAGTACAANTAANGTCAAAAAGAGGGGNAGGCTANCTGGGAGATTTCTGTAC
rJMFF009H06- AATTCATAAAGTACAAGTAAGGTCAAAAAGAGGGGCAGGCTAGCTAAGAGATTTCTGTAC
____________________________________________________________
consensus AATTCATAAAGTACAAGTAAGGTCAAAAAGAGGGGCAGGCTAGCTGGGAGATTTCTGTAC
. : . : . : . : . : . :
rJMFF036A05- ATGATNNTGCNAGACNGAATCCTAATAACTATGANNCAACAGATGATCTTGCCTAAACCT
rJMFF009H06- ATGATAATGCAAGACAGAATCCTAATAACTATGAAGCAACAGATGATCTTGCCTAAACCT
____________________________________________________________
consensus ATGATAATGCAAGACAGAATCCTAATAACTATGAAGCAACAGATGATCTTGCCTAAACCT
. : . : . : . : . : . :
rJMFF036A05- ANNGATGGAGGNGTACATACGTTNGCAGNTTATTTATGTTCCGGCTCCGGGTCTGATTGT
rJMFF009H06- AAAGATGGAGGTGTACATACGTTAGCAGTTTATTTATGTTCCGGCTCCGGGTCTGATTGT
____________________________________________________________
consensus AAAGATGGAGGTGTACATACGTTAGCAGTTTATTTATGTTCCGGCTCCGGGTCTGATTGT
. : . : . : . : . : . :
rJMFF036A05- NTGGGGACCANAATGCCGNTATTCATCCTTGTTCNTGCTTCTGCNAACATCCTCTGNTGC
JMFN020D23+ CCGTTATTCATCCTTGTTCGTGCTTCTGCAAACATCCTCTGTTGC
rJMFF009H06- TTGGGGACCACAATGCCGTTATTCATCCTTGTTCGTGCTTCTGCAAACATCCTCTGTTGC
JMFF009H06+ TATTCATCCTTGTTCGTGCTTCTGCAAACATCCTCTGTTGC
____________________________________________________________
consensus TTGGGGACCACAATGCCGTTATTCATCCTTGTTCGTGCTTCTGCAAACATCCTCTGTTGC
. : . : . : . : . : . :
rJMFF036A05- TCANCCAACGCTTCTTCTTCNGTCATTTNNNCTACATTGTTCCACTCCCCNGNCCTGACN
JMFN020D23+ TCAGCCAACGCTTCTTCTTCGGTCATTTCAGCTACATTGTTCCACTTCCCAGCCCTGACG
rJMFF009H06- TCAGCCAACGCTTCTTCTTCGGTCATTTCAGCTACATTGTTCCACTCCCCAGCCCTGACG
JMFF038P18+ GGTCATTTCAGCTACATTGTTCCACTTCCCAGCCCTGACG
JMFF009H06+ TCAGCCAACGCTTCTTCTTCGGTCATTTCAGCTACATTGTTCCACTCCCCAGCCCTGACG
____________________________________________________________
consensus TCAGCCAACGCTTCTTCTTCGGTCATTTCAGCTACATTGTTCCACTCCCCAGCCCTGACG
. : . : . : . : . : . :
rJMFF036A05- GNATCCATGGNTTCAAGCCTGTGCTGTTCATACGCAGCATAAACTTCTTCAATATAATCC
JMFN020D23+ GTATCCATGGTTTCAAGCCTGTGCTGTTCATACGCAGCATAAACTTCTTCAATATAATCC
rJMFF009H06- GTATCCATGGTTTCAAGCCTGTGCTGTTCATACGCAGCATAAACTTCTTCAATATAATCC
JMFF038P18+ GTATCCATGGTTTCAAGCCTGTGCTGTTCATACGCAGCATAAACTTCTTCAATATAATCC
JMFF009H06+ GTATCCATGGTTTCAAGCCTGTGCTGTTCATACGCAGCATAAACTTCTTCAATATAATCC
____________________________________________________________
consensus GTATCCATGGTTTCAAGCCTGTGCTGTTCATACGCAGCATAAACTTCTTCAATATAATCC
. : . : . : . : . : . :
rJMFF036A05- CCAAAGC
JMFN020D23+ CCAAAGCCTAGGACCTCGAGGGCCTTGAGCACATGCTCAGGAGCAATTGTTCGTCTCTCT
rJMFF009H06- CCAAAGCCTAGGACCTCGAGGGCCTTGAGCACATGCTCAGGAGCAATTGTTCGTCTCTCT
JMFF038P18+ CCAAAGCCTAGGACCTCGAGGGCCTTGAGCACATGCTCAGGAGCAATTGTTCGTCTCTCT
JMFF009H06+ CCAAAGCCTAGGACCTCGAGGGCCTTGAGCACATGCTCAGGAGCAATTGTTCGTCTCTCT
____________________________________________________________
consensus CCAAAGCCTAGGACCTCGAGGGCCTTGAGCACATGCTCAGGAGCAATTGTTCGTCTCTCT
. : . : . : . : . : . :
JMFN020D23+ TCTTTATTACAAACTTCATTTGATTCTGATGATATTAGATTAATAAATTCTACACAACAT
rJMFF009H06- TCTTTATTACAAACTTCATTTGATTCTGATGATATTAGATTAATAAATTCTACACAACAT
JMFF038P18+ TCTTTATTACAAACTTCATTTGATTCTGATGATATTAGATTAATAAATTCTACACAACAT
JMFF009H06+ TCTTTATTACAAACTTCATTTGATTCTGATGATATTAGATTAATAAATTCTACACAACAT
____________________________________________________________
consensus TCTTTATTACAAACTTCATTTGATTCTGATGATATTAGATTAATAAATTCTACACAACAT
. : . : . : . : . : . :
JMFN020D23+ TCAA
rJMFF009H06- TCAATTAACAGATCCTGAGCATCTCGAGCAACACGAACATCTGGTGGTAGCATCTCTTTA
JMFF038P18+ TCAATTAACAGATCCTGAGCATCTCGAGCAACACGAACATCTGGTGGTAGCATCTCTTTA
JMFF036A05+ TCTTTA
JMFF009H06+ TCAATTAACAGATCCTGAGCATCTCGAGCAACACGAACATCTGGTGGTAGCATCTCTTTA
____________________________________________________________
consensus TCAATTAACAGATCCTGAGCATCTCGAGCAACACGAACATCTGGTGGTAGCATCTCTTTA
. : . : . : . : . : . :
rJMFF009H06- ATA
JMFF038P18+ ATAATTTTTGTCATAGTTGCTTTGGGAAGCGAAGCATCCTCTTTCGATTTACCAACGATG
JMFF036A05+ ATAATTTTTGTCATAGTTGCTTTGGGAAGCGAAGCATCCTCTTTCGATTTACCAACGATG
JMFF009H06+ ATAATTTTTGTCATAGTTGCTTTGGGAAGCGAAGCATCCTCTTTCGATTTACCAACGATG
____________________________________________________________
consensus ATAATTTTTGTCATAGTTGCTTTGGGAAGCGAAGCATCCTCTTTCGATTTACCAACGATG
. : . : . : . : . : . :
JMFF038P18+ TCCATCGATTCCATCTTATCCCTTGAAAAAAATCTGATTCAGAATCAAACTAACAAAGAT
JMFF036A05+ TCCATCGATNCCATCTTATCCCTTGAAAAANATCTGATTCAGAATCAAACTAACAAAGAT
JMFF009H06+ TCCATCGATTCCATCTTATCCCTTGAAAAAAATCTGATTCAGAATCAAACTAACAAAGAT
____________________________________________________________
consensus TCCATCGATTCCATCTTATCCCTTGAAAAAAATCTGATTCAGAATCAAACTAACAAAGAT
. : . : . : . : . : . :
JMFF038P18+ CTTACAAAAACTAGAAGATCGGACAGGAGAATGGAAAAAATTAAAAATCCGGCAAAGGTT
JMFF036A05+ CTTACAAAAACTAGAAGATCGGACAGGAGAATGGAAAAAATTAAAAATCCGGCAAAGGTT
JMFF009H06+ CTTACAAAAACTAGAAGATCGGACAGGAGAATGGAAAAAATTAAAAATCCGGCAAAGGTT
____________________________________________________________
consensus CTTACAAAAACTAGAAGATCGGACAGGAGAATGGAAAAAATTAAAAATCCGGCAAAGGTT
. : . : . : . : . : . :
JMFF038P18+ CGGCCGATTAGAGGAGAAGTAGCAGTGGTTGCCGGTGGTGGTGCAGGTGATGGTGAATAT
JMFF036A05+ CGGCCGATTAGAGGAGAAGTAGCAGTGGTTGCCGGTGGTGGTGCAGGTGATGGTGAATAT
JMFF009H06+ CGGCCGATTAGAGGAGAAGTAGCAGTGGTTGCCGGTGGTGGTGCAGGTGATGGTGAATAT
____________________________________________________________
consensus CGGCCGATTAGAGGAGAAGTAGCAGTGGTTGCCGGTGGTGGTGCAGGTGATGGTGAATAT